FFCP PHASE1:Hg19::chr5:78810346..78810363,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!1.75e-13!140;CL:0002057!2.50e-11!42;CL:0000860!4.89e-10!45;CL:0000037!1.02e-09!172;CL:0000566!1.02e-09!172;CL:0002087!1.38e-09!119;CL:0002031!1.74e-09!124;CL:0000988!6.23e-09!182;CL:0002032!2.74e-08!165;CL:0000837!2.74e-08!165;CL:0000766!4.24e-08!76;CL:0000557!9.28e-07!71 | |ontology_enrichment_celltype=CL:0000738!1.75e-13!140;CL:0002057!2.50e-11!42;CL:0000860!4.89e-10!45;CL:0000037!1.02e-09!172;CL:0000566!1.02e-09!172;CL:0002087!1.38e-09!119;CL:0002031!1.74e-09!124;CL:0000988!6.23e-09!182;CL:0002032!2.74e-08!165;CL:0000837!2.74e-08!165;CL:0000766!4.24e-08!76;CL:0000557!9.28e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.70e-13;33!CL:0002057;1.70e-13;33!CL:0000473;4.19e-09;39!CL:0000234;4.19e-09;39 | |ontology_enrichment_celltype_v019=CL:0000860;1.70e-13;33!CL:0002057;1.70e-13;33!CL:0000473;4.19e-09;39!CL:0000234;4.19e-09;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.89e-14,136;CL:0000860,3.02e-11,42;CL:0002057,3.02e-11,42;CL:0000037,7.24e-11,168;CL:0000988,2.30e-10,177;CL:0002031,5.47e-10,120;CL:0002087,6.63e-10,115;CL:0000473,1.99e-09,48;CL:0000234,1.99e-09,48;CL:0002032,3.05e-09,161;CL:0000837,3.05e-09,161;CL:0000766,5.98e-09,72;CL:0000557,2.04e-07,67;CL:0002009,8.15e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;9.11e-09;42 | |ontology_enrichment_development_v019=CL:0002057;9.11e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.56e-13!41;UBERON:0001890!3.56e-13!41;UBERON:0006240!3.56e-13!41;UBERON:0001017!7.59e-13!82;UBERON:0003080!9.04e-13!42;UBERON:0001049!6.93e-12!57;UBERON:0005068!6.93e-12!57;UBERON:0006241!6.93e-12!57;UBERON:0007135!6.93e-12!57;UBERON:0005743!1.55e-11!86;UBERON:0001869!1.75e-11!32;UBERON:0000073!2.13e-11!94;UBERON:0001016!2.13e-11!94;UBERON:0002020!3.26e-11!34;UBERON:0003528!3.26e-11!34;UBERON:0001893!3.96e-11!34;UBERON:0002791!1.35e-10!33;UBERON:0002619!1.41e-10!22;UBERON:0002616!1.85e-10!59;UBERON:0000955!3.22e-10!69;UBERON:0006238!3.22e-10!69;UBERON:0001950!1.19e-09!20;UBERON:0000956!3.53e-08!25;UBERON:0000203!3.53e-08!25;UBERON:0007023!3.68e-07!115;UBERON:0002346!3.76e-07!90 | |ontology_enrichment_uberon=UBERON:0002780!3.56e-13!41;UBERON:0001890!3.56e-13!41;UBERON:0006240!3.56e-13!41;UBERON:0001017!7.59e-13!82;UBERON:0003080!9.04e-13!42;UBERON:0001049!6.93e-12!57;UBERON:0005068!6.93e-12!57;UBERON:0006241!6.93e-12!57;UBERON:0007135!6.93e-12!57;UBERON:0005743!1.55e-11!86;UBERON:0001869!1.75e-11!32;UBERON:0000073!2.13e-11!94;UBERON:0001016!2.13e-11!94;UBERON:0002020!3.26e-11!34;UBERON:0003528!3.26e-11!34;UBERON:0001893!3.96e-11!34;UBERON:0002791!1.35e-10!33;UBERON:0002619!1.41e-10!22;UBERON:0002616!1.85e-10!59;UBERON:0000955!3.22e-10!69;UBERON:0006238!3.22e-10!69;UBERON:0001950!1.19e-09!20;UBERON:0000956!3.53e-08!25;UBERON:0000203!3.53e-08!25;UBERON:0007023!3.68e-07!115;UBERON:0002346!3.76e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.88e-12;22!UBERON:0001869;1.16e-11;32!UBERON:0002780;4.02e-11;41!UBERON:0001890;4.02e-11;41!UBERON:0002791;4.51e-11;32!UBERON:0001893;5.16e-11;34!UBERON:0003528;6.13e-11;34!UBERON:0002020;6.13e-11;34!UBERON:0001950;7.66e-11;20!UBERON:0000956;3.14e-09;25!UBERON:0000203;3.14e-09;25!UBERON:0000073;2.17e-08;53!UBERON:0002616;2.17e-08;53 | |ontology_enrichment_uberon_v019=UBERON:0002619;6.88e-12;22!UBERON:0001869;1.16e-11;32!UBERON:0002780;4.02e-11;41!UBERON:0001890;4.02e-11;41!UBERON:0002791;4.51e-11;32!UBERON:0001893;5.16e-11;34!UBERON:0003528;6.13e-11;34!UBERON:0002020;6.13e-11;34!UBERON:0001950;7.66e-11;20!UBERON:0000956;3.14e-09;25!UBERON:0000203;3.14e-09;25!UBERON:0000073;2.17e-08;53!UBERON:0002616;2.17e-08;53 | ||
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| ||
|short_description=p1@HOMER1 | |short_description=p1@HOMER1 | ||
}} | }} |
Revision as of 15:27, 19 November 2012
Short description: | p1@HOMER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HOMER1_5end |
Coexpression cluster: | NA |
Association with transcript: | -306bp_to_ENST00000334082_5end |
EntrezGene: | HOMER1 |
HGNC: | 17512 |
UniProt: | Q86YM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.89e-14 | 136 |
classical monocyte | 3.02e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.02e-11 | 42 |
hematopoietic stem cell | 7.24e-11 | 168 |
hematopoietic cell | 2.30e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 5.47e-10 | 120 |
nongranular leukocyte | 6.63e-10 | 115 |
defensive cell | 1.99e-09 | 48 |
phagocyte | 1.99e-09 | 48 |
hematopoietic oligopotent progenitor cell | 3.05e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.05e-09 | 161 |
myeloid leukocyte | 5.98e-09 | 72 |
granulocyte monocyte progenitor cell | 2.04e-07 | 67 |
macrophage dendritic cell progenitor | 8.15e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 9.66e-15 | 41 |
forebrain | 9.66e-15 | 41 |
anterior neural tube | 9.66e-15 | 41 |
future forebrain | 9.66e-15 | 41 |
regional part of nervous system | 7.92e-14 | 53 |
regional part of brain | 7.92e-14 | 53 |
neural tube | 1.02e-13 | 56 |
neural rod | 1.02e-13 | 56 |
future spinal cord | 1.02e-13 | 56 |
neural keel | 1.02e-13 | 56 |
central nervous system | 1.84e-13 | 81 |
nervous system | 5.80e-13 | 89 |
cerebral hemisphere | 7.74e-13 | 32 |
brain grey matter | 1.58e-12 | 34 |
gray matter | 1.58e-12 | 34 |
telencephalon | 1.96e-12 | 34 |
regional part of telencephalon | 4.45e-12 | 32 |
regional part of cerebral cortex | 9.90e-12 | 22 |
neocortex | 1.10e-10 | 20 |
brain | 1.21e-10 | 68 |
future brain | 1.21e-10 | 68 |
neurectoderm | 3.01e-09 | 86 |
cerebral cortex | 4.19e-09 | 25 |
pallium | 4.19e-09 | 25 |
neural plate | 1.01e-08 | 82 |
presumptive neural plate | 1.01e-08 | 82 |
adult organism | 7.01e-08 | 114 |
pre-chordal neural plate | 7.49e-08 | 61 |
bone marrow | 4.68e-07 | 76 |
hematopoietic system | 7.91e-07 | 98 |
blood island | 7.91e-07 | 98 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.