FFCP PHASE1:Hg19::chr19:2819943..2819977,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3095!3.54e-07!22;DOID:2994!3.54e-07!22 | |ontology_enrichment_disease=DOID:3095!3.54e-07!22;DOID:2994!3.54e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;8.73e-07;22!DOID:2994;8.73e-07;22 | |ontology_enrichment_disease_v019=DOID:3095;8.73e-07;22!DOID:2994;8.73e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,3.33e-07,22;DOID:2994,3.33e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.13e-18!94;UBERON:0001016!1.13e-18!94;UBERON:0005743!1.39e-16!86;UBERON:0001017!3.96e-16!82;UBERON:0000955!5.77e-13!69;UBERON:0006238!5.77e-13!69;UBERON:0001049!2.24e-11!57;UBERON:0005068!2.24e-11!57;UBERON:0006241!2.24e-11!57;UBERON:0007135!2.24e-11!57;UBERON:0002616!8.06e-11!59;UBERON:0002346!1.34e-10!90;UBERON:0000924!3.01e-10!173;UBERON:0006601!3.01e-10!173;UBERON:0001893!7.54e-10!34;UBERON:0002619!1.19e-09!22;UBERON:0001869!1.35e-09!32;UBERON:0003075!1.98e-09!86;UBERON:0007284!1.98e-09!86;UBERON:0002791!2.80e-09!33;UBERON:0004121!2.87e-09!169;UBERON:0000956!3.00e-09!25;UBERON:0000203!3.00e-09!25;UBERON:0002780!5.19e-09!41;UBERON:0001890!5.19e-09!41;UBERON:0006240!5.19e-09!41;UBERON:0001950!5.97e-09!20;UBERON:0002020!6.21e-09!34;UBERON:0003528!6.21e-09!34;UBERON:0003080!2.03e-08!42;UBERON:0007023!7.89e-08!115;UBERON:0000153!3.60e-07!129;UBERON:0007811!3.60e-07!129;UBERON:0000033!9.36e-07!123 | |ontology_enrichment_uberon=UBERON:0000073!1.13e-18!94;UBERON:0001016!1.13e-18!94;UBERON:0005743!1.39e-16!86;UBERON:0001017!3.96e-16!82;UBERON:0000955!5.77e-13!69;UBERON:0006238!5.77e-13!69;UBERON:0001049!2.24e-11!57;UBERON:0005068!2.24e-11!57;UBERON:0006241!2.24e-11!57;UBERON:0007135!2.24e-11!57;UBERON:0002616!8.06e-11!59;UBERON:0002346!1.34e-10!90;UBERON:0000924!3.01e-10!173;UBERON:0006601!3.01e-10!173;UBERON:0001893!7.54e-10!34;UBERON:0002619!1.19e-09!22;UBERON:0001869!1.35e-09!32;UBERON:0003075!1.98e-09!86;UBERON:0007284!1.98e-09!86;UBERON:0002791!2.80e-09!33;UBERON:0004121!2.87e-09!169;UBERON:0000956!3.00e-09!25;UBERON:0000203!3.00e-09!25;UBERON:0002780!5.19e-09!41;UBERON:0001890!5.19e-09!41;UBERON:0006240!5.19e-09!41;UBERON:0001950!5.97e-09!20;UBERON:0002020!6.21e-09!34;UBERON:0003528!6.21e-09!34;UBERON:0003080!2.03e-08!42;UBERON:0007023!7.89e-08!115;UBERON:0000153!3.60e-07!129;UBERON:0007811!3.60e-07!129;UBERON:0000033!9.36e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.16e-13;22!UBERON:0001950;2.54e-13;20!UBERON:0000922;1.32e-11;49!UBERON:0000956;2.74e-11;25!UBERON:0000203;2.74e-11;25!UBERON:0001869;1.29e-10;32!UBERON:0001893;1.49e-10;34!UBERON:0002791;1.11e-09;32!UBERON:0002780;3.74e-09;41!UBERON:0001890;3.74e-09;41!UBERON:0000073;1.04e-08;53!UBERON:0002616;1.04e-08;53!UBERON:0003528;2.95e-08;34!UBERON:0002020;2.95e-08;34 | |ontology_enrichment_uberon_v019=UBERON:0002619;2.16e-13;22!UBERON:0001950;2.54e-13;20!UBERON:0000922;1.32e-11;49!UBERON:0000956;2.74e-11;25!UBERON:0000203;2.74e-11;25!UBERON:0001869;1.29e-10;32!UBERON:0001893;1.49e-10;34!UBERON:0002791;1.11e-09;32!UBERON:0002780;3.74e-09;41!UBERON:0001890;3.74e-09;41!UBERON:0000073;1.04e-08;53!UBERON:0002616;1.04e-08;53!UBERON:0003528;2.95e-08;34!UBERON:0002020;2.95e-08;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.71e-17,89;UBERON:0001017,2.19e-16,81;UBERON:0000073,5.78e-15,53;UBERON:0002616,5.78e-15,53;UBERON:0000955,4.67e-14,68;UBERON:0006238,4.67e-14,68;UBERON:0001049,1.04e-13,56;UBERON:0005068,1.04e-13,56;UBERON:0006241,1.04e-13,56;UBERON:0007135,1.04e-13,56;UBERON:0002619,1.26e-13,22;UBERON:0002346,1.65e-13,86;UBERON:0001950,1.76e-13,20;UBERON:0002780,1.58e-12,41;UBERON:0001890,1.58e-12,41;UBERON:0003080,1.58e-12,41;UBERON:0006240,1.58e-12,41;UBERON:0001893,2.88e-12,34;UBERON:0001869,5.15e-12,32;UBERON:0003075,1.07e-11,82;UBERON:0007284,1.07e-11,82;UBERON:0000956,1.72e-11,25;UBERON:0000203,1.72e-11,25;UBERON:0003056,7.00e-11,61;UBERON:0002791,1.80e-10,32;UBERON:0003528,1.42e-09,34;UBERON:0002020,1.42e-09,34;UBERON:0010371,3.33e-09,104;UBERON:0004121,7.86e-09,171;UBERON:0000924,7.86e-09,171;UBERON:0006601,7.86e-09,171;UBERON:0007023,2.91e-07,114;UBERON:0010314,8.46e-07,132 | |||
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| ||
|short_description=p2@ZNF554 | |short_description=p2@ZNF554 | ||
}} | }} |
Revision as of 10:38, 21 November 2012
Short description: | p2@ZNF554 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ZNF554_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_ENST00000317243, NM_001102651, uc002lwl.2, uc002lwm.2_5end |
EntrezGene: | ZNF554 |
HGNC: | 26629 |
UniProt: | Q86TJ5B3KNM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 5.71e-17 | 89 |
central nervous system | 2.19e-16 | 81 |
regional part of nervous system | 5.78e-15 | 53 |
regional part of brain | 5.78e-15 | 53 |
brain | 4.67e-14 | 68 |
future brain | 4.67e-14 | 68 |
neural tube | 1.04e-13 | 56 |
neural rod | 1.04e-13 | 56 |
future spinal cord | 1.04e-13 | 56 |
neural keel | 1.04e-13 | 56 |
regional part of cerebral cortex | 1.26e-13 | 22 |
neurectoderm | 1.65e-13 | 86 |
neocortex | 1.76e-13 | 20 |
regional part of forebrain | 1.58e-12 | 41 |
forebrain | 1.58e-12 | 41 |
anterior neural tube | 1.58e-12 | 41 |
future forebrain | 1.58e-12 | 41 |
telencephalon | 2.88e-12 | 34 |
cerebral hemisphere | 5.15e-12 | 32 |
neural plate | 1.07e-11 | 82 |
presumptive neural plate | 1.07e-11 | 82 |
cerebral cortex | 1.72e-11 | 25 |
pallium | 1.72e-11 | 25 |
pre-chordal neural plate | 7.00e-11 | 61 |
regional part of telencephalon | 1.80e-10 | 32 |
brain grey matter | 1.42e-09 | 34 |
gray matter | 1.42e-09 | 34 |
ecto-epithelium | 3.33e-09 | 104 |
ectoderm-derived structure | 7.86e-09 | 171 |
ectoderm | 7.86e-09 | 171 |
presumptive ectoderm | 7.86e-09 | 171 |
adult organism | 2.91e-07 | 114 |
structure with developmental contribution from neural crest | 8.46e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.33e-07 | 22 |
germ cell cancer | 3.33e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.