FFCP PHASE1:Hg19::chr14:22362563..22362575,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000791!1.18e-33!18;CL:0000789!1.18e-33!18;CL:0002420!1.18e-33!18;CL:0002419!1.18e-33!18;CL:0000790!1.18e-33!18;CL:0000084!3.11e-26!25;CL:0000827!3.11e-26!25;CL:0000625!7.35e-22!11;CL:0000624!9.04e-16!6;CL:0000838!4.55e-13!52;CL:0000542!9.99e-13!53;CL:0000051!9.99e-13!53;CL:0000898!6.98e-09!3;CL:0000738!8.83e-09!140;CL:0000842!3.83e-08!3;CL:0002087!2.03e-07!119 | |ontology_enrichment_celltype=CL:0000791!1.18e-33!18;CL:0000789!1.18e-33!18;CL:0002420!1.18e-33!18;CL:0002419!1.18e-33!18;CL:0000790!1.18e-33!18;CL:0000084!3.11e-26!25;CL:0000827!3.11e-26!25;CL:0000625!7.35e-22!11;CL:0000624!9.04e-16!6;CL:0000838!4.55e-13!52;CL:0000542!9.99e-13!53;CL:0000051!9.99e-13!53;CL:0000898!6.98e-09!3;CL:0000738!8.83e-09!140;CL:0000842!3.83e-08!3;CL:0002087!2.03e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.17e-37;18!CL:0000789;5.17e-37;18!CL:0002419;5.17e-37;18!CL:0000084;3.40e-30;25!CL:0000624;7.59e-25;6!CL:0000625;3.28e-18;11!CL:0000898;1.56e-13;3!CL:0000226;1.94e-12;3!CL:0000842;1.94e-12;3!CL:0000815;2.12e-09;2!CL:0000792;2.12e-09;2!CL:0002677;2.12e-09;2!CL:0000542;3.28e-07;53 | |ontology_enrichment_celltype_v019=CL:0000791;5.17e-37;18!CL:0000789;5.17e-37;18!CL:0002419;5.17e-37;18!CL:0000084;3.40e-30;25!CL:0000624;7.59e-25;6!CL:0000625;3.28e-18;11!CL:0000898;1.56e-13;3!CL:0000226;1.94e-12;3!CL:0000842;1.94e-12;3!CL:0000815;2.12e-09;2!CL:0000792;2.12e-09;2!CL:0002677;2.12e-09;2!CL:0000542;3.28e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.52e-37,18;CL:0000789,4.52e-37,18;CL:0002420,4.52e-37,18;CL:0002419,4.52e-37,18;CL:0000790,4.52e-37,18;CL:0000084,3.22e-30,25;CL:0000827,3.22e-30,25;CL:0000624,5.90e-25,6;CL:0000625,3.42e-18,11;CL:0000898,1.32e-13,3;CL:0000838,7.02e-13,52;CL:0000542,1.41e-12,53;CL:0000051,1.41e-12,53;CL:0000226,2.15e-12,3;CL:0000842,2.15e-12,3;CL:0000815,1.87e-09,2;CL:0000792,1.87e-09,2;CL:0002677,1.87e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;5.17e-37;18!CL:0000051;3.28e-07;53 | |ontology_enrichment_development_v019=CL:0000790;5.17e-37;18!CL:0000051;3.28e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.11e-09!15;UBERON:0000179!1.11e-09!15;UBERON:0000463!1.11e-09!15;UBERON:0004177!1.87e-09!7;UBERON:0007023!9.26e-09!115;UBERON:0002370!5.01e-07!4;UBERON:0005058!5.01e-07!4;UBERON:0009113!5.01e-07!4;UBERON:0003295!5.01e-07!4;UBERON:0005562!5.01e-07!4 | |ontology_enrichment_uberon=UBERON:0000178!1.11e-09!15;UBERON:0000179!1.11e-09!15;UBERON:0000463!1.11e-09!15;UBERON:0004177!1.87e-09!7;UBERON:0007023!9.26e-09!115;UBERON:0002370!5.01e-07!4;UBERON:0005058!5.01e-07!4;UBERON:0009113!5.01e-07!4;UBERON:0003295!5.01e-07!4;UBERON:0005562!5.01e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.94e-16;15!UBERON:0000179;4.94e-16;15!UBERON:0000463;4.94e-16;15!UBERON:0002390;1.26e-11;32!UBERON:0002370;3.91e-10;2!UBERON:0005058;3.91e-10;2!UBERON:0009113;3.91e-10;2!UBERON:0004177;2.17e-08;5!UBERON:0005057;2.17e-08;5!UBERON:0002193;3.52e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.94e-16;15!UBERON:0000179;4.94e-16;15!UBERON:0000463;4.94e-16;15!UBERON:0002390;1.26e-11;32!UBERON:0002370;3.91e-10;2!UBERON:0005058;3.91e-10;2!UBERON:0009113;3.91e-10;2!UBERON:0004177;2.17e-08;5!UBERON:0005057;2.17e-08;5!UBERON:0002193;3.52e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.05e-16,15;UBERON:0000179,5.05e-16,15;UBERON:0000463,5.05e-16,15;UBERON:0002370,8.25e-11,4;UBERON:0005058,8.25e-11,4;UBERON:0009113,8.25e-11,4;UBERON:0003295,8.25e-11,4;UBERON:0005562,8.25e-11,4;UBERON:0004177,3.73e-10,7;UBERON:0005057,3.73e-10,7;UBERON:0003351,2.47e-07,6;UBERON:0001042,3.14e-07,10;UBERON:0009145,3.14e-07,10;UBERON:0003408,3.70e-07,10 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53531759238885,0.464448369948228,0,0,0,0,0,0,0,0,0.868043482863407,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52432471261816,1.96505381374582,3.08402248499264,6.35308682484577,3.91106719960308,1.89379122293893,3.89653456815823,9.91553066278045,3.53527088969805,3.32300841875432,6.22848886659536,12.2967666936648,10.9249851950298,19.4036727432338,16.3046510493651,8.69409257205158,8.89719378972362,4.0131124213457,7.31748666634838,6.45863253376127,7.66440987203842,5.15441168223945,8.34964983664359,10.1940932583711,3.25541726928209,6.65316431113862,0.301150238155546,0.383959833463255,4.99722906209383,5.44587679701239,3.28451198768419,1.20964045934839,0,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0,0.77005821767849,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27858874869665,2.1440859791201,2.05681136543097,0,0,3.96562588147135,0,0,0,0,0,0,6.05819836369525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,1.03382309777839,0.773494655682926,0,0,0,0,0,1.37618785021362,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,11.8197704999891,7.13859214402366,0,0,0,0,0,2.55937801455433,0.143444410785353,0,0,0,0,0,0,0,0,0,1.40891655513718,0 | ||
|short_description=p2@uc010tmi.1,p2@uc010tmj.1 | |short_description=p2@uc010tmi.1,p2@uc010tmj.1 | ||
}} | }} |
Revision as of 10:40, 21 November 2012
Short description: | p2@uc010tmi.1, p2@uc010tmj.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_uc010tmi.1_5end, CAGE_peak_2_at_uc010tmj.1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_uc010tmi.1, uc010tmj.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.52e-37 | 18 |
alpha-beta T cell | 4.52e-37 | 18 |
immature T cell | 4.52e-37 | 18 |
mature T cell | 4.52e-37 | 18 |
immature alpha-beta T cell | 4.52e-37 | 18 |
T cell | 3.22e-30 | 25 |
pro-T cell | 3.22e-30 | 25 |
CD4-positive, alpha-beta T cell | 5.90e-25 | 6 |
CD8-positive, alpha-beta T cell | 3.42e-18 | 11 |
naive T cell | 1.32e-13 | 3 |
lymphoid lineage restricted progenitor cell | 7.02e-13 | 52 |
lymphocyte | 1.41e-12 | 53 |
common lymphoid progenitor | 1.41e-12 | 53 |
single nucleate cell | 2.15e-12 | 3 |
mononuclear cell | 2.15e-12 | 3 |
regulatory T cell | 1.87e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.87e-09 | 2 |
naive regulatory T cell | 1.87e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.05e-16 | 15 |
haemolymphatic fluid | 5.05e-16 | 15 |
organism substance | 5.05e-16 | 15 |
thymus | 8.25e-11 | 4 |
hemolymphoid system gland | 8.25e-11 | 4 |
thymic region | 8.25e-11 | 4 |
pharyngeal gland | 8.25e-11 | 4 |
thymus primordium | 8.25e-11 | 4 |
hemopoietic organ | 3.73e-10 | 7 |
immune organ | 3.73e-10 | 7 |
pharyngeal epithelium | 2.47e-07 | 6 |
chordate pharynx | 3.14e-07 | 10 |
pharyngeal region of foregut | 3.14e-07 | 10 |
gland of gut | 3.70e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.