FFCP PHASE1:Mm9::chr13:100203487..100203494,-: Difference between revisions
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|id=chr13:100203487..100203494,- | |id=chr13:100203487..100203494,- | ||
|ontology_enrichment_celltype=CL:0000117!2.83e-23!23;CL:0000337!2.83e-23!23;CL:0000540!1.98e-18!33;CL:0000047!1.98e-18!33;CL:0000031!1.98e-18!33;CL:0000404!1.98e-18!33;CL:0000393!3.28e-14!39;CL:0000211!3.28e-14!39;CL:0002319!5.45e-14!43;CL:0000221!1.83e-13!44;CL:0000133!1.83e-13!44;CL:0000055!8.96e-11!50;CL:0002609!1.00e-07!6 | |ontology_enrichment_celltype=CL:0000117!2.83e-23!23;CL:0000337!2.83e-23!23;CL:0000540!1.98e-18!33;CL:0000047!1.98e-18!33;CL:0000031!1.98e-18!33;CL:0000404!1.98e-18!33;CL:0000393!3.28e-14!39;CL:0000211!3.28e-14!39;CL:0002319!5.45e-14!43;CL:0000221!1.83e-13!44;CL:0000133!1.83e-13!44;CL:0000055!8.96e-11!50;CL:0002609!1.00e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.06e-38,23;CL:0000337,2.06e-38,23;CL:0000540,1.96e-26,33;CL:0000047,1.96e-26,33;CL:0000031,1.96e-26,33;CL:0000404,1.96e-26,33;CL:0000393,3.46e-22,39;CL:0000211,3.46e-22,39;CL:0002319,5.20e-20,43;CL:0002612,5.37e-20,3;CL:0002610,8.33e-20,3;CL:0000221,1.58e-19,44;CL:0000133,1.58e-19,44;CL:0002321,8.61e-12,70;CL:0000120,4.24e-09,3;CL:0000723,9.55e-09,91;CL:0000048,9.55e-09,91;CL:0000034,4.09e-08,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.17e-21!73;UBERON:0005743!6.17e-21!73;UBERON:0000073!6.58e-21!75;UBERON:0001016!6.58e-21!75;UBERON:0001049!3.65e-18!52;UBERON:0005068!3.65e-18!52;UBERON:0006241!3.65e-18!52;UBERON:0007135!3.65e-18!52;UBERON:0002346!5.95e-18!71;UBERON:0003075!5.95e-18!71;UBERON:0007284!5.95e-18!71;UBERON:0004121!2.13e-17!102;UBERON:0000924!2.13e-17!102;UBERON:0006601!2.13e-17!102;UBERON:0000033!3.58e-17!63;UBERON:0000955!6.30e-17!50;UBERON:0006238!6.30e-17!50;UBERON:0002616!3.37e-16!49;UBERON:0002020!9.45e-16!34;UBERON:0003056!4.51e-15!49;UBERON:0002780!1.74e-13!39;UBERON:0001890!1.74e-13!39;UBERON:0006240!1.74e-13!39;UBERON:0003080!6.16e-13!40;UBERON:0002791!2.27e-11!29;UBERON:0003528!2.27e-11!29;UBERON:0001893!2.27e-11!29;UBERON:0007811!5.72e-10!86;UBERON:0000153!3.70e-08!94;UBERON:0002420!2.09e-07!8;UBERON:0007245!2.09e-07!8;UBERON:0010009!2.09e-07!8;UBERON:0010011!2.09e-07!8;UBERON:0000454!2.09e-07!8;UBERON:0000025!2.40e-07!114;UBERON:0002240!7.50e-07!6;UBERON:0005174!7.50e-07!6;UBERON:0001137!7.50e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!6.17e-21!73;UBERON:0005743!6.17e-21!73;UBERON:0000073!6.58e-21!75;UBERON:0001016!6.58e-21!75;UBERON:0001049!3.65e-18!52;UBERON:0005068!3.65e-18!52;UBERON:0006241!3.65e-18!52;UBERON:0007135!3.65e-18!52;UBERON:0002346!5.95e-18!71;UBERON:0003075!5.95e-18!71;UBERON:0007284!5.95e-18!71;UBERON:0004121!2.13e-17!102;UBERON:0000924!2.13e-17!102;UBERON:0006601!2.13e-17!102;UBERON:0000033!3.58e-17!63;UBERON:0000955!6.30e-17!50;UBERON:0006238!6.30e-17!50;UBERON:0002616!3.37e-16!49;UBERON:0002020!9.45e-16!34;UBERON:0003056!4.51e-15!49;UBERON:0002780!1.74e-13!39;UBERON:0001890!1.74e-13!39;UBERON:0006240!1.74e-13!39;UBERON:0003080!6.16e-13!40;UBERON:0002791!2.27e-11!29;UBERON:0003528!2.27e-11!29;UBERON:0001893!2.27e-11!29;UBERON:0007811!5.72e-10!86;UBERON:0000153!3.70e-08!94;UBERON:0002420!2.09e-07!8;UBERON:0007245!2.09e-07!8;UBERON:0010009!2.09e-07!8;UBERON:0010011!2.09e-07!8;UBERON:0000454!2.09e-07!8;UBERON:0000025!2.40e-07!114;UBERON:0002240!7.50e-07!6;UBERON:0005174!7.50e-07!6;UBERON:0001137!7.50e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,5.37e-20,3;UBERON:0004684,8.33e-20,3;UBERON:0002275,8.33e-20,3;UBERON:0001017,2.39e-13,73;UBERON:0000073,4.04e-13,54;UBERON:0001016,5.91e-13,75;UBERON:0001948,3.02e-12,5;UBERON:0002315,3.02e-12,5;UBERON:0002020,2.81e-11,34;UBERON:0002240,2.68e-10,6;UBERON:0005174,2.68e-10,6;UBERON:0001137,2.68e-10,6;UBERON:0004121,6.35e-10,95;UBERON:0000924,6.35e-10,95;UBERON:0006601,6.35e-10,95;UBERON:0002420,7.90e-08,8;UBERON:0007245,7.90e-08,8;UBERON:0010009,7.90e-08,8;UBERON:0010011,7.90e-08,8;UBERON:0000454,7.90e-08,8;UBERON:0001049,4.30e-07,52;UBERON:0005068,4.30e-07,52;UBERON:0006241,4.30e-07,52;UBERON:0007135,4.30e-07,52 | |||
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|short_description=p@chr13:100203487..100203494,- | |short_description=p@chr13:100203487..100203494,- | ||
}} | }} |
Revision as of 03:47, 14 November 2012
Short description: | p@chr13:100203487..100203494, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100203487..100203494, - |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.06e-38 | 23 |
neuroblast (sensu Vertebrata) | 2.06e-38 | 23 |
neuron | 1.96e-26 | 33 |
neuronal stem cell | 1.96e-26 | 33 |
neuroblast | 1.96e-26 | 33 |
electrically signaling cell | 1.96e-26 | 33 |
electrically responsive cell | 3.46e-22 | 39 |
electrically active cell | 3.46e-22 | 39 |
neural cell | 5.20e-20 | 43 |
neuron of the ventral spinal cord | 5.37e-20 | 3 |
raphe nuclei neuron | 8.33e-20 | 3 |
ectodermal cell | 1.58e-19 | 44 |
neurectodermal cell | 1.58e-19 | 44 |
embryonic cell | 8.61e-12 | 70 |
granule cell | 4.24e-09 | 3 |
somatic stem cell | 9.55e-09 | 91 |
multi fate stem cell | 9.55e-09 | 91 |
stem cell | 4.09e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 5.37e-20 | 3 |
raphe nuclei | 8.33e-20 | 3 |
reticular formation | 8.33e-20 | 3 |
central nervous system | 2.39e-13 | 73 |
regional part of nervous system | 4.04e-13 | 54 |
nervous system | 5.91e-13 | 75 |
regional part of spinal cord | 3.02e-12 | 5 |
gray matter of spinal cord | 3.02e-12 | 5 |
gray matter | 2.81e-11 | 34 |
spinal cord | 2.68e-10 | 6 |
dorsal region element | 2.68e-10 | 6 |
dorsum | 2.68e-10 | 6 |
ectoderm-derived structure | 6.35e-10 | 95 |
ectoderm | 6.35e-10 | 95 |
presumptive ectoderm | 6.35e-10 | 95 |
basal ganglion | 7.90e-08 | 8 |
nuclear complex of neuraxis | 7.90e-08 | 8 |
aggregate regional part of brain | 7.90e-08 | 8 |
collection of basal ganglia | 7.90e-08 | 8 |
cerebral subcortex | 7.90e-08 | 8 |
neural tube | 4.30e-07 | 52 |
neural rod | 4.30e-07 | 52 |
future spinal cord | 4.30e-07 | 52 |
neural keel | 4.30e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.