FFCP PHASE1:Mm9::chr1:195027791..195027802,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=215243|HGNC=|MCL_coexpression_id=33|UniProt=G3X949,B2RPU5,Q8C0G2|association_with_transcript=-51bp_to_ENSMUST00000043550,NM_153137,uc007eec.2_5end|description=CAGE_peak_5_at_Traf3ip3_5end|id=chr1:195027791..195027802,-|ontology_enrichment_celltype=CL:0000838!2.59e-17!12;CL:0002031!2.40e-16!25;CL:0000084!4.18e-16!11;CL:0000827!4.18e-16!11;CL:0000542!1.02e-15!13;CL:0000051!1.02e-15!13;CL:0000791!8.54e-14!9;CL:0000789!8.54e-14!9;CL:0002420!8.54e-14!9;CL:0002419!8.54e-14!9;CL:0000790!8.54e-14!9;CL:0000988!6.84e-13!32;CL:0002032!6.84e-13!32;CL:0000037!6.84e-13!32;CL:0000566!6.84e-13!32;CL:0000837!6.84e-13!32;CL:0000624!2.31e-12!8;CL:0000738!3.11e-11!17;CL:0002087!3.11e-11!17;CL:0000893!1.13e-09!6;CL:0002489!1.13e-09!6;CL:0000898!1.13e-09!6;CL:0000809!1.13e-09!6;CL:0000810!1.13e-09!6;CL:0000895!1.13e-09!6;CL:0000808!1.13e-09!6;CL:0000894!1.13e-09!6;CL:0000806!1.13e-09!6;CL:0000807!1.13e-09!6;CL:0000805!1.13e-09!6;CL:0002425!1.13e-09!6;CL:0002436!1.13e-09!6;CL:0002427!1.13e-09!6;CL:0002428!1.13e-09!6;CL:0002429!1.13e-09!6;CL:0002433!1.13e-09!6;CL:0002431!1.13e-09!6;CL:0002432!1.13e-09!6;CL:0000553!7.22e-09!6;CL:0000556!7.22e-09!6;CL:0002320!2.18e-07!46;CL:0000134!2.18e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,9.51e-11,9;CL:0000789,9.51e-11,9;CL:0002420,9.51e-11,9;CL:0002419,9.51e-11,9;CL:0000790,9.51e-11,9;CL:0000084,9.56e-09,11;CL:0000827,9.56e-09,11;CL:0002031,1.33e-08,25;CL:0000624,4.16e-08,8;CL:0000838,5.41e-08,12;CL:0000542,2.34e-07,13;CL:0000051,2.34e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.34e-24!48;UBERON:0002370!1.74e-24!23;UBERON:0000974!1.74e-24!23;UBERON:0004807!1.74e-24!23;UBERON:0005058!1.74e-24!23;UBERON:0003351!1.74e-24!23;UBERON:0009113!1.74e-24!23;UBERON:0003295!1.74e-24!23;UBERON:0009722!1.74e-24!23;UBERON:0005562!1.74e-24!23;UBERON:0007690!1.74e-24!23;UBERON:0004177!2.12e-24!29;UBERON:0006562!3.37e-23!24;UBERON:0003408!3.37e-23!24;UBERON:0001557!3.37e-23!24;UBERON:0001042!3.37e-23!24;UBERON:0008814!3.37e-23!24;UBERON:0009145!3.37e-23!24;UBERON:0002390!5.88e-23!45;UBERON:0003061!5.88e-23!45;UBERON:0000072!6.50e-20!27;UBERON:0002405!3.36e-16!70;UBERON:0000063!6.01e-14!35;UBERON:0000065!1.85e-13!41;UBERON:0005057!4.02e-13!51;UBERON:0001004!5.52e-13!42;UBERON:0003081!2.88e-09!88;UBERON:0002368!7.17e-09!60;UBERON:0000490!8.91e-09!66;UBERON:0003929!1.66e-08!55;UBERON:0002530!1.07e-07!65;UBERON:0002384!2.18e-07!46;UBERON:0005911!6.15e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.41e-30,23;UBERON:0000974,5.41e-30,23;UBERON:0004807,5.41e-30,23;UBERON:0005058,5.41e-30,23;UBERON:0003351,5.41e-30,23;UBERON:0009113,5.41e-30,23;UBERON:0003295,5.41e-30,23;UBERON:0009722,5.41e-30,23;UBERON:0005562,5.41e-30,23;UBERON:0007690,5.41e-30,23;UBERON:0006562,1.23e-28,24;UBERON:0003408,1.23e-28,24;UBERON:0001557,1.23e-28,24;UBERON:0001042,1.23e-28,24;UBERON:0008814,1.23e-28,24;UBERON:0009145,1.23e-28,24;UBERON:0000072,3.58e-25,27;UBERON:0004177,2.93e-23,29;UBERON:0005057,2.93e-23,29;UBERON:0002193,2.43e-22,48;UBERON:0002405,2.43e-22,48;UBERON:0002390,3.52e-21,45;UBERON:0003061,3.52e-21,45;UBERON:0000077,7.88e-19,35;UBERON:0007811,3.10e-18,36;UBERON:0000065,1.08e-15,41;UBERON:0001004,2.94e-15,42;UBERON:0000153,7.65e-15,43;UBERON:0000490,7.18e-12,66;UBERON:0003929,4.93e-11,55;UBERON:0002368,6.76e-10,60;UBERON:0003081,1.97e-09,87;UBERON:0002530,6.20e-09,65;UBERON:0005911,2.90e-08,69;UBERON:0000926,5.74e-08,120;UBERON:0004120,5.74e-08,120;UBERON:0006603,5.74e-08,120;UBERON:0000949,8.22e-08,72;UBERON:0001041,9.02e-07,80|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,0.985521055061667,0.936258105287974,0.68487187290202,1.43589886191606,6.50562773738582,5.50748535239684,0.333109761815663,0.607425802169478,0.699561878128147,1.41957974411207,1.64537320326887,1.69755860719212,0.0850432901510698,0.893618560807968,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,2.09409497589519,1.17646297606203,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,2.84831672011889,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0.410082683163076,0.915112692826091,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74016680942267,0.405450430580328,0.308132871494482,0.77952493786677,1.25318686967237,1.78813219303138,1.68273629327956,1.47689527174577,2.1202954489111,1.447929326445,3.42809029465258,2.53390489923356,5.29165129021812,3.50630706544707,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421|short_description=p5@Traf3ip3}} | ||
|EntrezGene=215243 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=G3X949,B2RPU5,Q8C0G2 | |||
|association_with_transcript=-51bp_to_ENSMUST00000043550,NM_153137,uc007eec.2_5end | |||
|description=CAGE_peak_5_at_Traf3ip3_5end | |||
|id=chr1:195027791..195027802,- | |||
|ontology_enrichment_celltype=CL:0000838!2.59e-17!12;CL:0002031!2.40e-16!25;CL:0000084!4.18e-16!11;CL:0000827!4.18e-16!11;CL:0000542!1.02e-15!13;CL:0000051!1.02e-15!13;CL:0000791!8.54e-14!9;CL:0000789!8.54e-14!9;CL:0002420!8.54e-14!9;CL:0002419!8.54e-14!9;CL:0000790!8.54e-14!9;CL:0000988!6.84e-13!32;CL:0002032!6.84e-13!32;CL:0000037!6.84e-13!32;CL:0000566!6.84e-13!32;CL:0000837!6.84e-13!32;CL:0000624!2.31e-12!8;CL:0000738!3.11e-11!17;CL:0002087!3.11e-11!17;CL:0000893!1.13e-09!6;CL:0002489!1.13e-09!6;CL:0000898!1.13e-09!6;CL:0000809!1.13e-09!6;CL:0000810!1.13e-09!6;CL:0000895!1.13e-09!6;CL:0000808!1.13e-09!6;CL:0000894!1.13e-09!6;CL:0000806!1.13e-09!6;CL:0000807!1.13e-09!6;CL:0000805!1.13e-09!6;CL:0002425!1.13e-09!6;CL:0002436!1.13e-09!6;CL:0002427!1.13e-09!6;CL:0002428!1.13e-09!6;CL:0002429!1.13e-09!6;CL:0002433!1.13e-09!6;CL:0002431!1.13e-09!6;CL:0002432!1.13e-09!6;CL:0000553!7.22e-09!6;CL:0000556!7.22e-09!6;CL:0002320!2.18e-07!46;CL:0000134!2.18e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.51e-11,9;CL:0000789,9.51e-11,9;CL:0002420,9.51e-11,9;CL:0002419,9.51e-11,9;CL:0000790,9.51e-11,9;CL:0000084,9.56e-09,11;CL:0000827,9.56e-09,11;CL:0002031,1.33e-08,25;CL:0000624,4.16e-08,8;CL:0000838,5.41e-08,12;CL:0000542,2.34e-07,13;CL:0000051,2.34e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.34e-24!48;UBERON:0002370!1.74e-24!23;UBERON:0000974!1.74e-24!23;UBERON:0004807!1.74e-24!23;UBERON:0005058!1.74e-24!23;UBERON:0003351!1.74e-24!23;UBERON:0009113!1.74e-24!23;UBERON:0003295!1.74e-24!23;UBERON:0009722!1.74e-24!23;UBERON:0005562!1.74e-24!23;UBERON:0007690!1.74e-24!23;UBERON:0004177!2.12e-24!29;UBERON:0006562!3.37e-23!24;UBERON:0003408!3.37e-23!24;UBERON:0001557!3.37e-23!24;UBERON:0001042!3.37e-23!24;UBERON:0008814!3.37e-23!24;UBERON:0009145!3.37e-23!24;UBERON:0002390!5.88e-23!45;UBERON:0003061!5.88e-23!45;UBERON:0000072!6.50e-20!27;UBERON:0002405!3.36e-16!70;UBERON:0000063!6.01e-14!35;UBERON:0000065!1.85e-13!41;UBERON:0005057!4.02e-13!51;UBERON:0001004!5.52e-13!42;UBERON:0003081!2.88e-09!88;UBERON:0002368!7.17e-09!60;UBERON:0000490!8.91e-09!66;UBERON:0003929!1.66e-08!55;UBERON:0002530!1.07e-07!65;UBERON:0002384!2.18e-07!46;UBERON:0005911!6.15e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.41e-30,23;UBERON:0000974,5.41e-30,23;UBERON:0004807,5.41e-30,23;UBERON:0005058,5.41e-30,23;UBERON:0003351,5.41e-30,23;UBERON:0009113,5.41e-30,23;UBERON:0003295,5.41e-30,23;UBERON:0009722,5.41e-30,23;UBERON:0005562,5.41e-30,23;UBERON:0007690,5.41e-30,23;UBERON:0006562,1.23e-28,24;UBERON:0003408,1.23e-28,24;UBERON:0001557,1.23e-28,24;UBERON:0001042,1.23e-28,24;UBERON:0008814,1.23e-28,24;UBERON:0009145,1.23e-28,24;UBERON:0000072,3.58e-25,27;UBERON:0004177,2.93e-23,29;UBERON:0005057,2.93e-23,29;UBERON:0002193,2.43e-22,48;UBERON:0002405,2.43e-22,48;UBERON:0002390,3.52e-21,45;UBERON:0003061,3.52e-21,45;UBERON:0000077,7.88e-19,35;UBERON:0007811,3.10e-18,36;UBERON:0000065,1.08e-15,41;UBERON:0001004,2.94e-15,42;UBERON:0000153,7.65e-15,43;UBERON:0000490,7.18e-12,66;UBERON:0003929,4.93e-11,55;UBERON:0002368,6.76e-10,60;UBERON:0003081,1.97e-09,87;UBERON:0002530,6.20e-09,65;UBERON:0005911,2.90e-08,69;UBERON:0000926,5.74e-08,120;UBERON:0004120,5.74e-08,120;UBERON:0006603,5.74e-08,120;UBERON:0000949,8.22e-08,72;UBERON:0001041,9.02e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,0.985521055061667,0.936258105287974,0.68487187290202,1.43589886191606,6.50562773738582,5.50748535239684,0.333109761815663,0.607425802169478,0.699561878128147,1.41957974411207,1.64537320326887,1.69755860719212,0.0850432901510698,0.893618560807968,0.522399578277871,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,2.09409497589519,1.17646297606203,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,2.84831672011889,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0.410082683163076,0.915112692826091,0,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74016680942267,0.405450430580328,0.308132871494482,0.77952493786677,1.25318686967237,1.78813219303138,1.68273629327956,1.47689527174577,2.1202954489111,1.447929326445,3.42809029465258,2.53390489923356,5.29165129021812,3.50630706544707,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p5@Traf3ip3 | |||
}} |
Revision as of 20:08, 13 September 2013
Short description: | p5@Traf3ip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Traf3ip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -51bp_to_ENSMUST00000043550, NM_153137, uc007eec.2_5end |
EntrezGene: | Traf3ip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.51e-11 | 9 |
alpha-beta T cell | 9.51e-11 | 9 |
immature T cell | 9.51e-11 | 9 |
mature T cell | 9.51e-11 | 9 |
immature alpha-beta T cell | 9.51e-11 | 9 |
T cell | 9.56e-09 | 11 |
pro-T cell | 9.56e-09 | 11 |
hematopoietic lineage restricted progenitor cell | 1.33e-08 | 25 |
CD4-positive, alpha-beta T cell | 4.16e-08 | 8 |
lymphoid lineage restricted progenitor cell | 5.41e-08 | 12 |
lymphocyte | 2.34e-07 | 13 |
common lymphoid progenitor | 2.34e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.