FFCP PHASE1:Mm9::chr12:77187706..77187736,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=122|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:77187706..77187736,+|id=chr12:77187706..77187736,+|ontology_enrichment_celltype=CL:0000791!2.13e-11!9;CL:0000789!2.13e-11!9;CL:0002420!2.13e-11!9;CL:0002419!2.13e-11!9;CL:0000790!2.13e-11!9;CL:0000624!4.74e-10!8;CL:0000838!5.84e-10!12;CL:0002031!2.07e-09!25;CL:0000542!5.52e-09!13;CL:0000051!5.52e-09!13;CL:0000084!6.83e-09!11;CL:0000827!6.83e-09!11;CL:0000893!1.75e-07!6;CL:0002489!1.75e-07!6;CL:0000898!1.75e-07!6;CL:0000809!1.75e-07!6;CL:0000810!1.75e-07!6;CL:0000895!1.75e-07!6;CL:0000808!1.75e-07!6;CL:0000894!1.75e-07!6;CL:0000806!1.75e-07!6;CL:0000807!1.75e-07!6;CL:0000805!1.75e-07!6;CL:0002425!1.75e-07!6;CL:0002436!1.75e-07!6;CL:0002427!1.75e-07!6;CL:0002428!1.75e-07!6;CL:0002429!1.75e-07!6;CL:0002433!1.75e-07!6;CL:0002431!1.75e-07!6;CL:0002432!1.75e-07!6|ontology_enrichment_celltype_v019_2=CL:0002031,6.71e-17,25;CL:0000791,2.32e-15,9;CL:0000789,2.32e-15,9;CL:0002420,2.32e-15,9;CL:0002419,2.32e-15,9;CL:0000790,2.32e-15,9;CL:0000838,5.01e-15,12;CL:0000542,8.34e-14,13;CL:0000051,8.34e-14,13;CL:0000988,8.93e-13,32;CL:0002032,8.93e-13,32;CL:0000037,8.93e-13,32;CL:0000837,8.93e-13,32;CL:0000084,1.82e-12,11;CL:0000827,1.82e-12,11;CL:0000624,3.81e-12,8;CL:0000553,1.22e-10,6;CL:0000556,1.22e-10,6;CL:0000738,2.36e-10,17;CL:0002087,2.36e-10,17;CL:0002320,2.72e-08,46;CL:0000134,2.72e-08,46;CL:0000050,4.10e-07,9;CL:0000219,8.89e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.57e-21!48;UBERON:0004177!8.37e-21!29;UBERON:0002390!3.85e-18!45;UBERON:0003061!3.85e-18!45;UBERON:0002370!1.23e-14!23;UBERON:0000974!1.23e-14!23;UBERON:0004807!1.23e-14!23;UBERON:0005058!1.23e-14!23;UBERON:0003351!1.23e-14!23;UBERON:0009113!1.23e-14!23;UBERON:0003295!1.23e-14!23;UBERON:0009722!1.23e-14!23;UBERON:0005562!1.23e-14!23;UBERON:0007690!1.23e-14!23;UBERON:0006562!8.59e-14!24;UBERON:0003408!8.59e-14!24;UBERON:0001557!8.59e-14!24;UBERON:0001042!8.59e-14!24;UBERON:0008814!8.59e-14!24;UBERON:0009145!8.59e-14!24;UBERON:0002405!3.70e-12!70;UBERON:0000065!4.05e-12!41;UBERON:0001004!1.17e-11!42;UBERON:0000072!1.20e-11!27;UBERON:0000063!2.59e-11!35;UBERON:0004119!3.29e-10!130;UBERON:0000925!3.29e-10!130;UBERON:0006595!3.29e-10!130;UBERON:0001007!6.58e-10!128;UBERON:0001555!6.58e-10!128;UBERON:0007026!6.58e-10!128;UBERON:0005057!1.69e-09!51;UBERON:0004921!7.44e-09!126;UBERON:0004185!7.44e-09!126;UBERON:0003081!2.53e-08!88;UBERON:0000064!9.80e-08!99;UBERON:0002106!1.06e-07!6;UBERON:0004457!1.06e-07!6;UBERON:0000042!1.06e-07!6;UBERON:0004854!1.06e-07!6;UBERON:0009034!1.06e-07!6;UBERON:0002095!1.06e-07!6;UBERON:0004782!1.06e-07!6;UBERON:0003281!1.06e-07!6;UBERON:0009664!1.06e-07!6;UBERON:0002296!1.06e-07!6;UBERON:0005602!1.06e-07!6;UBERON:0001179!1.06e-07!6;UBERON:0006293!1.06e-07!6;UBERON:0000077!3.22e-07!97;UBERON:0001041!6.89e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.45e-22,48;UBERON:0002405,3.45e-22,48;UBERON:0002390,5.33e-21,45;UBERON:0003061,5.33e-21,45;UBERON:0004177,3.29e-19,29;UBERON:0005057,3.29e-19,29;UBERON:0000077,1.63e-15,35;UBERON:0002370,2.05e-14,23;UBERON:0000974,2.05e-14,23;UBERON:0004807,2.05e-14,23;UBERON:0005058,2.05e-14,23;UBERON:0003351,2.05e-14,23;UBERON:0009113,2.05e-14,23;UBERON:0003295,2.05e-14,23;UBERON:0009722,2.05e-14,23;UBERON:0005562,2.05e-14,23;UBERON:0007690,2.05e-14,23;UBERON:0006562,9.57e-14,24;UBERON:0003408,9.57e-14,24;UBERON:0001557,9.57e-14,24;UBERON:0001042,9.57e-14,24;UBERON:0008814,9.57e-14,24;UBERON:0009145,9.57e-14,24;UBERON:0000072,4.89e-12,27;UBERON:0003081,2.41e-09,87;UBERON:0007811,1.28e-08,36;UBERON:0002384,2.72e-08,46;UBERON:0000065,2.27e-07,41;UBERON:0001004,3.72e-07,42;UBERON:0000153,5.95e-07,43|phase1_expression=0,0,0,0,0,0,0,3.87369970324729,0.703943610758334,1.40438715793196,0.171217968225505,0.0797721589953364,13.353656934634,16.4350356547715,0.999329285446988,1.41732687172878,0,9.77932712610537,9.04955261797876,4.66828616977833,0,0,0,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,3.62681071005672,9.07453257684653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,8.80388804400384,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.991256348951394,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0,0,0.44292937929755,0.318909537314974,0.655453258862952,0.345369963731791,0.289298117163023,0,0,1.47529281905711,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0.291480836629851,0,1.87957968877638,0.206386867963223,0.370389054739423,0.376736914009382,1.50363650493128,2.0590035588587,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.308132871494482,0.129920822977795,0.716106782669926,0,1.56254084375959,0.886137163047463,1.00966449948148,0.762068066549998,1.20991422164209,1.94915761479505,1.44317762460494,1.40252282617883,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:77187706..77187736,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=122 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:77187706..77187736,+ | |||
|id=chr12:77187706..77187736,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.13e-11!9;CL:0000789!2.13e-11!9;CL:0002420!2.13e-11!9;CL:0002419!2.13e-11!9;CL:0000790!2.13e-11!9;CL:0000624!4.74e-10!8;CL:0000838!5.84e-10!12;CL:0002031!2.07e-09!25;CL:0000542!5.52e-09!13;CL:0000051!5.52e-09!13;CL:0000084!6.83e-09!11;CL:0000827!6.83e-09!11;CL:0000893!1.75e-07!6;CL:0002489!1.75e-07!6;CL:0000898!1.75e-07!6;CL:0000809!1.75e-07!6;CL:0000810!1.75e-07!6;CL:0000895!1.75e-07!6;CL:0000808!1.75e-07!6;CL:0000894!1.75e-07!6;CL:0000806!1.75e-07!6;CL:0000807!1.75e-07!6;CL:0000805!1.75e-07!6;CL:0002425!1.75e-07!6;CL:0002436!1.75e-07!6;CL:0002427!1.75e-07!6;CL:0002428!1.75e-07!6;CL:0002429!1.75e-07!6;CL:0002433!1.75e-07!6;CL:0002431!1.75e-07!6;CL:0002432!1.75e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,6.71e-17,25;CL:0000791,2.32e-15,9;CL:0000789,2.32e-15,9;CL:0002420,2.32e-15,9;CL:0002419,2.32e-15,9;CL:0000790,2.32e-15,9;CL:0000838,5.01e-15,12;CL:0000542,8.34e-14,13;CL:0000051,8.34e-14,13;CL:0000988,8.93e-13,32;CL:0002032,8.93e-13,32;CL:0000037,8.93e-13,32;CL:0000837,8.93e-13,32;CL:0000084,1.82e-12,11;CL:0000827,1.82e-12,11;CL:0000624,3.81e-12,8;CL:0000553,1.22e-10,6;CL:0000556,1.22e-10,6;CL:0000738,2.36e-10,17;CL:0002087,2.36e-10,17;CL:0002320,2.72e-08,46;CL:0000134,2.72e-08,46;CL:0000050,4.10e-07,9;CL:0000219,8.89e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.57e-21!48;UBERON:0004177!8.37e-21!29;UBERON:0002390!3.85e-18!45;UBERON:0003061!3.85e-18!45;UBERON:0002370!1.23e-14!23;UBERON:0000974!1.23e-14!23;UBERON:0004807!1.23e-14!23;UBERON:0005058!1.23e-14!23;UBERON:0003351!1.23e-14!23;UBERON:0009113!1.23e-14!23;UBERON:0003295!1.23e-14!23;UBERON:0009722!1.23e-14!23;UBERON:0005562!1.23e-14!23;UBERON:0007690!1.23e-14!23;UBERON:0006562!8.59e-14!24;UBERON:0003408!8.59e-14!24;UBERON:0001557!8.59e-14!24;UBERON:0001042!8.59e-14!24;UBERON:0008814!8.59e-14!24;UBERON:0009145!8.59e-14!24;UBERON:0002405!3.70e-12!70;UBERON:0000065!4.05e-12!41;UBERON:0001004!1.17e-11!42;UBERON:0000072!1.20e-11!27;UBERON:0000063!2.59e-11!35;UBERON:0004119!3.29e-10!130;UBERON:0000925!3.29e-10!130;UBERON:0006595!3.29e-10!130;UBERON:0001007!6.58e-10!128;UBERON:0001555!6.58e-10!128;UBERON:0007026!6.58e-10!128;UBERON:0005057!1.69e-09!51;UBERON:0004921!7.44e-09!126;UBERON:0004185!7.44e-09!126;UBERON:0003081!2.53e-08!88;UBERON:0000064!9.80e-08!99;UBERON:0002106!1.06e-07!6;UBERON:0004457!1.06e-07!6;UBERON:0000042!1.06e-07!6;UBERON:0004854!1.06e-07!6;UBERON:0009034!1.06e-07!6;UBERON:0002095!1.06e-07!6;UBERON:0004782!1.06e-07!6;UBERON:0003281!1.06e-07!6;UBERON:0009664!1.06e-07!6;UBERON:0002296!1.06e-07!6;UBERON:0005602!1.06e-07!6;UBERON:0001179!1.06e-07!6;UBERON:0006293!1.06e-07!6;UBERON:0000077!3.22e-07!97;UBERON:0001041!6.89e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.45e-22,48;UBERON:0002405,3.45e-22,48;UBERON:0002390,5.33e-21,45;UBERON:0003061,5.33e-21,45;UBERON:0004177,3.29e-19,29;UBERON:0005057,3.29e-19,29;UBERON:0000077,1.63e-15,35;UBERON:0002370,2.05e-14,23;UBERON:0000974,2.05e-14,23;UBERON:0004807,2.05e-14,23;UBERON:0005058,2.05e-14,23;UBERON:0003351,2.05e-14,23;UBERON:0009113,2.05e-14,23;UBERON:0003295,2.05e-14,23;UBERON:0009722,2.05e-14,23;UBERON:0005562,2.05e-14,23;UBERON:0007690,2.05e-14,23;UBERON:0006562,9.57e-14,24;UBERON:0003408,9.57e-14,24;UBERON:0001557,9.57e-14,24;UBERON:0001042,9.57e-14,24;UBERON:0008814,9.57e-14,24;UBERON:0009145,9.57e-14,24;UBERON:0000072,4.89e-12,27;UBERON:0003081,2.41e-09,87;UBERON:0007811,1.28e-08,36;UBERON:0002384,2.72e-08,46;UBERON:0000065,2.27e-07,41;UBERON:0001004,3.72e-07,42;UBERON:0000153,5.95e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,3.87369970324729,0.703943610758334,1.40438715793196,0.171217968225505,0.0797721589953364,13.353656934634,16.4350356547715,0.999329285446988,1.41732687172878,0,9.77932712610537,9.04955261797876,4.66828616977833,0,0,0,0.319984845586813,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,3.62681071005672,9.07453257684653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,8.80388804400384,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.991256348951394,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0,0,0.44292937929755,0.318909537314974,0.655453258862952,0.345369963731791,0.289298117163023,0,0,1.47529281905711,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0.291480836629851,0,1.87957968877638,0.206386867963223,0.370389054739423,0.376736914009382,1.50363650493128,2.0590035588587,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.308132871494482,0.129920822977795,0.716106782669926,0,1.56254084375959,0.886137163047463,1.00966449948148,0.762068066549998,1.20991422164209,1.94915761479505,1.44317762460494,1.40252282617883,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:77187706..77187736,+ | |||
}} |
Revision as of 23:13, 12 September 2013
Short description: | p@chr12:77187706..77187736, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:77187706..77187736, + |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 6.71e-17 | 25 |
mature alpha-beta T cell | 2.32e-15 | 9 |
alpha-beta T cell | 2.32e-15 | 9 |
immature T cell | 2.32e-15 | 9 |
mature T cell | 2.32e-15 | 9 |
immature alpha-beta T cell | 2.32e-15 | 9 |
lymphoid lineage restricted progenitor cell | 5.01e-15 | 12 |
lymphocyte | 8.34e-14 | 13 |
common lymphoid progenitor | 8.34e-14 | 13 |
hematopoietic cell | 8.93e-13 | 32 |
hematopoietic oligopotent progenitor cell | 8.93e-13 | 32 |
hematopoietic stem cell | 8.93e-13 | 32 |
hematopoietic multipotent progenitor cell | 8.93e-13 | 32 |
T cell | 1.82e-12 | 11 |
pro-T cell | 1.82e-12 | 11 |
CD4-positive, alpha-beta T cell | 3.81e-12 | 8 |
megakaryocyte progenitor cell | 1.22e-10 | 6 |
megakaryocyte | 1.22e-10 | 6 |
leukocyte | 2.36e-10 | 17 |
nongranular leukocyte | 2.36e-10 | 17 |
connective tissue cell | 2.72e-08 | 46 |
mesenchymal cell | 2.72e-08 | 46 |
megakaryocyte-erythroid progenitor cell | 4.10e-07 | 9 |
motile cell | 8.89e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.45e-22 | 48 |
immune system | 3.45e-22 | 48 |
hematopoietic system | 5.33e-21 | 45 |
blood island | 5.33e-21 | 45 |
hemopoietic organ | 3.29e-19 | 29 |
immune organ | 3.29e-19 | 29 |
mixed endoderm/mesoderm-derived structure | 1.63e-15 | 35 |
thymus | 2.05e-14 | 23 |
neck | 2.05e-14 | 23 |
respiratory system epithelium | 2.05e-14 | 23 |
hemolymphoid system gland | 2.05e-14 | 23 |
pharyngeal epithelium | 2.05e-14 | 23 |
thymic region | 2.05e-14 | 23 |
pharyngeal gland | 2.05e-14 | 23 |
entire pharyngeal arch endoderm | 2.05e-14 | 23 |
thymus primordium | 2.05e-14 | 23 |
early pharyngeal endoderm | 2.05e-14 | 23 |
pharynx | 9.57e-14 | 24 |
gland of gut | 9.57e-14 | 24 |
upper respiratory tract | 9.57e-14 | 24 |
chordate pharynx | 9.57e-14 | 24 |
pharyngeal arch system | 9.57e-14 | 24 |
pharyngeal region of foregut | 9.57e-14 | 24 |
segment of respiratory tract | 4.89e-12 | 27 |
lateral plate mesoderm | 2.41e-09 | 87 |
craniocervical region | 1.28e-08 | 36 |
connective tissue | 2.72e-08 | 46 |
respiratory tract | 2.27e-07 | 41 |
respiratory system | 3.72e-07 | 42 |
anterior region of body | 5.95e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.