FFCP PHASE1:Mm9::chr6:91183788..91183800,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=326|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:91183788..91183800,+|id=chr6:91183788..91183800,+|ontology_enrichment_celltype=CL:0000680!5.98e-07!6;CL:0000183!5.98e-07!6;CL:0000187!5.98e-07!6;CL:0000056!5.98e-07!6|ontology_enrichment_celltype_v019_2=CL:0000680,1.80e-31,6;CL:0000187,1.80e-31,6;CL:0000056,1.80e-31,6;CL:0000222,5.29e-27,7;CL:0002494,1.19e-23,3;CL:0000737,1.19e-23,3;CL:0000746,1.19e-23,3;CL:0000513,1.19e-23,3;CL:0000355,4.91e-21,9;CL:0000192,8.12e-11,3;CL:0000359,8.12e-11,3;CL:0002539,8.12e-11,3;CL:0000514,8.12e-11,3;CL:0002092,9.09e-11,3;CL:0002540,9.09e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.91e-21,9;UBERON:0002036,4.91e-21,9;UBERON:0002385,4.91e-21,9;UBERON:0000486,4.91e-21,9;UBERON:0007503,4.91e-21,9;UBERON:0001015,4.91e-21,9;UBERON:0002329,4.91e-21,9;UBERON:0003082,4.91e-21,9;UBERON:0003059,4.91e-21,9;UBERON:0007282,4.91e-21,9;UBERON:0004290,4.91e-21,9;UBERON:0009618,4.91e-21,9;UBERON:0000383,6.07e-19,10;UBERON:0007524,3.14e-17,11;UBERON:0003077,3.14e-17,11;UBERON:0007285,3.14e-17,11;UBERON:0004535,1.70e-11,23;UBERON:0001009,1.70e-11,23;UBERON:0002204,4.45e-11,32;UBERON:0001135,8.12e-11,3;UBERON:0004237,8.12e-11,3;UBERON:0004695,8.12e-11,3;UBERON:0002111,8.12e-11,3;UBERON:0004178,8.12e-11,3;UBERON:0000947,2.46e-08,4;UBERON:0001637,2.46e-08,4;UBERON:0004573,2.46e-08,4;UBERON:0003509,2.46e-08,4;UBERON:0004571,2.46e-08,4;UBERON:0010191,2.46e-08,4;UBERON:0004572,2.46e-08,4;UBERON:0004872,6.22e-08,33;UBERON:0007100,5.80e-07,18;UBERON:0000948,5.80e-07,18;UBERON:0005498,5.80e-07,18;UBERON:0004140,5.80e-07,18;UBERON:0009881,5.80e-07,18;UBERON:0004141,5.80e-07,18;UBERON:0003084,5.80e-07,18;UBERON:0007005,5.80e-07,18;UBERON:0004139,5.80e-07,18;UBERON:0004291,5.80e-07,18;UBERON:0000055,7.75e-07,5;UBERON:0007500,7.75e-07,5;UBERON:0001981,7.75e-07,5;UBERON:0002049,7.75e-07,5;UBERON:0007798,7.75e-07,5;UBERON:0004537,7.75e-07,5;UBERON:0006965,7.75e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,1.92616169317078,0.734187008646726,1.56478268869608,0,0.219686182734472,0.777719596297134,1.81982348112971,0,0,0,0,11.0621557495457,8.02293631828519,5.15672092277442,0,0,0,0.677689064138264,0.889294796111139,2.2497492932035,1.97773272513395,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.37863096666592,0.604572480854284,0,0,0,0,0,0,0.140444420131752,0.681721290312231,0.779358013808606,0.35333957451034,0.14084341977668,2.56652954828636,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.587943535678524,0,0.247194967734374,0.433798070759735,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.468508622798644,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,1.17263029990548,0.180062061461015,0.710234206755631,0,0.462801338662135,0,0.536546802799238,0.350296027101508,0,0,0.243206428637567,0.146199987425332,0,0,0,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0,0,0.491804836130026,0.252470927204373,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0,0,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.484393280087717,0.241251699712623,0.119372344003136,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0,0.352071715937262,0,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0,0.19318959403219,0.563047426353546,1.09890974560359,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0.512200817262403,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0,0.952587382566147,0.463537303779422,0,0.824171801606613,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0.423073039458382,0,0,0.543216455383447,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0,0.499621155875892,0.233931608445408,0.214871054048298,0.57386499620653,0,0|short_description=p@chr6:91183788..91183800,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=326 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:91183788..91183800,+ | |||
|id=chr6:91183788..91183800,+ | |||
|ontology_enrichment_celltype=CL:0000680!5.98e-07!6;CL:0000183!5.98e-07!6;CL:0000187!5.98e-07!6;CL:0000056!5.98e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.80e-31,6;CL:0000187,1.80e-31,6;CL:0000056,1.80e-31,6;CL:0000222,5.29e-27,7;CL:0002494,1.19e-23,3;CL:0000737,1.19e-23,3;CL:0000746,1.19e-23,3;CL:0000513,1.19e-23,3;CL:0000355,4.91e-21,9;CL:0000192,8.12e-11,3;CL:0000359,8.12e-11,3;CL:0002539,8.12e-11,3;CL:0000514,8.12e-11,3;CL:0002092,9.09e-11,3;CL:0002540,9.09e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.91e-21,9;UBERON:0002036,4.91e-21,9;UBERON:0002385,4.91e-21,9;UBERON:0000486,4.91e-21,9;UBERON:0007503,4.91e-21,9;UBERON:0001015,4.91e-21,9;UBERON:0002329,4.91e-21,9;UBERON:0003082,4.91e-21,9;UBERON:0003059,4.91e-21,9;UBERON:0007282,4.91e-21,9;UBERON:0004290,4.91e-21,9;UBERON:0009618,4.91e-21,9;UBERON:0000383,6.07e-19,10;UBERON:0007524,3.14e-17,11;UBERON:0003077,3.14e-17,11;UBERON:0007285,3.14e-17,11;UBERON:0004535,1.70e-11,23;UBERON:0001009,1.70e-11,23;UBERON:0002204,4.45e-11,32;UBERON:0001135,8.12e-11,3;UBERON:0004237,8.12e-11,3;UBERON:0004695,8.12e-11,3;UBERON:0002111,8.12e-11,3;UBERON:0004178,8.12e-11,3;UBERON:0000947,2.46e-08,4;UBERON:0001637,2.46e-08,4;UBERON:0004573,2.46e-08,4;UBERON:0003509,2.46e-08,4;UBERON:0004571,2.46e-08,4;UBERON:0010191,2.46e-08,4;UBERON:0004572,2.46e-08,4;UBERON:0004872,6.22e-08,33;UBERON:0007100,5.80e-07,18;UBERON:0000948,5.80e-07,18;UBERON:0005498,5.80e-07,18;UBERON:0004140,5.80e-07,18;UBERON:0009881,5.80e-07,18;UBERON:0004141,5.80e-07,18;UBERON:0003084,5.80e-07,18;UBERON:0007005,5.80e-07,18;UBERON:0004139,5.80e-07,18;UBERON:0004291,5.80e-07,18;UBERON:0000055,7.75e-07,5;UBERON:0007500,7.75e-07,5;UBERON:0001981,7.75e-07,5;UBERON:0002049,7.75e-07,5;UBERON:0007798,7.75e-07,5;UBERON:0004537,7.75e-07,5;UBERON:0006965,7.75e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,1.92616169317078,0.734187008646726,1.56478268869608,0,0.219686182734472,0.777719596297134,1.81982348112971,0,0,0,0,11.0621557495457,8.02293631828519,5.15672092277442,0,0,0,0.677689064138264,0.889294796111139,2.2497492932035,1.97773272513395,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.37863096666592,0.604572480854284,0,0,0,0,0,0,0.140444420131752,0.681721290312231,0.779358013808606,0.35333957451034,0.14084341977668,2.56652954828636,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.587943535678524,0,0.247194967734374,0.433798070759735,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.468508622798644,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,1.17263029990548,0.180062061461015,0.710234206755631,0,0.462801338662135,0,0.536546802799238,0.350296027101508,0,0,0.243206428637567,0.146199987425332,0,0,0,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0,0,0.491804836130026,0.252470927204373,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0,0,0,0.35613120733451,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.484393280087717,0.241251699712623,0.119372344003136,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0,0.352071715937262,0,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0,0.19318959403219,0.563047426353546,1.09890974560359,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0.512200817262403,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0,0.952587382566147,0.463537303779422,0,0.824171801606613,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0.423073039458382,0,0,0.543216455383447,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0,0.499621155875892,0.233931608445408,0.214871054048298,0.57386499620653,0,0 | |||
|short_description=p@chr6:91183788..91183800,+ | |||
}} |
Revision as of 10:58, 14 September 2013
Short description: | p@chr6:91183788..91183800, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:91183788..91183800, + |
Coexpression cluster: | MCL_coexpression_mm9:326 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.80e-31 | 6 |
muscle cell | 1.80e-31 | 6 |
myoblast | 1.80e-31 | 6 |
mesodermal cell | 5.29e-27 | 7 |
cardiocyte | 1.19e-23 | 3 |
striated muscle cell | 1.19e-23 | 3 |
cardiac muscle cell | 1.19e-23 | 3 |
cardiac muscle myoblast | 1.19e-23 | 3 |
multi-potent skeletal muscle stem cell | 4.91e-21 | 9 |
smooth muscle cell | 8.12e-11 | 3 |
vascular associated smooth muscle cell | 8.12e-11 | 3 |
aortic smooth muscle cell | 8.12e-11 | 3 |
smooth muscle myoblast | 8.12e-11 | 3 |
bone marrow cell | 9.09e-11 | 3 |
mesenchymal stem cell of the bone marrow | 9.09e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.