FFCP PHASE1:Mm9::chr7:105640459..105640471,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:105640459..105640471,+|id=chr7:105640459..105640471,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,1.28e-17,7;CL:0000680,5.29e-12,6;CL:0000187,5.29e-12,6;CL:0000056,5.29e-12,6;CL:0002494,3.67e-11,3;CL:0000737,3.67e-11,3;CL:0000746,3.67e-11,3;CL:0000513,3.67e-11,3;CL:0000815,4.39e-09,1;CL:0000792,4.39e-09,1;CL:0000213,7.41e-09,1;CL:0002078,7.41e-09,1;CL:0000115,7.41e-09,1;CL:0002262,7.41e-09,1;CL:1000398,7.41e-09,1;CL:0000355,3.48e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,7.41e-09,1;UBERON:0001281,7.41e-09,1;UBERON:0000353,7.41e-09,1;UBERON:0003497,7.41e-09,1;UBERON:0003909,7.41e-09,1;UBERON:0003928,7.41e-09,1;UBERON:0003835,7.41e-09,1;UBERON:0003513,7.41e-09,1;UBERON:0001280,7.41e-09,1;UBERON:0004647,7.41e-09,1;UBERON:0002294,7.41e-09,1;UBERON:0001173,7.41e-09,1;UBERON:0004912,7.41e-09,1;UBERON:0005171,7.41e-09,1;UBERON:0001134,3.48e-08,9;UBERON:0002036,3.48e-08,9;UBERON:0002385,3.48e-08,9;UBERON:0000486,3.48e-08,9;UBERON:0007503,3.48e-08,9;UBERON:0001015,3.48e-08,9;UBERON:0002329,3.48e-08,9;UBERON:0003082,3.48e-08,9;UBERON:0003059,3.48e-08,9;UBERON:0007282,3.48e-08,9;UBERON:0004290,3.48e-08,9;UBERON:0009618,3.48e-08,9;UBERON:0000383,2.04e-07,10;UBERON:0000055,6.34e-07,5;UBERON:0007500,6.34e-07,5;UBERON:0001981,6.34e-07,5;UBERON:0002049,6.34e-07,5;UBERON:0007798,6.34e-07,5;UBERON:0004537,6.34e-07,5;UBERON:0006965,6.34e-07,5;UBERON:0007524,8.70e-07,11;UBERON:0003077,8.70e-07,11;UBERON:0007285,8.70e-07,11|phase1_expression=0,0,0,0,0,0,0,5.03580961422147,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,2.38610777810186,1.56478268869608,0,0,0,0.55994568650145,0,0,0,0,4.11615097657515,4.01146815914259,0,0,0,0,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0.982430281388212,2.6087803983151,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0.125654352112864,0,0,0.83115217823824,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324275238183423,0,0.219550115291051,0.268412837520744,0,0,0,0.528901133327089,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.442830443938806,0.156998727841375,0.740382983530803,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0.983528546038072,0,0.160550589987792,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0,0,0,1.40803024838226,0.21183207086382,0,0.65954501176592,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.582961673259701,0.370850604021019,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0.448569283047378,1.00730769818447,0.386379188064381,0.750729901804728,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p@chr7:105640459..105640471,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:105640459..105640471,+ | |||
|id=chr7:105640459..105640471,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.28e-17,7;CL:0000680,5.29e-12,6;CL:0000187,5.29e-12,6;CL:0000056,5.29e-12,6;CL:0002494,3.67e-11,3;CL:0000737,3.67e-11,3;CL:0000746,3.67e-11,3;CL:0000513,3.67e-11,3;CL:0000815,4.39e-09,1;CL:0000792,4.39e-09,1;CL:0000213,7.41e-09,1;CL:0002078,7.41e-09,1;CL:0000115,7.41e-09,1;CL:0002262,7.41e-09,1;CL:1000398,7.41e-09,1;CL:0000355,3.48e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,7.41e-09,1;UBERON:0001281,7.41e-09,1;UBERON:0000353,7.41e-09,1;UBERON:0003497,7.41e-09,1;UBERON:0003909,7.41e-09,1;UBERON:0003928,7.41e-09,1;UBERON:0003835,7.41e-09,1;UBERON:0003513,7.41e-09,1;UBERON:0001280,7.41e-09,1;UBERON:0004647,7.41e-09,1;UBERON:0002294,7.41e-09,1;UBERON:0001173,7.41e-09,1;UBERON:0004912,7.41e-09,1;UBERON:0005171,7.41e-09,1;UBERON:0001134,3.48e-08,9;UBERON:0002036,3.48e-08,9;UBERON:0002385,3.48e-08,9;UBERON:0000486,3.48e-08,9;UBERON:0007503,3.48e-08,9;UBERON:0001015,3.48e-08,9;UBERON:0002329,3.48e-08,9;UBERON:0003082,3.48e-08,9;UBERON:0003059,3.48e-08,9;UBERON:0007282,3.48e-08,9;UBERON:0004290,3.48e-08,9;UBERON:0009618,3.48e-08,9;UBERON:0000383,2.04e-07,10;UBERON:0000055,6.34e-07,5;UBERON:0007500,6.34e-07,5;UBERON:0001981,6.34e-07,5;UBERON:0002049,6.34e-07,5;UBERON:0007798,6.34e-07,5;UBERON:0004537,6.34e-07,5;UBERON:0006965,6.34e-07,5;UBERON:0007524,8.70e-07,11;UBERON:0003077,8.70e-07,11;UBERON:0007285,8.70e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,5.03580961422147,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,2.38610777810186,1.56478268869608,0,0,0,0.55994568650145,0,0,0,0,4.11615097657515,4.01146815914259,0,0,0,0,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0.982430281388212,2.6087803983151,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0.125654352112864,0,0,0.83115217823824,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324275238183423,0,0.219550115291051,0.268412837520744,0,0,0,0.528901133327089,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.442830443938806,0.156998727841375,0.740382983530803,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0.983528546038072,0,0.160550589987792,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,1.03135543248187,0,0,0,0,0,0,0,0,1.40803024838226,0.21183207086382,0,0.65954501176592,0.161464426695906,0.0603129249281559,0,0.164140899745061,0.582961673259701,0.370850604021019,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0.448569283047378,1.00730769818447,0.386379188064381,0.750729901804728,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr7:105640459..105640471,+ | |||
}} |
Revision as of 11:11, 14 September 2013
Short description: | p@chr7:105640459..105640471, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:105640459..105640471, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.28e-17 | 7 |
muscle precursor cell | 5.29e-12 | 6 |
muscle cell | 5.29e-12 | 6 |
myoblast | 5.29e-12 | 6 |
cardiocyte | 3.67e-11 | 3 |
striated muscle cell | 3.67e-11 | 3 |
cardiac muscle cell | 3.67e-11 | 3 |
cardiac muscle myoblast | 3.67e-11 | 3 |
regulatory T cell | 4.39e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.39e-09 | 1 |
lining cell | 7.41e-09 | 1 |
meso-epithelial cell | 7.41e-09 | 1 |
endothelial cell | 7.41e-09 | 1 |
endothelial cell of sinusoid | 7.41e-09 | 1 |
endothelial cell of hepatic sinusoid | 7.41e-09 | 1 |
multi-potent skeletal muscle stem cell | 3.48e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 7.41e-09 | 1 |
hepatic sinusoid | 7.41e-09 | 1 |
parenchyma | 7.41e-09 | 1 |
abdomen blood vessel | 7.41e-09 | 1 |
sinusoid | 7.41e-09 | 1 |
digestive system duct | 7.41e-09 | 1 |
abdominal segment blood vessel | 7.41e-09 | 1 |
trunk blood vessel | 7.41e-09 | 1 |
liver parenchyma | 7.41e-09 | 1 |
liver lobule | 7.41e-09 | 1 |
biliary system | 7.41e-09 | 1 |
biliary tree | 7.41e-09 | 1 |
biliary bud | 7.41e-09 | 1 |
hepatic duct | 7.41e-09 | 1 |
skeletal muscle tissue | 3.48e-08 | 9 |
striated muscle tissue | 3.48e-08 | 9 |
muscle tissue | 3.48e-08 | 9 |
multilaminar epithelium | 3.48e-08 | 9 |
epithelial vesicle | 3.48e-08 | 9 |
musculature | 3.48e-08 | 9 |
somite | 3.48e-08 | 9 |
myotome | 3.48e-08 | 9 |
presomitic mesoderm | 3.48e-08 | 9 |
presumptive segmental plate | 3.48e-08 | 9 |
dermomyotome | 3.48e-08 | 9 |
trunk paraxial mesoderm | 3.48e-08 | 9 |
musculature of body | 2.04e-07 | 10 |
vessel | 6.34e-07 | 5 |
epithelial tube open at both ends | 6.34e-07 | 5 |
blood vessel | 6.34e-07 | 5 |
vasculature | 6.34e-07 | 5 |
vascular system | 6.34e-07 | 5 |
blood vasculature | 6.34e-07 | 5 |
vascular cord | 6.34e-07 | 5 |
dense mesenchyme tissue | 8.70e-07 | 11 |
paraxial mesoderm | 8.70e-07 | 11 |
presumptive paraxial mesoderm | 8.70e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.