FFCP PHASE1:Mm9::chr16:91597881..91597980,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77975|HGNC=|MCL_coexpression_id=1382|UniProt=D6RJK9,Q9D1X9|association_with_transcript=0bp_to_ENSMUST00000133180,NM_030018,uc007zxr.1_5end|description=CAGE_peak_1_at_Tmem50b_5end|id=chr16:91597881..91597980,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.02e-14!51;UBERON:0001049!2.23e-11!52;UBERON:0005068!2.23e-11!52;UBERON:0006241!2.23e-11!52;UBERON:0007135!2.23e-11!52;UBERON:0000955!7.54e-11!50;UBERON:0006238!7.54e-11!50;UBERON:0002616!1.89e-10!49;UBERON:0000033!1.59e-09!63;UBERON:0001017!6.49e-09!73;UBERON:0005743!6.49e-09!73;UBERON:0000073!1.14e-08!75;UBERON:0001016!1.14e-08!75;UBERON:0004121!1.60e-08!102;UBERON:0000924!1.60e-08!102;UBERON:0006601!1.60e-08!102;UBERON:0002346!2.85e-08!71;UBERON:0003075!2.85e-08!71;UBERON:0007284!2.85e-08!71;UBERON:0002020!4.18e-08!34;UBERON:0003080!1.26e-07!40;UBERON:0000480!1.86e-07!308;UBERON:0000467!1.86e-07!308;UBERON:0004111!3.38e-07!122;UBERON:0002780!3.61e-07!39;UBERON:0001890!3.61e-07!39;UBERON:0006240!3.61e-07!39;UBERON:0002791!5.54e-07!29;UBERON:0003528!5.54e-07!29;UBERON:0001893!5.54e-07!29;UBERON:0000062!8.53e-07!269|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.02e-14,51;UBERON:0000073,1.14e-11,54;UBERON:0001049,2.23e-11,52;UBERON:0005068,2.23e-11,52;UBERON:0006241,2.23e-11,52;UBERON:0007135,2.23e-11,52;UBERON:0010314,8.84e-11,92;UBERON:0000955,4.92e-10,47;UBERON:0006238,4.92e-10,47;UBERON:0002616,1.21e-09,46;UBERON:0010371,3.06e-09,73;UBERON:0001017,6.49e-09,73;UBERON:0001016,1.14e-08,75;UBERON:0004121,1.63e-08,95;UBERON:0000924,1.63e-08,95;UBERON:0006601,1.63e-08,95;UBERON:0002346,1.92e-08,64;UBERON:0003075,1.92e-08,64;UBERON:0007284,1.92e-08,64;UBERON:0002020,4.18e-08,34;UBERON:0003080,1.26e-07,40;UBERON:0004111,3.38e-07,122;UBERON:0002780,3.61e-07,39;UBERON:0001890,3.61e-07,39;UBERON:0006240,3.61e-07,39;UBERON:0003528,5.54e-07,29;UBERON:0002791,5.54e-07,29;UBERON:0001893,5.54e-07,29|phase1_expression=34.7522998217403,35.5954915792148,32.7599452360466,51.7213801334679,50.0895729946347,15.1091344720701,19.8570744506197,30.2148576853288,33.2261384277934,51.9623248434826,6.67750076079469,10.0512920334124,28.0769197087177,38.9020790764538,7.99463428357591,13.1608923803387,10.4934281719222,37.6977287603094,38.6662702768183,39.4682376172168,67.9495888307048,37.9291433587382,33.6947727989227,59.5171812791473,52.7641346454491,21.8208146363708,31.0148637234534,30.8123862740821,69.5485715210328,57.7148997150241,48.5589818335117,3.17515336729816,3.69038872550742,15.8481681015439,12.1317680295535,21.1117999605285,13.4751775133164,231.44799179751,198.459177509045,208.362450101572,223.527965451785,253.409874919583,255.378445694387,26.0606413209445,22.6070556619517,15.2343804294196,28.1660883965294,63.6633456630904,92.4878829312126,73.8833616482277,34.4366597198392,35.9381410912429,46.3079992719352,32.6412963905105,37.642505503956,26.4977219117025,19.1977404758967,26.814948798427,41.6771909370771,47.0801971552109,34.2268957893337,23.7191172448392,24.0109594950008,70.6421278065898,59.3319817540185,61.1012898853646,44.3408163567239,61.0907105461272,71.3384532682326,50.627226874384,67.3039876324422,72.5553500385661,50.7997644188711,29.7652642092338,26.9325773561244,37.6879702510109,37.4393995397922,74.9524674560052,76.8032666281217,34.4223210975806,38.6077856002169,27.6084086395083,97.1556836524806,64.7177001536432,72.1207729506544,42.4265163082082,54.5283537460564,62.630213797301,22.1120484532897,36.0476341709367,39.4215704634282,23.2314446784974,4.75979933595425,5.39703191637817,8.4470934268197,7.6164570806547,36.796438074519,27.2688516124892,21.3024523774352,18.726997449048,44.6473640692077,10.2661181931454,5.09610479413291,14.2213340630666,12.9894624606728,12.6679932737549,12.1325866803548,36.3104737506611,70.4311043520307,65.3145411885229,19.2568712710411,28.3152894830291,30.2106301405437,30.1445281105245,29.1619993696548,68.6139588660028,21.2587672251562,107.437322191494,73.4226758118396,17.9561203441624,28.2677143629304,24.2437626567611,104.379386282148,101.302155765995,91.3187641706664,80.4689723907063,21.5667224110656,24.5960119707297,31.386346087047,105.752191419805,73.2000964509802,42.4711710141482,85.5215655346,77.7374990284205,103.270658146101,86.6368344781826,15.0722258498468,50.6336370383079,145.315586099363,80.809672660406,20.5590299881072,18.3921683546778,21.2473313170312,22.3043130396858,23.7447382038134,23.060469651273,24.8309570083281,62.0888089773638,16.8143034487617,19.2888201771176,20.762232651346,17.9740500590611,22.2437799380478,28.5566776548177,33.1309239616789,20.5005294823048,33.7062329910353,31.9111404822247,42.9086884087345,37.9040163739968,30.7229138575236,36.012412292203,36.6954340157076,37.5819682637541,42.7319902698038,45.8091871158303,44.2651112309372,32.9278265475418,52.4945921224003,70.2636746258528,81.6362912126767,100.877991323479,104.066754647958,81.4632961875457,83.0645296828303,48.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| ||
|EntrezGene=77975 | |||
|HGNC= | |||
|MCL_coexpression_id=1382 | |||
|UniProt=D6RJK9,Q9D1X9 | |||
|association_with_transcript=0bp_to_ENSMUST00000133180,NM_030018,uc007zxr.1_5end | |||
|description=CAGE_peak_1_at_Tmem50b_5end | |||
|id=chr16:91597881..91597980,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-14!51;UBERON:0001049!2.23e-11!52;UBERON:0005068!2.23e-11!52;UBERON:0006241!2.23e-11!52;UBERON:0007135!2.23e-11!52;UBERON:0000955!7.54e-11!50;UBERON:0006238!7.54e-11!50;UBERON:0002616!1.89e-10!49;UBERON:0000033!1.59e-09!63;UBERON:0001017!6.49e-09!73;UBERON:0005743!6.49e-09!73;UBERON:0000073!1.14e-08!75;UBERON:0001016!1.14e-08!75;UBERON:0004121!1.60e-08!102;UBERON:0000924!1.60e-08!102;UBERON:0006601!1.60e-08!102;UBERON:0002346!2.85e-08!71;UBERON:0003075!2.85e-08!71;UBERON:0007284!2.85e-08!71;UBERON:0002020!4.18e-08!34;UBERON:0003080!1.26e-07!40;UBERON:0000480!1.86e-07!308;UBERON:0000467!1.86e-07!308;UBERON:0004111!3.38e-07!122;UBERON:0002780!3.61e-07!39;UBERON:0001890!3.61e-07!39;UBERON:0006240!3.61e-07!39;UBERON:0002791!5.54e-07!29;UBERON:0003528!5.54e-07!29;UBERON:0001893!5.54e-07!29;UBERON:0000062!8.53e-07!269 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.02e-14,51;UBERON:0000073,1.14e-11,54;UBERON:0001049,2.23e-11,52;UBERON:0005068,2.23e-11,52;UBERON:0006241,2.23e-11,52;UBERON:0007135,2.23e-11,52;UBERON:0010314,8.84e-11,92;UBERON:0000955,4.92e-10,47;UBERON:0006238,4.92e-10,47;UBERON:0002616,1.21e-09,46;UBERON:0010371,3.06e-09,73;UBERON:0001017,6.49e-09,73;UBERON:0001016,1.14e-08,75;UBERON:0004121,1.63e-08,95;UBERON:0000924,1.63e-08,95;UBERON:0006601,1.63e-08,95;UBERON:0002346,1.92e-08,64;UBERON:0003075,1.92e-08,64;UBERON:0007284,1.92e-08,64;UBERON:0002020,4.18e-08,34;UBERON:0003080,1.26e-07,40;UBERON:0004111,3.38e-07,122;UBERON:0002780,3.61e-07,39;UBERON:0001890,3.61e-07,39;UBERON:0006240,3.61e-07,39;UBERON:0003528,5.54e-07,29;UBERON:0002791,5.54e-07,29;UBERON:0001893,5.54e-07,29 | |||
|phase1_expression=34.7522998217403,35.5954915792148,32.7599452360466,51.7213801334679,50.0895729946347,15.1091344720701,19.8570744506197,30.2148576853288,33.2261384277934,51.9623248434826,6.67750076079469,10.0512920334124,28.0769197087177,38.9020790764538,7.99463428357591,13.1608923803387,10.4934281719222,37.6977287603094,38.6662702768183,39.4682376172168,67.9495888307048,37.9291433587382,33.6947727989227,59.5171812791473,52.7641346454491,21.8208146363708,31.0148637234534,30.8123862740821,69.5485715210328,57.7148997150241,48.5589818335117,3.17515336729816,3.69038872550742,15.8481681015439,12.1317680295535,21.1117999605285,13.4751775133164,231.44799179751,198.459177509045,208.362450101572,223.527965451785,253.409874919583,255.378445694387,26.0606413209445,22.6070556619517,15.2343804294196,28.1660883965294,63.6633456630904,92.4878829312126,73.8833616482277,34.4366597198392,35.9381410912429,46.3079992719352,32.6412963905105,37.642505503956,26.4977219117025,19.1977404758967,26.814948798427,41.6771909370771,47.0801971552109,34.2268957893337,23.7191172448392,24.0109594950008,70.6421278065898,59.3319817540185,61.1012898853646,44.3408163567239,61.0907105461272,71.3384532682326,50.627226874384,67.3039876324422,72.5553500385661,50.7997644188711,29.7652642092338,26.9325773561244,37.6879702510109,37.4393995397922,74.9524674560052,76.8032666281217,34.4223210975806,38.6077856002169,27.6084086395083,97.1556836524806,64.7177001536432,72.1207729506544,42.4265163082082,54.5283537460564,62.630213797301,22.1120484532897,36.0476341709367,39.4215704634282,23.2314446784974,4.75979933595425,5.39703191637817,8.4470934268197,7.6164570806547,36.796438074519,27.2688516124892,21.3024523774352,18.726997449048,44.6473640692077,10.2661181931454,5.09610479413291,14.2213340630666,12.9894624606728,12.6679932737549,12.1325866803548,36.3104737506611,70.4311043520307,65.3145411885229,19.2568712710411,28.3152894830291,30.2106301405437,30.1445281105245,29.1619993696548,68.6139588660028,21.2587672251562,107.437322191494,73.4226758118396,17.9561203441624,28.2677143629304,24.2437626567611,104.379386282148,101.302155765995,91.3187641706664,80.4689723907063,21.5667224110656,24.5960119707297,31.386346087047,105.752191419805,73.2000964509802,42.4711710141482,85.5215655346,77.7374990284205,103.270658146101,86.6368344781826,15.0722258498468,50.6336370383079,145.315586099363,80.809672660406,20.5590299881072,18.3921683546778,21.2473313170312,22.3043130396858,23.7447382038134,23.060469651273,24.8309570083281,62.0888089773638,16.8143034487617,19.2888201771176,20.762232651346,17.9740500590611,22.2437799380478,28.5566776548177,33.1309239616789,20.5005294823048,33.7062329910353,31.9111404822247,42.9086884087345,37.9040163739968,30.7229138575236,36.012412292203,36.6954340157076,37.5819682637541,42.7319902698038,45.8091871158303,44.2651112309372,32.9278265475418,52.4945921224003,70.2636746258528,81.6362912126767,100.877991323479,104.066754647958,81.4632961875457,83.0645296828303,48.1593585935051,149.67970869166,51.5678604993911,14.7168892869311,13.7019636397659,13.2733485161756,16.9414160683608,24.2392067790909,30.4361001780095,49.3510224006292,30.139908714494,27.1442025504291,30.4403402222961,34.7036075072034,41.3456927980942,54.0345124686736,67.5088916332305,19.7254616991205,19.0795016058247,24.7957018480777,21.1797380959127,22.1105835371093,30.2285383727273,29.1520436142826,54.910975048412,52.5945738268606,43.4358017004738,20.1587786419261,5.6727335943472,4.91397487783007,6.74586337154561,6.49152388443209,14.2294524253926,11.9674150337267,18.9879450717535,15.4028465436284,11.2570179407113,7.18841032636773,15.6299198020771,12.1694692514679,11.1134706296729,9.50806291666135,8.68398338454061,158.33348397278,18.380666941737,19.066902243717,16.2955282344181,23.4690248288502,58.6271901046355,113.784860343515,110.640778335372,93.6352755990774,87.0356230319685,89.7730347541652,129.288155310717,139.356780365778,140.309586824066,40.7136466636035,47.3197944922277,61.4705341273795,41.9423854383193,138.394608569477,126.588621519579,19.180388609071,40.9002902071084,21.4545589203055,18.7410597262386,26.9279247165999,17.2057534525837,13.1451217708613,13.3045969470751,20.6453457854196,20.7501659117031,18.5785255634866,73.5825814605938,57.9115547649736,23.5046596840777,22.9670612688542,56.5847521795797,29.2039304347918,11.6534705354391,17.5347663039556,21.8781892516842,30.4160949667196,29.2063390546731,21.1911200397941,14.9048829085777,18.8943610543902,32.2357493094532,60.0886068877493,30.9406629744561,61.6195686414356,19.4465981553815,24.8368672862889,25.5061071687595,31.3892213546824,29.7875925395458,44.2636865419705,53.5858310441695,18.3043932289694,25.2080164327946,85.5650184453252,38.9131556941893,41.4963576608477,36.7908842061751,37.4829160169849,35.6185752446783,44.3050871677373,130.539412615399,28.3645662124435,21.4642342681751,29.2607353244144,18.0833718724503,17.2234726928492,16.4720284708696,12.918360679533,17.9137858974282,17.5513966731618,147.019275174327,17.714815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| |||
|short_description=p1@Tmem50b | |||
}} | |||
Revision as of 13:18, 13 September 2013
| Short description: | p1@Tmem50b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tmem50b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1382 |
| Association with transcript: | 0bp_to_ENSMUST00000133180, NM_030018, uc007zxr.1_5end |
| EntrezGene: | Tmem50b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.02e-14 | 51 |
| regional part of nervous system | 1.14e-11 | 54 |
| neural tube | 2.23e-11 | 52 |
| neural rod | 2.23e-11 | 52 |
| future spinal cord | 2.23e-11 | 52 |
| neural keel | 2.23e-11 | 52 |
| structure with developmental contribution from neural crest | 8.84e-11 | 92 |
| brain | 4.92e-10 | 47 |
| future brain | 4.92e-10 | 47 |
| regional part of brain | 1.21e-09 | 46 |
| ecto-epithelium | 3.06e-09 | 73 |
| central nervous system | 6.49e-09 | 73 |
| nervous system | 1.14e-08 | 75 |
| ectoderm-derived structure | 1.63e-08 | 95 |
| ectoderm | 1.63e-08 | 95 |
| presumptive ectoderm | 1.63e-08 | 95 |
| neurectoderm | 1.92e-08 | 64 |
| neural plate | 1.92e-08 | 64 |
| presumptive neural plate | 1.92e-08 | 64 |
| gray matter | 4.18e-08 | 34 |
| anterior neural tube | 1.26e-07 | 40 |
| anatomical conduit | 3.38e-07 | 122 |
| regional part of forebrain | 3.61e-07 | 39 |
| forebrain | 3.61e-07 | 39 |
| future forebrain | 3.61e-07 | 39 |
| brain grey matter | 5.54e-07 | 29 |
| regional part of telencephalon | 5.54e-07 | 29 |
| telencephalon | 5.54e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
