FFCP PHASE1:Mm9::chr9:55937822..55937867,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19200|HGNC=|MCL_coexpression_id=3|UniProt=P97814|association_with_transcript=39bp_to_ENSMUST00000138646,ENSMUST00000147360,NM_011193,uc009psv.2_5end|description=CAGE_peak_1_at_Pstpip1_5end|id=chr9:55937822..55937867,+|ontology_enrichment_celltype=CL:0000988!9.41e-10!32;CL:0002032!9.41e-10!32;CL:0000037!9.41e-10!32;CL:0000566!9.41e-10!32;CL:0000837!9.41e-10!32;CL:0000738!8.83e-08!17;CL:0002087!8.83e-08!17;CL:0002031!2.77e-07!25;CL:0000838!5.61e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,4.08e-12,32;CL:0002032,4.08e-12,32;CL:0000037,4.08e-12,32;CL:0000837,4.08e-12,32;CL:0002031,2.76e-09,25;CL:0000738,5.15e-09,17;CL:0002087,5.15e-09,17;CL:0000838,2.47e-08,12;CL:0002320,2.61e-08,46;CL:0000134,2.61e-08,46;CL:0000084,9.06e-08,11;CL:0000827,9.06e-08,11;CL:0000542,2.50e-07,13;CL:0000051,2.50e-07,13;CL:0000791,6.80e-07,9;CL:0000789,6.80e-07,9;CL:0002420,6.80e-07,9;CL:0002419,6.80e-07,9;CL:0000790,6.80e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.24e-18!48;UBERON:0002390!1.32e-17!45;UBERON:0003061!1.32e-17!45;UBERON:0002405!4.83e-14!70;UBERON:0003081!1.64e-12!88;UBERON:0004177!1.27e-10!29;UBERON:0000926!6.27e-09!193;UBERON:0004120!6.27e-09!193;UBERON:0006603!6.27e-09!193;UBERON:0003408!3.33e-08!24;UBERON:0002204!3.80e-08!32;UBERON:0006562!5.50e-08!24;UBERON:0001557!5.50e-08!24;UBERON:0001042!5.50e-08!24;UBERON:0008814!5.50e-08!24;UBERON:0009145!5.50e-08!24;UBERON:0002370!6.36e-08!23;UBERON:0000974!6.36e-08!23;UBERON:0004807!6.36e-08!23;UBERON:0005058!6.36e-08!23;UBERON:0003351!6.36e-08!23;UBERON:0009113!6.36e-08!23;UBERON:0003295!6.36e-08!23;UBERON:0009722!6.36e-08!23;UBERON:0005562!6.36e-08!23;UBERON:0007690!6.36e-08!23;UBERON:0002371!7.15e-08!16;UBERON:0001474!1.71e-07!22;UBERON:0004765!1.71e-07!22;UBERON:0001434!1.71e-07!22;UBERON:0005057!1.73e-07!51;UBERON:0001004!2.06e-07!42;UBERON:0000065!3.82e-07!41;UBERON:0000072!9.96e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.52e-22,45;UBERON:0003061,2.52e-22,45;UBERON:0002193,3.29e-22,48;UBERON:0002405,3.29e-22,48;UBERON:0004177,4.17e-14,29;UBERON:0005057,4.17e-14,29;UBERON:0000077,5.30e-14,35;UBERON:0003081,8.69e-13,87;UBERON:0003408,5.07e-11,24;UBERON:0006562,9.89e-11,24;UBERON:0001557,9.89e-11,24;UBERON:0001042,9.89e-11,24;UBERON:0008814,9.89e-11,24;UBERON:0009145,9.89e-11,24;UBERON:0002370,1.13e-10,23;UBERON:0000974,1.13e-10,23;UBERON:0004807,1.13e-10,23;UBERON:0005058,1.13e-10,23;UBERON:0003351,1.13e-10,23;UBERON:0009113,1.13e-10,23;UBERON:0003295,1.13e-10,23;UBERON:0009722,1.13e-10,23;UBERON:0005562,1.13e-10,23;UBERON:0007690,1.13e-10,23;UBERON:0000926,2.39e-10,120;UBERON:0004120,2.39e-10,120;UBERON:0006603,2.39e-10,120;UBERON:0000072,3.25e-09,27;UBERON:0001474,3.27e-09,22;UBERON:0004765,3.27e-09,22;UBERON:0001434,3.27e-09,22;UBERON:0001004,3.66e-09,42;UBERON:0002371,7.43e-09,16;UBERON:0000065,7.99e-09,41;UBERON:0002204,1.20e-08,32;UBERON:0002384,2.61e-08,46;UBERON:0001041,3.59e-08,80|phase1_expression=0,0.348975407639361,0,0,0,0,0,59.7840987534498,8.72890077340334,9.59664557920173,2.39705155515707,3.03134204182278,56.3250401473667,66.614346643276,6.66219523631325,4.04950534779652,0.699561878128147,17.0349569293448,16.3166175990829,18.2487550273153,1.27564935226605,10.1276770224903,6.00759515019551,1.43993180514066,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0,0,346.125658619423,153.141727526665,204.697783893755,355.291818770733,351.085379268641,307.32805346872,0.251793635951155,0.405507724878058,0.367093504323363,0,0,0.219686182734472,0,0.139986421625363,0,11.9125650300993,67.458679207055,61.1690714439284,0.514518872071894,0.85960031981627,3.6097046459421,0,0,0,1.0165335962074,0.889294796111139,17.0980946283466,14.8329954385046,26.2877642530057,5.39280198933128,1.15265491596466,0.103689612308478,0,0,0.856952953211411,0,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.37863096666592,0,0,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,1.08245520505607,0.253359865475099,0,2.16949371466214,12.1700805314171,2.3750742250372,0.346970653532272,0.608930956624282,1.15307748628029,1.20578112442098,0.940709657085638,0,1.48316980640624,1.59059292611903,43.3459170455438,3.23533699894818,11.0420759230197,7.27312879702833,0,0,0.209446706813455,2.29911349687732,7.0690923458493,10.7982491578813,13.3423738426718,0.299581278809645,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,0.916554274652847,14.0579876789405,2.27450482590307,0.631325567659422,0,0.459804208866946,0,0.753524089178575,0.340182495756639,0.12811372028485,0.0937017245597288,0,0,0,0,0.43839146485515,1.11218899690239,0.696504333044333,1.64625709126355,0.199034266818493,33.7062329910353,21.3598762905214,28.9846769383505,0.207125772535502,0.234526059981096,0,0.23674473558521,1.37734962223183,0.154267112887378,0,0.268273401399619,0.350296027101508,0.16455984991348,0.492502392237286,0.243206428637567,0.730999937126662,0.87820046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| ||
|EntrezGene=19200 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=P97814 | |||
|association_with_transcript=39bp_to_ENSMUST00000138646,ENSMUST00000147360,NM_011193,uc009psv.2_5end | |||
|description=CAGE_peak_1_at_Pstpip1_5end | |||
|id=chr9:55937822..55937867,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.41e-10!32;CL:0002032!9.41e-10!32;CL:0000037!9.41e-10!32;CL:0000566!9.41e-10!32;CL:0000837!9.41e-10!32;CL:0000738!8.83e-08!17;CL:0002087!8.83e-08!17;CL:0002031!2.77e-07!25;CL:0000838!5.61e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.08e-12,32;CL:0002032,4.08e-12,32;CL:0000037,4.08e-12,32;CL:0000837,4.08e-12,32;CL:0002031,2.76e-09,25;CL:0000738,5.15e-09,17;CL:0002087,5.15e-09,17;CL:0000838,2.47e-08,12;CL:0002320,2.61e-08,46;CL:0000134,2.61e-08,46;CL:0000084,9.06e-08,11;CL:0000827,9.06e-08,11;CL:0000542,2.50e-07,13;CL:0000051,2.50e-07,13;CL:0000791,6.80e-07,9;CL:0000789,6.80e-07,9;CL:0002420,6.80e-07,9;CL:0002419,6.80e-07,9;CL:0000790,6.80e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.24e-18!48;UBERON:0002390!1.32e-17!45;UBERON:0003061!1.32e-17!45;UBERON:0002405!4.83e-14!70;UBERON:0003081!1.64e-12!88;UBERON:0004177!1.27e-10!29;UBERON:0000926!6.27e-09!193;UBERON:0004120!6.27e-09!193;UBERON:0006603!6.27e-09!193;UBERON:0003408!3.33e-08!24;UBERON:0002204!3.80e-08!32;UBERON:0006562!5.50e-08!24;UBERON:0001557!5.50e-08!24;UBERON:0001042!5.50e-08!24;UBERON:0008814!5.50e-08!24;UBERON:0009145!5.50e-08!24;UBERON:0002370!6.36e-08!23;UBERON:0000974!6.36e-08!23;UBERON:0004807!6.36e-08!23;UBERON:0005058!6.36e-08!23;UBERON:0003351!6.36e-08!23;UBERON:0009113!6.36e-08!23;UBERON:0003295!6.36e-08!23;UBERON:0009722!6.36e-08!23;UBERON:0005562!6.36e-08!23;UBERON:0007690!6.36e-08!23;UBERON:0002371!7.15e-08!16;UBERON:0001474!1.71e-07!22;UBERON:0004765!1.71e-07!22;UBERON:0001434!1.71e-07!22;UBERON:0005057!1.73e-07!51;UBERON:0001004!2.06e-07!42;UBERON:0000065!3.82e-07!41;UBERON:0000072!9.96e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.52e-22,45;UBERON:0003061,2.52e-22,45;UBERON:0002193,3.29e-22,48;UBERON:0002405,3.29e-22,48;UBERON:0004177,4.17e-14,29;UBERON:0005057,4.17e-14,29;UBERON:0000077,5.30e-14,35;UBERON:0003081,8.69e-13,87;UBERON:0003408,5.07e-11,24;UBERON:0006562,9.89e-11,24;UBERON:0001557,9.89e-11,24;UBERON:0001042,9.89e-11,24;UBERON:0008814,9.89e-11,24;UBERON:0009145,9.89e-11,24;UBERON:0002370,1.13e-10,23;UBERON:0000974,1.13e-10,23;UBERON:0004807,1.13e-10,23;UBERON:0005058,1.13e-10,23;UBERON:0003351,1.13e-10,23;UBERON:0009113,1.13e-10,23;UBERON:0003295,1.13e-10,23;UBERON:0009722,1.13e-10,23;UBERON:0005562,1.13e-10,23;UBERON:0007690,1.13e-10,23;UBERON:0000926,2.39e-10,120;UBERON:0004120,2.39e-10,120;UBERON:0006603,2.39e-10,120;UBERON:0000072,3.25e-09,27;UBERON:0001474,3.27e-09,22;UBERON:0004765,3.27e-09,22;UBERON:0001434,3.27e-09,22;UBERON:0001004,3.66e-09,42;UBERON:0002371,7.43e-09,16;UBERON:0000065,7.99e-09,41;UBERON:0002204,1.20e-08,32;UBERON:0002384,2.61e-08,46;UBERON:0001041,3.59e-08,80 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,59.7840987534498,8.72890077340334,9.59664557920173,2.39705155515707,3.03134204182278,56.3250401473667,66.614346643276,6.66219523631325,4.04950534779652,0.699561878128147,17.0349569293448,16.3166175990829,18.2487550273153,1.27564935226605,10.1276770224903,6.00759515019551,1.43993180514066,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0,0,346.125658619423,153.141727526665,204.697783893755,355.291818770733,351.085379268641,307.32805346872,0.251793635951155,0.405507724878058,0.367093504323363,0,0,0.219686182734472,0,0.139986421625363,0,11.9125650300993,67.458679207055,61.1690714439284,0.514518872071894,0.85960031981627,3.6097046459421,0,0,0,1.0165335962074,0.889294796111139,17.0980946283466,14.8329954385046,26.2877642530057,5.39280198933128,1.15265491596466,0.103689612308478,0,0,0.856952953211411,0,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.37863096666592,0,0,0,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,1.08245520505607,0.253359865475099,0,2.16949371466214,12.1700805314171,2.3750742250372,0.346970653532272,0.608930956624282,1.15307748628029,1.20578112442098,0.940709657085638,0,1.48316980640624,1.59059292611903,43.3459170455438,3.23533699894818,11.0420759230197,7.27312879702833,0,0,0.209446706813455,2.29911349687732,7.0690923458493,10.7982491578813,13.3423738426718,0.299581278809645,0,0.125654352112864,0,0.255715457330331,0,0.162241263067758,0.916554274652847,14.0579876789405,2.27450482590307,0.631325567659422,0,0.459804208866946,0,0.753524089178575,0.340182495756639,0.12811372028485,0.0937017245597288,0,0,0,0,0.43839146485515,1.11218899690239,0.696504333044333,1.64625709126355,0.199034266818493,33.7062329910353,21.3598762905214,28.9846769383505,0.207125772535502,0.234526059981096,0,0.23674473558521,1.37734962223183,0.154267112887378,0,0.268273401399619,0.350296027101508,0.16455984991348,0.492502392237286,0.243206428637567,0.730999937126662,0.878200461164203,0.536825675041487,0.210289948564127,0.102904612379284,3.30418782983798,0.528901133327089,0.426576501070468,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0,0.754005626400808,1.39269530428806,1.36474860983384,0,0.432276099749388,0.597423819763102,0.189667900953082,0.228497025219458,0,0.610953983535943,0.387904974335251,0.140271639780637,0.126473074248515,0.442830443938806,0,0.370191491765402,0,1.50160595144485,0.982794975566015,2.47348323623339,3.24576194221605,7.95884627182976,11.4581633301639,9.20627639842594,6.97181475132652,4.66754402419738,4.31304619582064,7.07067800570156,2.18426371180192,0.252578877947112,0.358794827043824,0,8.31389355749721,0,0.325929952884052,0.509235257325564,1.40814148973101,1.17254380209271,0.476087281772027,3.12213836572478,2.83743259391144,1.55025282754142,0.637819074629948,3.27726629431476,4.31712454664739,2.16973587872267,21.1107797514981,33.72215239676,1.96705709207614,2.20749397043786,0.321101179975584,0.468846746368813,0.327869890753351,1.51482556322624,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0.567760340833074,1.06839362200353,0.977321756121456,1.97964147567043,2.65490276679926,0.485561272309963,0,0,0.590603785761546,1.22974059177571,1.29214146584111,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0.340439605753788,0,0.517434735131018,0.214337035031592,0.709360934569094,0.178368817602071,0.493647061806363,0.913394847343798,8.44818149029357,12.0744280392378,0,0.32977250588296,0.645857706783622,1.08563264870681,1.07435109602823,1.96969079694074,1.7488850197791,0.927126510052548,16.4036045565939,11.9704383418669,18.7046472643409,8.66494902221579,10.935538217682,9.15112692826091,10.538662659619,12.7355821614529,10.9177979305495,0,0.474503990371703,0.813277868507395,0.540026704109006,0.209088296014469,0,0.944050424693745,1.23980183588004,0.785267825952089,0.648074866458964,3.72803587852155,0,0,0.496375471371293,0.583353565032143,0.645799117388655,0.675824501963113,1.5256441023948,0.2604087696879,0.104859344425711,0,0.288030006257865,42.0294790435477,3.85177909051312,8.31958753035101,10.133824192268,11.8157619140538,16.490552446845,21.9957672621543,25.2549091468527,25.0396795871406,27.9678980423849,33.2726410951574,39.8602732225587,36.3680761400445,38.218747013373,1.36038230169127,1.33191572024439,0,1.84673078000486,1.35232715822533,7.69498149349846,2.56412273974171,3.85863082342319,1.00314420807073,0,0,0,0,0,0,0,0.45032120322422,0,0,0.415149390336707,0,0.170733605754134,2.43106717068294,1.25767897576789,1.47074806760011,2.00022055021454,1.03017528619447,2.56735367673452,0.758091635291392,1.52087579934144,1.13175804831646,0.655490552289177,1.08842759088278,1.32101578597911,1.42888107384922,0.927074607558844,0.77163688185482,0.824171801606613,0.883193520806384,0.685738504770831,1.24233064311536,1.66905332963125,1.16277133305863,0.846984423737976,0.846146078916765,0.914639864363863,1.31534855718921,1.22223702461276,0.56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| |||
|short_description=p1@Pstpip1 | |||
}} |
Revision as of 18:16, 14 September 2013
Short description: | p1@Pstpip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pstpip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 39bp_to_ENSMUST00000138646, ENSMUST00000147360, NM_011193, uc009psv.2_5end |
EntrezGene: | Pstpip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.08e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.08e-12 | 32 |
hematopoietic stem cell | 4.08e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.08e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 2.76e-09 | 25 |
leukocyte | 5.15e-09 | 17 |
nongranular leukocyte | 5.15e-09 | 17 |
lymphoid lineage restricted progenitor cell | 2.47e-08 | 12 |
connective tissue cell | 2.61e-08 | 46 |
mesenchymal cell | 2.61e-08 | 46 |
T cell | 9.06e-08 | 11 |
pro-T cell | 9.06e-08 | 11 |
lymphocyte | 2.50e-07 | 13 |
common lymphoid progenitor | 2.50e-07 | 13 |
mature alpha-beta T cell | 6.80e-07 | 9 |
alpha-beta T cell | 6.80e-07 | 9 |
immature T cell | 6.80e-07 | 9 |
mature T cell | 6.80e-07 | 9 |
immature alpha-beta T cell | 6.80e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.