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FFCP PHASE1:Mm9::chr1:158233716..158233747,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=214575|HGNC=|MCL_coexpression_id=4|UniProt=|association_with_transcript=0bp_to_ENSMUST00000119202,ENSMUST00000141760,uc009uzx.2_5end|description=CAGE_peak_1_at_Tdrd5_5end|id=chr1:158233716..158233747,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,1.62e-07,3;CL:0000351,1.62e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!8.27e-14!57;UBERON:0000991!1.65e-10!18;UBERON:0005564!1.65e-10!18;UBERON:0001004!2.52e-10!42;UBERON:0004176!7.57e-10!17;UBERON:0009196!7.57e-10!17;UBERON:0009117!7.57e-10!17;UBERON:0003133!1.00e-09!24;UBERON:0000065!1.09e-09!41;UBERON:0005156!2.46e-09!26;UBERON:0000990!2.46e-09!26;UBERON:0002553!3.93e-09!39;UBERON:0003886!1.62e-08!38;UBERON:0003101!1.92e-08!16;UBERON:0000079!1.92e-08!16;UBERON:0003135!3.45e-08!15;UBERON:0002323!4.61e-08!37;UBERON:0004458!4.61e-08!37;UBERON:0000473!1.12e-07!14;UBERON:0000466!3.38e-07!79;UBERON:0000072!7.73e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0000991,4.01e-16,18;UBERON:0005564,4.01e-16,18;UBERON:0003408,1.52e-15,24;UBERON:0004176,1.44e-14,17;UBERON:0009196,1.44e-14,17;UBERON:0009117,1.44e-14,17;UBERON:0002370,6.14e-14,23;UBERON:0000974,6.14e-14,23;UBERON:0004807,6.14e-14,23;UBERON:0005058,6.14e-14,23;UBERON:0003351,6.14e-14,23;UBERON:0009113,6.14e-14,23;UBERON:0003295,6.14e-14,23;UBERON:0009722,6.14e-14,23;UBERON:0005562,6.14e-14,23;UBERON:0007690,6.14e-14,23;UBERON:0003133,1.98e-13,24;UBERON:0006562,3.07e-13,24;UBERON:0001557,3.07e-13,24;UBERON:0001042,3.07e-13,24;UBERON:0008814,3.07e-13,24;UBERON:0009145,3.07e-13,24;UBERON:0005156,3.54e-12,26;UBERON:0000990,3.54e-12,26;UBERON:0000473,5.39e-12,14;UBERON:0000072,1.86e-11,27;UBERON:0003135,4.39e-11,15;UBERON:0004177,1.78e-10,29;UBERON:0005057,1.78e-10,29;UBERON:0003101,2.75e-10,16;UBERON:0000079,2.75e-10,16;UBERON:0000077,1.37e-09,35;UBERON:0007811,2.43e-09,36;UBERON:0002113,5.77e-09,14;UBERON:0003918,5.77e-09,14;UBERON:0011143,5.77e-09,14;UBERON:0005095,5.77e-09,14;UBERON:0007687,5.77e-09,14;UBERON:0001004,8.03e-09,42;UBERON:0002553,1.76e-08,39;UBERON:0006554,2.15e-08,18;UBERON:0001008,7.18e-08,19;UBERON:0000065,8.82e-08,41;UBERON:0002323,1.04e-07,37;UBERON:0004458,1.04e-07,37;UBERON:0000358,1.62e-07,3;UBERON:0000307,1.62e-07,3;UBERON:0007010,1.62e-07,3;UBERON:0003886,1.95e-07,38;UBERON:0000153,2.43e-07,43;UBERON:0000926,4.78e-07,120;UBERON:0004120,4.78e-07,120;UBERON:0006603,4.78e-07,120|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521472960576829,0,0.20778804455956,0,0.203678727700633,0,0.505445516867349,0,0.260240885925407,0.459804208866946,0,0,0.204109497453984,0,0,0,0,0,0,0,0,0,0.205782136407943,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.292399974850665,0,0,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0,0,0.685491075658373,1.1270773567308,1.4255592949172,1.74557238450863,2.94570443539338,1.70738650235495,1.77132177575523,2.511979645462,2.83813477020141,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.339490171550376,0,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,1.59454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,1.95872164033981,3.4206261464251,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0.709360934569094,0.178368817602071,0,0,1.40803024838226,0.42366414172764,0.220528398054962,0.16488625294148,0,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0,2.4853572523477,1.69107881605257,1.94371509857172,6.28742263736971,2.91676782516071,1.54991788173277,0.506868376472335,0.704143431874524,3.25510962109875,3.35549902162275,1.93267296660805,2.30424005006292,23.068811805857,0,0.205421914329655,1.42912905275575,3.04345382634718,10.3314304486258,7.3319224207181,9.15675068482379,15.1449674922221,12.878950324695,16.2330158070313,21.7331074049648,21.6476643690741,38.218747013373,0.226730383615211,1.33191572024439,3.58855426437903,2.85403847818933,0,0,0,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0,0.701794825336225,0.214871054048298,0,0,0|short_description=p1@Tdrd5}}
|EntrezGene=214575
|HGNC=
|MCL_coexpression_id=4
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000119202,ENSMUST00000141760,uc009uzx.2_5end
|description=CAGE_peak_1_at_Tdrd5_5end
|id=chr1:158233716..158233747,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000349,1.62e-07,3;CL:0000351,1.62e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000464!8.27e-14!57;UBERON:0000991!1.65e-10!18;UBERON:0005564!1.65e-10!18;UBERON:0001004!2.52e-10!42;UBERON:0004176!7.57e-10!17;UBERON:0009196!7.57e-10!17;UBERON:0009117!7.57e-10!17;UBERON:0003133!1.00e-09!24;UBERON:0000065!1.09e-09!41;UBERON:0005156!2.46e-09!26;UBERON:0000990!2.46e-09!26;UBERON:0002553!3.93e-09!39;UBERON:0003886!1.62e-08!38;UBERON:0003101!1.92e-08!16;UBERON:0000079!1.92e-08!16;UBERON:0003135!3.45e-08!15;UBERON:0002323!4.61e-08!37;UBERON:0004458!4.61e-08!37;UBERON:0000473!1.12e-07!14;UBERON:0000466!3.38e-07!79;UBERON:0000072!7.73e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0000991,4.01e-16,18;UBERON:0005564,4.01e-16,18;UBERON:0003408,1.52e-15,24;UBERON:0004176,1.44e-14,17;UBERON:0009196,1.44e-14,17;UBERON:0009117,1.44e-14,17;UBERON:0002370,6.14e-14,23;UBERON:0000974,6.14e-14,23;UBERON:0004807,6.14e-14,23;UBERON:0005058,6.14e-14,23;UBERON:0003351,6.14e-14,23;UBERON:0009113,6.14e-14,23;UBERON:0003295,6.14e-14,23;UBERON:0009722,6.14e-14,23;UBERON:0005562,6.14e-14,23;UBERON:0007690,6.14e-14,23;UBERON:0003133,1.98e-13,24;UBERON:0006562,3.07e-13,24;UBERON:0001557,3.07e-13,24;UBERON:0001042,3.07e-13,24;UBERON:0008814,3.07e-13,24;UBERON:0009145,3.07e-13,24;UBERON:0005156,3.54e-12,26;UBERON:0000990,3.54e-12,26;UBERON:0000473,5.39e-12,14;UBERON:0000072,1.86e-11,27;UBERON:0003135,4.39e-11,15;UBERON:0004177,1.78e-10,29;UBERON:0005057,1.78e-10,29;UBERON:0003101,2.75e-10,16;UBERON:0000079,2.75e-10,16;UBERON:0000077,1.37e-09,35;UBERON:0007811,2.43e-09,36;UBERON:0002113,5.77e-09,14;UBERON:0003918,5.77e-09,14;UBERON:0011143,5.77e-09,14;UBERON:0005095,5.77e-09,14;UBERON:0007687,5.77e-09,14;UBERON:0001004,8.03e-09,42;UBERON:0002553,1.76e-08,39;UBERON:0006554,2.15e-08,18;UBERON:0001008,7.18e-08,19;UBERON:0000065,8.82e-08,41;UBERON:0002323,1.04e-07,37;UBERON:0004458,1.04e-07,37;UBERON:0000358,1.62e-07,3;UBERON:0000307,1.62e-07,3;UBERON:0007010,1.62e-07,3;UBERON:0003886,1.95e-07,38;UBERON:0000153,2.43e-07,43;UBERON:0000926,4.78e-07,120;UBERON:0004120,4.78e-07,120;UBERON:0006603,4.78e-07,120
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521472960576829,0,0.20778804455956,0,0.203678727700633,0,0.505445516867349,0,0.260240885925407,0.459804208866946,0,0,0.204109497453984,0,0,0,0,0,0,0,0,0,0.205782136407943,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.292399974850665,0,0,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0,0,0.685491075658373,1.1270773567308,1.4255592949172,1.74557238450863,2.94570443539338,1.70738650235495,1.77132177575523,2.511979645462,2.83813477020141,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0.339490171550376,0,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,1.59454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,1.95872164033981,3.4206261464251,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0,1.09060118843252,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0.709360934569094,0.178368817602071,0,0,1.40803024838226,0.42366414172764,0.220528398054962,0.16488625294148,0,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0,2.4853572523477,1.69107881605257,1.94371509857172,6.28742263736971,2.91676782516071,1.54991788173277,0.506868376472335,0.704143431874524,3.25510962109875,3.35549902162275,1.93267296660805,2.30424005006292,23.068811805857,0,0.205421914329655,1.42912905275575,3.04345382634718,10.3314304486258,7.3319224207181,9.15675068482379,15.1449674922221,12.878950324695,16.2330158070313,21.7331074049648,21.6476643690741,38.218747013373,0.226730383615211,1.33191572024439,3.58855426437903,2.85403847818933,0,0,0,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0,0.701794825336225,0.214871054048298,0,0,0
|short_description=p1@Tdrd5
}}

Revision as of 19:20, 13 September 2013

Short description:p1@Tdrd5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tdrd5_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: 0bp_to_ENSMUST00000119202, ENSMUST00000141760, uc009uzx.2_5end
EntrezGene:Tdrd5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tdrd5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.95
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C56.29
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B523.07
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G410.33
thymus, neonate N02.CNhs11181.1541-43F87.33
thymus, neonate N03.CNhs11137.2104-43C79.16
thymus, neonate N06.CNhs11197.681-26C415.14
thymus, neonate N07.CNhs11211.713-19D312.88
thymus, neonate N10.CNhs11194.748-24E416.23
thymus, neonate N20.CNhs11186.820-7A221.73
thymus, neonate N25.CNhs11125.1362-25G721.65
thymus, neonate N30.CNhs11132.1393-42G238.22
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
extraembryonic cell1.62e-073
trophoblast cell1.62e-073

Uber anatomy
Ontology termp-valuen
gonad4.01e-1618
gonad primordium4.01e-1618
gland of gut1.52e-1524
external genitalia1.44e-1417
indifferent external genitalia1.44e-1417
indifferent gonad1.44e-1417
thymus6.14e-1423
neck6.14e-1423
respiratory system epithelium6.14e-1423
hemolymphoid system gland6.14e-1423
pharyngeal epithelium6.14e-1423
thymic region6.14e-1423
pharyngeal gland6.14e-1423
entire pharyngeal arch endoderm6.14e-1423
thymus primordium6.14e-1423
early pharyngeal endoderm6.14e-1423
reproductive organ1.98e-1324
pharynx3.07e-1324
upper respiratory tract3.07e-1324
chordate pharynx3.07e-1324
pharyngeal arch system3.07e-1324
pharyngeal region of foregut3.07e-1324
reproductive structure3.54e-1226
reproductive system3.54e-1226
testis5.39e-1214
segment of respiratory tract1.86e-1127
male reproductive organ4.39e-1115
hemopoietic organ1.78e-1029
immune organ1.78e-1029
male organism2.75e-1016
male reproductive system2.75e-1016
mixed endoderm/mesoderm-derived structure1.37e-0935
craniocervical region2.43e-0936
kidney5.77e-0914
kidney mesenchyme5.77e-0914
upper urinary tract5.77e-0914
kidney rudiment5.77e-0914
kidney field5.77e-0914
respiratory system8.03e-0942
anatomical cavity1.76e-0839
urinary system structure2.15e-0818
renal system7.18e-0819
respiratory tract8.82e-0841
body cavity1.04e-0737
body cavity or lining1.04e-0737
blastocyst1.62e-073
blastula1.62e-073
cleaving embryo1.62e-073
body cavity precursor1.95e-0738
anterior region of body2.43e-0743
mesoderm4.78e-07120
mesoderm-derived structure4.78e-07120
presumptive mesoderm4.78e-07120







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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