FFCP PHASE1:Mm9::chr15:83278346..83278372,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=93|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:83278346..83278372,-|id=chr15:83278346..83278372,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!1.67e-11!10;UBERON:0000411!1.67e-11!10;UBERON:0001950!1.67e-11!10;UBERON:0002619!1.18e-08!17;UBERON:0000956!8.69e-08!21;UBERON:0001869!8.69e-08!21;UBERON:0000203!8.69e-08!21;UBERON:0000914!2.19e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.19e-37,10;UBERON:0000411,1.19e-37,10;UBERON:0001950,1.19e-37,10;UBERON:0002619,1.01e-26,17;UBERON:0000956,7.96e-26,21;UBERON:0001869,7.96e-26,21;UBERON:0000203,7.96e-26,21;UBERON:0003528,2.94e-18,29;UBERON:0002791,2.94e-18,29;UBERON:0001893,2.94e-18,29;UBERON:0002020,2.49e-15,34;UBERON:0002780,3.76e-13,39;UBERON:0001890,3.76e-13,39;UBERON:0006240,3.76e-13,39;UBERON:0000955,7.25e-13,47;UBERON:0006238,7.25e-13,47;UBERON:0003080,8.83e-13,40;UBERON:0002616,6.82e-11,46;UBERON:0003056,4.02e-10,49;UBERON:0001049,1.94e-09,52;UBERON:0005068,1.94e-09,52;UBERON:0006241,1.94e-09,52;UBERON:0007135,1.94e-09,52;UBERON:0000073,5.01e-09,54;UBERON:0001017,5.16e-09,73;UBERON:0001016,1.02e-08,75;UBERON:0000025,3.39e-08,114;UBERON:0004111,1.73e-07,122;UBERON:0002346,2.39e-07,64;UBERON:0003075,2.39e-07,64;UBERON:0007284,2.39e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788655413395594,0,0.42438965179803,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0.439372365468944,0,0.139986421625363,1.43752564364972,0.167782606057736,0,0,2.05807548828758,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,2.719885334831,2.69851595818909,0.649776417447669,0.896053774194671,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0.247194967734374,0,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0.449371918214468,0,0,1.73824320192276,1.02286182932132,0,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,1.89260953707715,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0.72353147925725,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0,0,1.01031551178845,0.896987067609561,0.964887042726734,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,20.8858855674175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0,0,0,2.82375921308533,3.22227665555024,1.71868654031819,2.57779773515531,3.42541259885321,1.5107877947794,0,1.80128481289688,2.71885445390523,3.62432218226274,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0.394017929502254,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p@chr15:83278346..83278372,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=93 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:83278346..83278372,- | |||
|id=chr15:83278346..83278372,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.67e-11!10;UBERON:0000411!1.67e-11!10;UBERON:0001950!1.67e-11!10;UBERON:0002619!1.18e-08!17;UBERON:0000956!8.69e-08!21;UBERON:0001869!8.69e-08!21;UBERON:0000203!8.69e-08!21;UBERON:0000914!2.19e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.19e-37,10;UBERON:0000411,1.19e-37,10;UBERON:0001950,1.19e-37,10;UBERON:0002619,1.01e-26,17;UBERON:0000956,7.96e-26,21;UBERON:0001869,7.96e-26,21;UBERON:0000203,7.96e-26,21;UBERON:0003528,2.94e-18,29;UBERON:0002791,2.94e-18,29;UBERON:0001893,2.94e-18,29;UBERON:0002020,2.49e-15,34;UBERON:0002780,3.76e-13,39;UBERON:0001890,3.76e-13,39;UBERON:0006240,3.76e-13,39;UBERON:0000955,7.25e-13,47;UBERON:0006238,7.25e-13,47;UBERON:0003080,8.83e-13,40;UBERON:0002616,6.82e-11,46;UBERON:0003056,4.02e-10,49;UBERON:0001049,1.94e-09,52;UBERON:0005068,1.94e-09,52;UBERON:0006241,1.94e-09,52;UBERON:0007135,1.94e-09,52;UBERON:0000073,5.01e-09,54;UBERON:0001017,5.16e-09,73;UBERON:0001016,1.02e-08,75;UBERON:0000025,3.39e-08,114;UBERON:0004111,1.73e-07,122;UBERON:0002346,2.39e-07,64;UBERON:0003075,2.39e-07,64;UBERON:0007284,2.39e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788655413395594,0,0.42438965179803,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0.439372365468944,0,0.139986421625363,1.43752564364972,0.167782606057736,0,0,2.05807548828758,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,2.719885334831,2.69851595818909,0.649776417447669,0.896053774194671,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0.247194967734374,0,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0.449371918214468,0,0,1.73824320192276,1.02286182932132,0,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,1.89260953707715,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0.72353147925725,0.25462585178142,0.287696137450811,0,0,1.43768206527355,0,0,1.01031551178845,0.896987067609561,0.964887042726734,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,20.8858855674175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0,0,0,2.82375921308533,3.22227665555024,1.71868654031819,2.57779773515531,3.42541259885321,1.5107877947794,0,1.80128481289688,2.71885445390523,3.62432218226274,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0.394017929502254,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr15:83278346..83278372,- | |||
}} |
Revision as of 11:23, 13 September 2013
Short description: | p@chr15:83278346..83278372, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:83278346..83278372, - |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.19e-37 | 10 |
visual cortex | 1.19e-37 | 10 |
neocortex | 1.19e-37 | 10 |
regional part of cerebral cortex | 1.01e-26 | 17 |
cerebral cortex | 7.96e-26 | 21 |
cerebral hemisphere | 7.96e-26 | 21 |
pallium | 7.96e-26 | 21 |
brain grey matter | 2.94e-18 | 29 |
regional part of telencephalon | 2.94e-18 | 29 |
telencephalon | 2.94e-18 | 29 |
gray matter | 2.49e-15 | 34 |
regional part of forebrain | 3.76e-13 | 39 |
forebrain | 3.76e-13 | 39 |
future forebrain | 3.76e-13 | 39 |
brain | 7.25e-13 | 47 |
future brain | 7.25e-13 | 47 |
anterior neural tube | 8.83e-13 | 40 |
regional part of brain | 6.82e-11 | 46 |
pre-chordal neural plate | 4.02e-10 | 49 |
neural tube | 1.94e-09 | 52 |
neural rod | 1.94e-09 | 52 |
future spinal cord | 1.94e-09 | 52 |
neural keel | 1.94e-09 | 52 |
regional part of nervous system | 5.01e-09 | 54 |
central nervous system | 5.16e-09 | 73 |
nervous system | 1.02e-08 | 75 |
tube | 3.39e-08 | 114 |
anatomical conduit | 1.73e-07 | 122 |
neurectoderm | 2.39e-07 | 64 |
neural plate | 2.39e-07 | 64 |
presumptive neural plate | 2.39e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.