FFCP PHASE1:Mm9::chr12:75397679..75397684,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2042|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:75397679..75397684,+|id=chr12:75397679..75397684,+|ontology_enrichment_celltype=CL:0000117!1.43e-08!23;CL:0000337!1.43e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.50e-10,23;CL:0000337,1.50e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.18e-22!71;UBERON:0003075!5.18e-22!71;UBERON:0007284!5.18e-22!71;UBERON:0001049!5.55e-21!52;UBERON:0005068!5.55e-21!52;UBERON:0006241!5.55e-21!52;UBERON:0007135!5.55e-21!52;UBERON:0000955!1.50e-20!50;UBERON:0006238!1.50e-20!50;UBERON:0002616!6.92e-20!49;UBERON:0003080!3.47e-19!40;UBERON:0002780!1.13e-18!39;UBERON:0001890!1.13e-18!39;UBERON:0006240!1.13e-18!39;UBERON:0003056!3.14e-17!49;UBERON:0000073!5.96e-17!75;UBERON:0001016!5.96e-17!75;UBERON:0001017!8.38e-17!73;UBERON:0005743!8.38e-17!73;UBERON:0000033!1.47e-16!63;UBERON:0004121!6.99e-16!102;UBERON:0000924!6.99e-16!102;UBERON:0006601!6.99e-16!102;UBERON:0002020!1.39e-15!34;UBERON:0002791!1.50e-13!29;UBERON:0003528!1.50e-13!29;UBERON:0001893!1.50e-13!29;UBERON:0000956!5.78e-10!21;UBERON:0001869!5.78e-10!21;UBERON:0000203!5.78e-10!21;UBERON:0002021!1.24e-08!10;UBERON:0000411!1.24e-08!10;UBERON:0001950!1.24e-08!10;UBERON:0002619!3.12e-08!17;UBERON:0007811!1.57e-07!86;UBERON:0001264!2.89e-07!12;UBERON:0003922!2.89e-07!12;UBERON:0002114!2.89e-07!12;UBERON:0003923!2.89e-07!12;UBERON:0003924!2.89e-07!12;UBERON:0003921!2.89e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.23e-29,54;UBERON:0001049,5.85e-28,52;UBERON:0005068,5.85e-28,52;UBERON:0006241,5.85e-28,52;UBERON:0007135,5.85e-28,52;UBERON:0003080,6.70e-25,40;UBERON:0000955,7.17e-25,47;UBERON:0006238,7.17e-25,47;UBERON:0002780,3.82e-24,39;UBERON:0001890,3.82e-24,39;UBERON:0006240,3.82e-24,39;UBERON:0002616,6.34e-24,46;UBERON:0001017,2.84e-22,73;UBERON:0002346,7.37e-22,64;UBERON:0003075,7.37e-22,64;UBERON:0007284,7.37e-22,64;UBERON:0001016,3.14e-21,75;UBERON:0002020,3.50e-21,34;UBERON:0003056,3.80e-20,49;UBERON:0003528,3.73e-18,29;UBERON:0002791,3.73e-18,29;UBERON:0001893,3.73e-18,29;UBERON:0010371,2.87e-17,73;UBERON:0010314,4.08e-16,92;UBERON:0004121,9.20e-15,95;UBERON:0000924,9.20e-15,95;UBERON:0006601,9.20e-15,95;UBERON:0000956,8.32e-14,21;UBERON:0001869,8.32e-14,21;UBERON:0000203,8.32e-14,21;UBERON:0002021,4.12e-12,10;UBERON:0000411,4.12e-12,10;UBERON:0001950,4.12e-12,10;UBERON:0002619,3.14e-11,17;UBERON:0001264,4.47e-10,12;UBERON:0000025,6.91e-07,114;UBERON:0001894,7.19e-07,10;UBERON:0006222,7.19e-07,10|phase1_expression=0,0,0,0,0,0.503637815735669,1.40167584357315,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0.384218305321555,1.76272340924412,1.62007125998029,2.3135745748652,1.42825492201902,3.75476519617743,2.81728838194394,1.53352753629178,0.919218786610021,3.30347642998166,6.12899222808901,5.52983519722476,1.18697658957174,0.640413505216868,4.68822033501084,1.95428099300967,7.87867654044352,9.16789486660861,2.35702868378934,3.41692033917847,1.86399445825301,0.227178579999552,0.906858721281426,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,1.02765491747154,0,5.04703272820404,3.64319186208885,0.608930956624282,5.30415643688935,7.68685466818375,8.46638691377075,4.39833069653864,0.988779870937496,0,0,0,0,0.484875253135222,0,0.292780797011547,1.04723353406728,0.510914110417183,0,0,0,4.04434726393021,21.9600289352941,25.8847965352501,35.9816342798012,31.1972857943003,10.8049783170971,20.2801578834697,0.509196819251581,1.7416975885413,6.82351447770922,0,0.130120442962704,0.229902104433473,0.360124259610698,0,1.49680298132921,0.896796041993948,1.03071897015702,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,18.2952255250791,5.65975368086064,0,0,0,0.232236671860439,0.515469845288373,1.00841762311671,1.11189021922435,0.760902504450237,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.597423819763102,0,0.342745537829186,0,0,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0,0,1.60550589987792,4.10240903072711,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,11.5675673911851,1.41940085208269,1.06839362200353,1.95464351224291,2.14461159864296,1.32745138339963,8.49732226542435,17.2324427469908,15.2770114602277,2.65771703592696,10.7602301780375,7.23599220871019,19.6308213917853,11.4079161083111,5.37262488490887,1.05418608574999,2.06271086496374,117.111224379303,0.540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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2042 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:75397679..75397684,+ | |||
|id=chr12:75397679..75397684,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.43e-08!23;CL:0000337!1.43e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.50e-10,23;CL:0000337,1.50e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.18e-22!71;UBERON:0003075!5.18e-22!71;UBERON:0007284!5.18e-22!71;UBERON:0001049!5.55e-21!52;UBERON:0005068!5.55e-21!52;UBERON:0006241!5.55e-21!52;UBERON:0007135!5.55e-21!52;UBERON:0000955!1.50e-20!50;UBERON:0006238!1.50e-20!50;UBERON:0002616!6.92e-20!49;UBERON:0003080!3.47e-19!40;UBERON:0002780!1.13e-18!39;UBERON:0001890!1.13e-18!39;UBERON:0006240!1.13e-18!39;UBERON:0003056!3.14e-17!49;UBERON:0000073!5.96e-17!75;UBERON:0001016!5.96e-17!75;UBERON:0001017!8.38e-17!73;UBERON:0005743!8.38e-17!73;UBERON:0000033!1.47e-16!63;UBERON:0004121!6.99e-16!102;UBERON:0000924!6.99e-16!102;UBERON:0006601!6.99e-16!102;UBERON:0002020!1.39e-15!34;UBERON:0002791!1.50e-13!29;UBERON:0003528!1.50e-13!29;UBERON:0001893!1.50e-13!29;UBERON:0000956!5.78e-10!21;UBERON:0001869!5.78e-10!21;UBERON:0000203!5.78e-10!21;UBERON:0002021!1.24e-08!10;UBERON:0000411!1.24e-08!10;UBERON:0001950!1.24e-08!10;UBERON:0002619!3.12e-08!17;UBERON:0007811!1.57e-07!86;UBERON:0001264!2.89e-07!12;UBERON:0003922!2.89e-07!12;UBERON:0002114!2.89e-07!12;UBERON:0003923!2.89e-07!12;UBERON:0003924!2.89e-07!12;UBERON:0003921!2.89e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.23e-29,54;UBERON:0001049,5.85e-28,52;UBERON:0005068,5.85e-28,52;UBERON:0006241,5.85e-28,52;UBERON:0007135,5.85e-28,52;UBERON:0003080,6.70e-25,40;UBERON:0000955,7.17e-25,47;UBERON:0006238,7.17e-25,47;UBERON:0002780,3.82e-24,39;UBERON:0001890,3.82e-24,39;UBERON:0006240,3.82e-24,39;UBERON:0002616,6.34e-24,46;UBERON:0001017,2.84e-22,73;UBERON:0002346,7.37e-22,64;UBERON:0003075,7.37e-22,64;UBERON:0007284,7.37e-22,64;UBERON:0001016,3.14e-21,75;UBERON:0002020,3.50e-21,34;UBERON:0003056,3.80e-20,49;UBERON:0003528,3.73e-18,29;UBERON:0002791,3.73e-18,29;UBERON:0001893,3.73e-18,29;UBERON:0010371,2.87e-17,73;UBERON:0010314,4.08e-16,92;UBERON:0004121,9.20e-15,95;UBERON:0000924,9.20e-15,95;UBERON:0006601,9.20e-15,95;UBERON:0000956,8.32e-14,21;UBERON:0001869,8.32e-14,21;UBERON:0000203,8.32e-14,21;UBERON:0002021,4.12e-12,10;UBERON:0000411,4.12e-12,10;UBERON:0001950,4.12e-12,10;UBERON:0002619,3.14e-11,17;UBERON:0001264,4.47e-10,12;UBERON:0000025,6.91e-07,114;UBERON:0001894,7.19e-07,10;UBERON:0006222,7.19e-07,10 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,1.40167584357315,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0.319984845586813,0.68822784320151,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0.384218305321555,1.76272340924412,1.62007125998029,2.3135745748652,1.42825492201902,3.75476519617743,2.81728838194394,1.53352753629178,0.919218786610021,3.30347642998166,6.12899222808901,5.52983519722476,1.18697658957174,0.640413505216868,4.68822033501084,1.95428099300967,7.87867654044352,9.16789486660861,2.35702868378934,3.41692033917847,1.86399445825301,0.227178579999552,0.906858721281426,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,1.02765491747154,0,5.04703272820404,3.64319186208885,0.608930956624282,5.30415643688935,7.68685466818375,8.46638691377075,4.39833069653864,0.988779870937496,0,0,0,0,0.484875253135222,0,0.292780797011547,1.04723353406728,0.510914110417183,0,0,0,4.04434726393021,21.9600289352941,25.8847965352501,35.9816342798012,31.1972857943003,10.8049783170971,20.2801578834697,0.509196819251581,1.7416975885413,6.82351447770922,0,0.130120442962704,0.229902104433473,0.360124259610698,0,1.49680298132921,0.896796041993948,1.03071897015702,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,18.2952255250791,5.65975368086064,0,0,0,0.232236671860439,0.515469845288373,1.00841762311671,1.11189021922435,0.760902504450237,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.597423819763102,0,0.342745537829186,0,0,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0,0,1.60550589987792,4.10240903072711,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0.292255857911312,0,11.5675673911851,1.41940085208269,1.06839362200353,1.95464351224291,2.14461159864296,1.32745138339963,8.49732226542435,17.2324427469908,15.2770114602277,2.65771703592696,10.7602301780375,7.23599220871019,19.6308213917853,11.4079161083111,5.37262488490887,1.05418608574999,2.06271086496374,117.111224379303,0.540183282093931,0.258717367565509,3.21505552547388,41.1429342050075,39.2411398724555,44.5927845831748,8.52501857520878,2.11204537257339,1.48282449604674,0,0,0.161464426695906,0.180938774784468,0,0,0,4.45020724825223,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,2.86401185404534,0.158167996790568,1.82987520414164,0.540026704109006,0.836353184057875,0.655087691238533,0.809186078308924,0.495920734352016,2.09404753587224,0.129614973291793,0,4.50954350947352,0,0,0,0.258319646955462,0,0,0.2604087696879,0,3.8653459332161,2.01621004380506,0,0,0,0,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0.167884616364078,0,0,0.915758121336325,0.857473516316263,0,48.5686584650677,41.8895965221531,53.8521782633033,74.240574772473,32.8839609489908,27.1941803060292,33.0761025113585,27.4695933966774,30.8136838109259,28.4768171463501,0.103787347584177,0.399024873401031,0.170733605754134,1.21553358534147,0.838452650511929,1.10306105070008,0.666740183404846,0.618105171716683,0.64183841918363,0.758091635291392,0.25347929989024,0.943131706930381,1.12369808963859,0.576226371643824,1.03383844120104,0.952587382566147,1.50649623728312,0.77163688185482,0.824171801606613,1.03039244094078,0.685738504770831,1.06485483695602,0.476872379894642,1.0174249164263,0.658765662907314,1.52306294205018,0.914639864363863,2.63069711437843,0.814824683075171,0.561142271657738,0.593175090620871,0.689531376628944,1.22769312950907,2.47898945897546,0.578719832943424,0.499621155875892,1.16965804222704,0.859484216193193,0.57386499620653,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr12:75397679..75397684,+ | |||
}} |
Revision as of 23:11, 12 September 2013
Short description: | p@chr12:75397679..75397684, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:75397679..75397684, + |
Coexpression cluster: | MCL_coexpression_mm9:2042 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.50e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.50e-10 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.