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FFCP PHASE1:Mm9::chr7:89079456..89079478,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=29877|HGNC=|MCL_coexpression_id=22|UniProt=Q9JMG7|association_with_transcript=-97bp_to_ENSMUST00000107305_5end|description=CAGE_peak_4_at_Hdgfrp3_5end|id=chr7:89079456..89079478,-|ontology_enrichment_celltype=CL:0000117!1.28e-11!23;CL:0000337!1.28e-11!23;CL:0000540!1.05e-10!33;CL:0000047!1.05e-10!33;CL:0000031!1.05e-10!33;CL:0000404!1.05e-10!33;CL:0000393!6.33e-09!39;CL:0000211!6.33e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-15,23;CL:0000337,4.61e-15,23;CL:0000540,1.02e-10,33;CL:0000047,1.02e-10,33;CL:0000031,1.02e-10,33;CL:0000404,1.02e-10,33;CL:0000393,4.97e-08,39;CL:0000211,4.97e-08,39;CL:0002609,7.08e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!9.51e-15!94;UBERON:0003056!2.62e-14!49;UBERON:0002020!2.86e-14!34;UBERON:0001049!4.84e-14!52;UBERON:0005068!4.84e-14!52;UBERON:0006241!4.84e-14!52;UBERON:0007135!4.84e-14!52;UBERON:0001017!8.16e-14!73;UBERON:0005743!8.16e-14!73;UBERON:0002346!9.52e-14!71;UBERON:0003075!9.52e-14!71;UBERON:0007284!9.52e-14!71;UBERON:0000073!3.43e-13!75;UBERON:0001016!3.43e-13!75;UBERON:0007811!1.16e-12!86;UBERON:0003080!1.48e-12!40;UBERON:0002780!2.77e-12!39;UBERON:0001890!2.77e-12!39;UBERON:0006240!2.77e-12!39;UBERON:0002791!5.42e-12!29;UBERON:0003528!5.42e-12!29;UBERON:0001893!5.42e-12!29;UBERON:0000033!6.19e-12!63;UBERON:0004121!7.39e-12!102;UBERON:0000924!7.39e-12!102;UBERON:0006601!7.39e-12!102;UBERON:0000955!9.44e-12!50;UBERON:0006238!9.44e-12!50;UBERON:0002616!2.25e-11!49;UBERON:0000956!4.84e-08!21;UBERON:0001869!4.84e-08!21;UBERON:0000203!4.84e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.58e-20,64;UBERON:0003075,1.58e-20,64;UBERON:0007284,1.58e-20,64;UBERON:0003056,4.65e-20,49;UBERON:0002020,5.20e-19,34;UBERON:0001049,4.57e-18,52;UBERON:0005068,4.57e-18,52;UBERON:0006241,4.57e-18,52;UBERON:0007135,4.57e-18,52;UBERON:0000073,5.33e-17,54;UBERON:0001017,1.12e-16,73;UBERON:0003528,1.89e-16,29;UBERON:0002791,1.89e-16,29;UBERON:0001893,1.89e-16,29;UBERON:0010371,3.00e-16,73;UBERON:0003080,5.00e-16,40;UBERON:0001016,7.38e-16,75;UBERON:0004121,9.69e-16,95;UBERON:0000924,9.69e-16,95;UBERON:0006601,9.69e-16,95;UBERON:0002780,1.38e-15,39;UBERON:0001890,1.38e-15,39;UBERON:0006240,1.38e-15,39;UBERON:0000955,2.24e-15,47;UBERON:0006238,2.24e-15,47;UBERON:0002616,8.84e-15,46;UBERON:0000956,3.35e-11,21;UBERON:0001869,3.35e-11,21;UBERON:0000203,3.35e-11,21;UBERON:0010314,8.25e-11,92;UBERON:0002619,1.73e-07,17;UBERON:0000369,4.16e-07,5;UBERON:0002435,4.16e-07,5;UBERON:0000204,4.16e-07,5;UBERON:0010082,4.16e-07,5|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0.516493293766305,0.281577444303333,0.234064526321993,0.34243593645101,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0,0,0,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0,5.05791152148994,4.23192783417626,8.23980824558033,0.338844532069132,0,0,0,0,0,0,4.25127410464758,4.72520784160917,4.83747411108179,0.856952953211411,1.10434270475807,4.40966877173835,3.54628242767475,2.75765635983006,0,2.042997409363,0.921639199537461,5.27545150920775,7.41049913179518,6.77187381723788,1.11673199600552,1.12552522006336,0.916789486660861,3.24091444021034,3.13217697758026,3.35519002485541,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,1.28326477414318,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,1.04853447583376,2.28750301409313,7.91622418311046,2.78118912307642,5.11430914660661,1.24672826735736,1.1356888414743,0.509196819251581,0.124406970610093,0,0,1.82168620147785,1.60931473103431,2.16074555766419,2.26057226753573,1.63287597963187,1.2811372028485,1.59292931751539,0,2.80238390812695,2.08016688184601,1.23165786914764,1.53437012699302,1.94633074457919,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.414251545071004,1.17263029990548,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,1.89260953707715,3.60166143327496,0,0,1.49301775374664,1.39342003116263,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0.913988100877831,1.1270773567308,0.407302655690628,0,0.631222379012867,0.0632365371242573,0.147610147979602,0,0,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,1.32643988239339,1.14075483509418,0.339490171550376,0.234690248288502,0.502518772325447,0.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|EntrezGene=29877
|HGNC=
|MCL_coexpression_id=22
|UniProt=Q9JMG7
|association_with_transcript=-97bp_to_ENSMUST00000107305_5end
|description=CAGE_peak_4_at_Hdgfrp3_5end
|id=chr7:89079456..89079478,-
|ontology_enrichment_celltype=CL:0000117!1.28e-11!23;CL:0000337!1.28e-11!23;CL:0000540!1.05e-10!33;CL:0000047!1.05e-10!33;CL:0000031!1.05e-10!33;CL:0000404!1.05e-10!33;CL:0000393!6.33e-09!39;CL:0000211!6.33e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-15,23;CL:0000337,4.61e-15,23;CL:0000540,1.02e-10,33;CL:0000047,1.02e-10,33;CL:0000031,1.02e-10,33;CL:0000404,1.02e-10,33;CL:0000393,4.97e-08,39;CL:0000211,4.97e-08,39;CL:0002609,7.08e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!9.51e-15!94;UBERON:0003056!2.62e-14!49;UBERON:0002020!2.86e-14!34;UBERON:0001049!4.84e-14!52;UBERON:0005068!4.84e-14!52;UBERON:0006241!4.84e-14!52;UBERON:0007135!4.84e-14!52;UBERON:0001017!8.16e-14!73;UBERON:0005743!8.16e-14!73;UBERON:0002346!9.52e-14!71;UBERON:0003075!9.52e-14!71;UBERON:0007284!9.52e-14!71;UBERON:0000073!3.43e-13!75;UBERON:0001016!3.43e-13!75;UBERON:0007811!1.16e-12!86;UBERON:0003080!1.48e-12!40;UBERON:0002780!2.77e-12!39;UBERON:0001890!2.77e-12!39;UBERON:0006240!2.77e-12!39;UBERON:0002791!5.42e-12!29;UBERON:0003528!5.42e-12!29;UBERON:0001893!5.42e-12!29;UBERON:0000033!6.19e-12!63;UBERON:0004121!7.39e-12!102;UBERON:0000924!7.39e-12!102;UBERON:0006601!7.39e-12!102;UBERON:0000955!9.44e-12!50;UBERON:0006238!9.44e-12!50;UBERON:0002616!2.25e-11!49;UBERON:0000956!4.84e-08!21;UBERON:0001869!4.84e-08!21;UBERON:0000203!4.84e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.58e-20,64;UBERON:0003075,1.58e-20,64;UBERON:0007284,1.58e-20,64;UBERON:0003056,4.65e-20,49;UBERON:0002020,5.20e-19,34;UBERON:0001049,4.57e-18,52;UBERON:0005068,4.57e-18,52;UBERON:0006241,4.57e-18,52;UBERON:0007135,4.57e-18,52;UBERON:0000073,5.33e-17,54;UBERON:0001017,1.12e-16,73;UBERON:0003528,1.89e-16,29;UBERON:0002791,1.89e-16,29;UBERON:0001893,1.89e-16,29;UBERON:0010371,3.00e-16,73;UBERON:0003080,5.00e-16,40;UBERON:0001016,7.38e-16,75;UBERON:0004121,9.69e-16,95;UBERON:0000924,9.69e-16,95;UBERON:0006601,9.69e-16,95;UBERON:0002780,1.38e-15,39;UBERON:0001890,1.38e-15,39;UBERON:0006240,1.38e-15,39;UBERON:0000955,2.24e-15,47;UBERON:0006238,2.24e-15,47;UBERON:0002616,8.84e-15,46;UBERON:0000956,3.35e-11,21;UBERON:0001869,3.35e-11,21;UBERON:0000203,3.35e-11,21;UBERON:0010314,8.25e-11,92;UBERON:0002619,1.73e-07,17;UBERON:0000369,4.16e-07,5;UBERON:0002435,4.16e-07,5;UBERON:0000204,4.16e-07,5;UBERON:0010082,4.16e-07,5
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0.516493293766305,0.281577444303333,0.234064526321993,0.34243593645101,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0,0,0,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0,5.05791152148994,4.23192783417626,8.23980824558033,0.338844532069132,0,0,0,0,0,0,4.25127410464758,4.72520784160917,4.83747411108179,0.856952953211411,1.10434270475807,4.40966877173835,3.54628242767475,2.75765635983006,0,2.042997409363,0.921639199537461,5.27545150920775,7.41049913179518,6.77187381723788,1.11673199600552,1.12552522006336,0.916789486660861,3.24091444021034,3.13217697758026,3.35519002485541,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,1.28326477414318,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,1.04853447583376,2.28750301409313,7.91622418311046,2.78118912307642,5.11430914660661,1.24672826735736,1.1356888414743,0.509196819251581,0.124406970610093,0,0,1.82168620147785,1.60931473103431,2.16074555766419,2.26057226753573,1.63287597963187,1.2811372028485,1.59292931751539,0,2.80238390812695,2.08016688184601,1.23165786914764,1.53437012699302,1.94633074457919,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.414251545071004,1.17263029990548,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,1.89260953707715,3.60166143327496,0,0,1.49301775374664,1.39342003116263,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,0.913988100877831,1.1270773567308,0.407302655690628,0,0.631222379012867,0.0632365371242573,0.147610147979602,0,0,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,1.32643988239339,1.14075483509418,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.289298117163023,0,0,0,0.275936746304732,1.44495530989013,1.05490517932983,1.14754461763673,0.252470927204373,0.631016438832513,0,0.430846795465598,1.19484398976276,0.222798674082394,0.283076530788832,0.809621403349789,0.876767573733936,2.37172666767914,1.28528526568723,0,0.35613120733451,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0,0,0,0,0,2.52085531643834,1.03486947026204,0.214337035031592,0.886701168211368,1.07021290561242,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.361877549568935,0.716234064018819,0.492422699235184,0,1.66882771809459,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0.276399947608848,0,1.10717597753397,0.609958401380546,0.324016022465404,0.209088296014469,0,0.404593039154462,0.165306911450672,0,0,0,0,0.598066184175915,0.330916980914195,0.388902376688095,0.645799117388655,0.506868376472335,0.352071715937262,1.3020438484395,0.838874755405687,0.241584120826006,0.288030006257865,1.26404448251271,1.01362607645082,0.410843828659309,0.909445760844565,1.43221356533985,0.79472541912506,1.56254084375959,0.738447635872886,0.807731599585181,0.685861259894999,1.31074040677893,0.487289403698762,0.673482891482306,0.350630706544707,0,0.221985953374065,0,0.167884616364078,0.386379188064381,0,0.183151624267265,0,0,5.0827665835536,1.84130094602871,1.71868654031819,1.3748254587495,2.05524755931193,0.755393897389701,0.675022500231806,2.70192721934532,1.35942722695261,0,2.59468368960442,3.59122386060928,2.73173769206615,1.21553358534147,1.25767897576789,1.2869045591501,1.11123363900808,1.03017528619447,0,0.758091635291392,1.01391719956096,1.32038438970253,1.03005658216871,1.02440243847791,1.03383844120104,0.476293691283074,1.50649623728312,1.73618298417335,1.23625770240992,0.588795680537589,1.02860775715625,0.177475806159338,1.1921809497366,1.0174249164263,1.03520318456864,0.846146078916765,1.28049581010941,1.8414879800649,1.22223702461276,0.561142271657738,1.30498519936592,0.985044823755635,0.409231043169689,0.929621047115796,0.578719832943424,2.99772693525535,0.935726433781634,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421
|short_description=p4@Hdgfrp3
}}

Revision as of 14:22, 14 September 2013

Short description:p4@Hdgfrp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Hdgfrp3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -97bp_to_ENSMUST00000107305_5end
EntrezGene:Hdgfrp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Hdgfrp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.59
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.58e-2064
neural plate1.58e-2064
presumptive neural plate1.58e-2064
pre-chordal neural plate4.65e-2049
gray matter5.20e-1934
neural tube4.57e-1852
neural rod4.57e-1852
future spinal cord4.57e-1852
neural keel4.57e-1852
regional part of nervous system5.33e-1754
central nervous system1.12e-1673
brain grey matter1.89e-1629
regional part of telencephalon1.89e-1629
telencephalon1.89e-1629
ecto-epithelium3.00e-1673
anterior neural tube5.00e-1640
nervous system7.38e-1675
ectoderm-derived structure9.69e-1695
ectoderm9.69e-1695
presumptive ectoderm9.69e-1695
regional part of forebrain1.38e-1539
forebrain1.38e-1539
future forebrain1.38e-1539
brain2.24e-1547
future brain2.24e-1547
regional part of brain8.84e-1546
cerebral cortex3.35e-1121
cerebral hemisphere3.35e-1121
pallium3.35e-1121
structure with developmental contribution from neural crest8.25e-1192
regional part of cerebral cortex1.73e-0717
corpus striatum4.16e-075
striatum4.16e-075
ventral part of telencephalon4.16e-075
future corpus striatum4.16e-075







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