FFCP PHASE1:Mm9::chr8:127163236..127163240,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=636|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:127163236..127163240,-|id=chr8:127163236..127163240,-|ontology_enrichment_celltype=CL:0000055!2.27e-14!50;CL:0002319!2.06e-11!43;CL:0000117!2.85e-11!23;CL:0000337!2.85e-11!23;CL:0000221!3.87e-11!44;CL:0000133!3.87e-11!44;CL:0000393!7.18e-11!39;CL:0000211!7.18e-11!39;CL:0000540!1.88e-07!33;CL:0000047!1.88e-07!33;CL:0000031!1.88e-07!33;CL:0000404!1.88e-07!33;CL:0002453!7.64e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,1.06e-20,8;CL:0002319,2.40e-17,43;CL:0000221,7.49e-17,44;CL:0000133,7.49e-17,44;CL:0002321,2.43e-16,70;CL:0000333,2.83e-16,10;CL:0000095,2.83e-16,10;CL:0000243,2.83e-16,10;CL:0000123,2.83e-16,10;CL:0000125,2.83e-16,10;CL:0000030,2.83e-16,10;CL:0000339,2.83e-16,10;CL:0000128,4.80e-16,6;CL:0000126,4.80e-16,6;CL:0000127,4.80e-16,6;CL:0000393,2.23e-13,39;CL:0000211,2.23e-13,39;CL:0000680,1.10e-11,6;CL:0000187,1.10e-11,6;CL:0000056,1.10e-11,6;CL:0000723,4.45e-11,91;CL:0000048,4.45e-11,91;CL:0000117,7.47e-11,23;CL:0000337,7.47e-11,23;CL:0000034,4.64e-10,97;CL:0000222,5.90e-10,7;CL:0002494,1.50e-09,3;CL:0000737,1.50e-09,3;CL:0000746,1.50e-09,3;CL:0000513,1.50e-09,3;CL:0002610,2.25e-08,3;CL:0000355,1.21e-07,9;CL:0000540,6.39e-07,33;CL:0000047,6.39e-07,33;CL:0000031,6.39e-07,33;CL:0000404,6.39e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.68e-09!73;UBERON:0005743!8.68e-09!73;UBERON:0000073!1.84e-08!75;UBERON:0001016!1.84e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-10,73;UBERON:0001016,2.76e-10,75;UBERON:0000073,1.83e-08,54;UBERON:0004684,2.25e-08,3;UBERON:0002275,2.25e-08,3;UBERON:0001134,1.21e-07,9;UBERON:0002036,1.21e-07,9;UBERON:0002385,1.21e-07,9;UBERON:0000486,1.21e-07,9;UBERON:0007503,1.21e-07,9;UBERON:0001015,1.21e-07,9;UBERON:0002329,1.21e-07,9;UBERON:0003082,1.21e-07,9;UBERON:0003059,1.21e-07,9;UBERON:0007282,1.21e-07,9;UBERON:0004290,1.21e-07,9;UBERON:0009618,1.21e-07,9;UBERON:0004121,3.81e-07,95;UBERON:0000924,3.81e-07,95;UBERON:0006601,3.81e-07,95;UBERON:0000383,7.80e-07,10|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0.699561878128147,0,0,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,2.14024590558481,1.92616169317078,0.917733760808408,3.12956537739216,2.18025156380447,2.19686182734472,2.3331587888914,1.53985063787899,4.31257693094915,0,0,0,6.68874533693462,10.601737277734,6.70373719960675,0.809265843438391,0.528990979272033,1.26766280701236,1.0165335962074,2.66788438833342,2.2497492932035,0,0.7104801149461,1.49800055259202,3.07374644257244,0.518448061542388,1.89008313664367,1.05162480675691,1.42825492201902,1.32521124570968,0.489963196859816,0.862609239164127,0.919218786610021,2.20231761998777,1.78762273319263,1.53606533256243,0.659431438650969,1.37231465403614,0.52091337055676,0.558365998002762,0.56276261003168,2.59757021220577,1.17851434189467,0.284743361598206,0.559198337475902,0.302904773332736,0,0,0,0,0,0,0,0,1.53387290320252,2.59786004602869,1.7666978725517,0.14084341977668,0,0,0,0,0.506719730950197,0,0.22836775943812,0,0,0,0.608930956624282,0,0.452167921657868,0,0.251333182659351,0.494389935468748,0.433798070759735,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0.628340120440365,0,0.11981512450592,0,0.254140454146129,0,0,0,0.347648640384553,0.255715457330331,0.62336413367868,0,0.305518091550949,0.373220911830279,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0.384341160854549,0.281105173679186,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0,0.61734640922383,0,0,0,0,0.207125772535502,0,0,0.710234206755631,0.787056926989615,0.308534225774757,0.465067889500816,1.07309360559848,0.116765342367169,0,0.656669856316381,0.324275238183423,0.730999937126662,0.439100230582101,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0.823494773620054,0.754005626400808,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.569003702859245,0,1.1270773567308,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0.50925170356284,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0.390267295715598,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0.80275294993896,0,0,0.252470927204373,0,0,0,0.238968797952552,0,0,0.809621403349789,0.876767573733936,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.162886959353576,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0,0,0.516856586336442,0.727067458955011,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0,0.304464949114599,0,0.42366414172764,0.661585194164886,0.16488625294148,0.645857706783622,0.0603129249281559,0.238744688006273,0.328281799490123,0,0.18542530201051,0.170870880797853,0.412773735926445,0.370389054739423,0.753473828018764,0.136694227721025,0.457556346413045,0,0.139951452323658,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.418176592028937,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0.598066184175915,0,0.388902376688095,0.387479470433193,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.608175645870493,0.205421914329655,0,0.179026695667481,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,0.563047426353546,0.549454872801795,0.857473516316263,0,0,0.460325236507177,0.572895513439397,1.20297227640581,1.37016503954128,0,0,0.900642406448441,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.655490552289177,0.384150914429216,0.229741875822453,0.476293691283074,0.347652977834566,0,0,0.147198920134397,1.02860775715625,0.70990322463735,0,0.290692833264657,0.376437521661322,0.169229215783353,0,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.771626443924566,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p@chr8:127163236..127163240,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=636 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:127163236..127163240,- | |||
|id=chr8:127163236..127163240,- | |||
|ontology_enrichment_celltype=CL:0000055!2.27e-14!50;CL:0002319!2.06e-11!43;CL:0000117!2.85e-11!23;CL:0000337!2.85e-11!23;CL:0000221!3.87e-11!44;CL:0000133!3.87e-11!44;CL:0000393!7.18e-11!39;CL:0000211!7.18e-11!39;CL:0000540!1.88e-07!33;CL:0000047!1.88e-07!33;CL:0000031!1.88e-07!33;CL:0000404!1.88e-07!33;CL:0002453!7.64e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.06e-20,8;CL:0002319,2.40e-17,43;CL:0000221,7.49e-17,44;CL:0000133,7.49e-17,44;CL:0002321,2.43e-16,70;CL:0000333,2.83e-16,10;CL:0000095,2.83e-16,10;CL:0000243,2.83e-16,10;CL:0000123,2.83e-16,10;CL:0000125,2.83e-16,10;CL:0000030,2.83e-16,10;CL:0000339,2.83e-16,10;CL:0000128,4.80e-16,6;CL:0000126,4.80e-16,6;CL:0000127,4.80e-16,6;CL:0000393,2.23e-13,39;CL:0000211,2.23e-13,39;CL:0000680,1.10e-11,6;CL:0000187,1.10e-11,6;CL:0000056,1.10e-11,6;CL:0000723,4.45e-11,91;CL:0000048,4.45e-11,91;CL:0000117,7.47e-11,23;CL:0000337,7.47e-11,23;CL:0000034,4.64e-10,97;CL:0000222,5.90e-10,7;CL:0002494,1.50e-09,3;CL:0000737,1.50e-09,3;CL:0000746,1.50e-09,3;CL:0000513,1.50e-09,3;CL:0002610,2.25e-08,3;CL:0000355,1.21e-07,9;CL:0000540,6.39e-07,33;CL:0000047,6.39e-07,33;CL:0000031,6.39e-07,33;CL:0000404,6.39e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.68e-09!73;UBERON:0005743!8.68e-09!73;UBERON:0000073!1.84e-08!75;UBERON:0001016!1.84e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-10,73;UBERON:0001016,2.76e-10,75;UBERON:0000073,1.83e-08,54;UBERON:0004684,2.25e-08,3;UBERON:0002275,2.25e-08,3;UBERON:0001134,1.21e-07,9;UBERON:0002036,1.21e-07,9;UBERON:0002385,1.21e-07,9;UBERON:0000486,1.21e-07,9;UBERON:0007503,1.21e-07,9;UBERON:0001015,1.21e-07,9;UBERON:0002329,1.21e-07,9;UBERON:0003082,1.21e-07,9;UBERON:0003059,1.21e-07,9;UBERON:0007282,1.21e-07,9;UBERON:0004290,1.21e-07,9;UBERON:0009618,1.21e-07,9;UBERON:0004121,3.81e-07,95;UBERON:0000924,3.81e-07,95;UBERON:0006601,3.81e-07,95;UBERON:0000383,7.80e-07,10 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0.699561878128147,0,0,0,0.595303031057488,0.198581902401771,0,0,0,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,2.14024590558481,1.92616169317078,0.917733760808408,3.12956537739216,2.18025156380447,2.19686182734472,2.3331587888914,1.53985063787899,4.31257693094915,0,0,0,6.68874533693462,10.601737277734,6.70373719960675,0.809265843438391,0.528990979272033,1.26766280701236,1.0165335962074,2.66788438833342,2.2497492932035,0,0.7104801149461,1.49800055259202,3.07374644257244,0.518448061542388,1.89008313664367,1.05162480675691,1.42825492201902,1.32521124570968,0.489963196859816,0.862609239164127,0.919218786610021,2.20231761998777,1.78762273319263,1.53606533256243,0.659431438650969,1.37231465403614,0.52091337055676,0.558365998002762,0.56276261003168,2.59757021220577,1.17851434189467,0.284743361598206,0.559198337475902,0.302904773332736,0,0,0,0,0,0,0,0,1.53387290320252,2.59786004602869,1.7666978725517,0.14084341977668,0,0,0,0,0.506719730950197,0,0.22836775943812,0,0,0,0.608930956624282,0,0.452167921657868,0,0.251333182659351,0.494389935468748,0.433798070759735,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0.628340120440365,0,0.11981512450592,0,0.254140454146129,0,0,0,0.347648640384553,0.255715457330331,0.62336413367868,0,0.305518091550949,0.373220911830279,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0.384341160854549,0.281105173679186,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0,0.61734640922383,0,0,0,0,0.207125772535502,0,0,0.710234206755631,0.787056926989615,0.308534225774757,0.465067889500816,1.07309360559848,0.116765342367169,0,0.656669856316381,0.324275238183423,0.730999937126662,0.439100230582101,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0.823494773620054,0.754005626400808,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.569003702859245,0,1.1270773567308,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0.50925170356284,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0.390267295715598,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0.80275294993896,0,0,0.252470927204373,0,0,0,0.238968797952552,0,0,0.809621403349789,0.876767573733936,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.162886959353576,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0,0,0.516856586336442,0.727067458955011,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0,0.304464949114599,0,0.42366414172764,0.661585194164886,0.16488625294148,0.645857706783622,0.0603129249281559,0.238744688006273,0.328281799490123,0,0.18542530201051,0.170870880797853,0.412773735926445,0.370389054739423,0.753473828018764,0.136694227721025,0.457556346413045,0,0.139951452323658,0,0,0.316335993581135,0.609958401380546,0.216010681643603,0.418176592028937,0,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0.598066184175915,0,0.388902376688095,0.387479470433193,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0.608175645870493,0.205421914329655,0,0.179026695667481,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,0.563047426353546,0.549454872801795,0.857473516316263,0,0,0.460325236507177,0.572895513439397,1.20297227640581,1.37016503954128,0,0,0.900642406448441,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.655490552289177,0.384150914429216,0.229741875822453,0.476293691283074,0.347652977834566,0,0,0.147198920134397,1.02860775715625,0.70990322463735,0,0.290692833264657,0.376437521661322,0.169229215783353,0,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.771626443924566,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr8:127163236..127163240,- | |||
}} |
Revision as of 15:08, 14 September 2013
Short description: | p@chr8:127163236..127163240, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:127163236..127163240, - |
Coexpression cluster: | MCL_coexpression_mm9:636 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.07e-10 | 73 |
nervous system | 2.76e-10 | 75 |
regional part of nervous system | 1.83e-08 | 54 |
raphe nuclei | 2.25e-08 | 3 |
reticular formation | 2.25e-08 | 3 |
skeletal muscle tissue | 1.21e-07 | 9 |
striated muscle tissue | 1.21e-07 | 9 |
muscle tissue | 1.21e-07 | 9 |
multilaminar epithelium | 1.21e-07 | 9 |
epithelial vesicle | 1.21e-07 | 9 |
musculature | 1.21e-07 | 9 |
somite | 1.21e-07 | 9 |
myotome | 1.21e-07 | 9 |
presomitic mesoderm | 1.21e-07 | 9 |
presumptive segmental plate | 1.21e-07 | 9 |
dermomyotome | 1.21e-07 | 9 |
trunk paraxial mesoderm | 1.21e-07 | 9 |
ectoderm-derived structure | 3.81e-07 | 95 |
ectoderm | 3.81e-07 | 95 |
presumptive ectoderm | 3.81e-07 | 95 |
musculature of body | 7.80e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.