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FFCP PHASE1:Mm9::chr2:180701923..180701994,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=228998|HGNC=|UniProt=Q9EPJ9,Q3TGS9,Q6PB94,Q05DE0|association_with_transcript=0bp_to_ENSMUST00000029092,ENSMUST00000098981,ENSMUST00000108860,ENSMUST00000108861,ENSMUST00000108862,ENSMUST00000132627,ENSMUST00000136590,ENSMUST00000145629,NM_001177707,NM_001177708,NM_001177709,NM_001177710,NM_145760,uc008okj.2,uc008okk.2,uc008okl.2,uc008okm.2,uc008okn.2_5end|description=CAGE_peak_1_at_Arfgap1_5end|id=chr2:180701923..180701994,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.38e-11!73;UBERON:0005743!3.38e-11!73;UBERON:0000073!3.90e-10!75;UBERON:0001016!3.90e-10!75;UBERON:0001049!2.56e-09!52;UBERON:0005068!2.56e-09!52;UBERON:0006241!2.56e-09!52;UBERON:0007135!2.56e-09!52;UBERON:0000955!3.17e-09!50;UBERON:0006238!3.17e-09!50;UBERON:0002616!4.48e-09!49;UBERON:0002021!4.92e-08!10;UBERON:0000411!4.92e-08!10;UBERON:0001950!4.92e-08!10;UBERON:0002020!5.74e-08!34;UBERON:0003080!8.36e-08!40;UBERON:0002780!1.23e-07!39;UBERON:0001890!1.23e-07!39;UBERON:0006240!1.23e-07!39;UBERON:0000033!7.65e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.38e-11,73;UBERON:0000073,1.34e-10,54;UBERON:0001016,3.90e-10,75;UBERON:0001049,2.56e-09,52;UBERON:0005068,2.56e-09,52;UBERON:0006241,2.56e-09,52;UBERON:0007135,2.56e-09,52;UBERON:0000955,3.78e-08,47;UBERON:0006238,3.78e-08,47;UBERON:0004121,4.05e-08,95;UBERON:0000924,4.05e-08,95;UBERON:0006601,4.05e-08,95;UBERON:0002021,4.92e-08,10;UBERON:0000411,4.92e-08,10;UBERON:0001950,4.92e-08,10;UBERON:0002616,5.31e-08,46;UBERON:0002020,5.74e-08,34;UBERON:0003080,8.36e-08,40;UBERON:0002780,1.23e-07,39;UBERON:0001890,1.23e-07,39;UBERON:0006240,1.23e-07,39;UBERON:0002346,3.36e-07,64;UBERON:0003075,3.36e-07,64;UBERON:0007284,3.36e-07,64|phase1_expression=27.225304007815,42.2260243243627,56.874904923692,55.9558790917636,46.5833028850103,21.32066753281,24.5293272625302,26.21203465864,19.42884365693,13.3416780003536,22.9432077422177,18.7464573639041,28.2481204386489,27.5374267619842,17.6548173762301,15.3881203216268,25.8837894907414,24.4483178152634,24.9548269162445,28.434106670468,27.5540260089466,13.9007331681239,14.8883879809193,22.2389467682835,25.693839479523,34.4539178469012,27.5687677541808,24.1327780608196,25.2731147876977,17.8941392129551,21.2861290229093,21.5910428976275,23.3724619282137,15.8481681015439,15.8868390863201,12.4675984018869,15.3127017196777,43.9458212273753,26.5654017138092,37.1701858221397,52.9408339227913,51.2284113718834,38.3553178894611,17.877348152532,17.9437168258541,20.0065959856233,28.9484797408774,26.1630187656536,25.2639110144643,16.9154012194627,24.2176509411877,33.0630898039435,32.5498255752009,42.071004236658,43.0200062902354,44.7631418702548,34.097479352712,35.5813743671435,28.5266209812033,30.6814767977779,34.8607271928399,41.6778774445032,30.2360230677787,33.7462393980525,27.6882581518753,31.2611250576284,33.5552123780613,26.5110630671873,28.5146433848314,28.4862529879867,24.1873705554089,37.7059299413021,37.5476519617743,24.3756690437759,31.8206963780545,33.0918763179608,38.540558349786,44.179818977475,37.0191745147547,32.5759130693579,31.6547246864337,26.5665818983948,36.0146068711781,43.895483582471,39.7275444219706,35.6500588423138,37.0166370077668,35.4158947068071,22.4906794199557,17.6837450649878,28.4067198927644,18.9293252935905,25.1589393471868,23.2072372404261,25.9910566979068,21.9533174677694,16.8533304158102,24.2011058060842,26.2383864648897,30.0338638333789,25.0701287202491,39.7812079984385,73.8935195149272,63.9960032837998,20.9996309780878,15.9616715249312,18.1988800205322,15.4148237620731,24.8580368301285,21.3756680253348,27.9311376093479,25.2706346999077,20.0635482612771,23.3620092856565,30.4554751481475,18.3473223341326,35.3488803860155,18.7979163995885,23.8844849026466,48.0447544343805,35.1138014352026,32.9715172131951,24.2309289583559,37.1831612204665,45.2404886717063,28.1002760729451,17.1335628043466,19.196887391789,13.0882333885257,33.1037313084658,42.5475560621323,34.9319098873763,44.8466746096073,53.1888151247088,29.7136903720171,40.2358332408039,51.2252000167091,31.5993705349636,60.9061847825156,23.3590460033986,19.6481868873683,28.2779588453172,20.5270827978098,26.0719334855787,31.7730451036701,27.1601087003882,25.8616759784852,26.9051505568576,16.8143034487617,27.9876998648373,32.9028602186584,37.9208617099704,41.4290401346141,46.6657903139703,40.3332987359569,29.2580372223185,15.4486901208912,17.2423097766859,17.3339734631312,27.9619792922928,21.8109235782419,24.8485644816201,30.7768156260773,26.7599355176469,19.2833891109223,24.8811320882936,24.4128795273653,28.7242742223237,28.4688540350321,25.938459324497,19.6186519100971,20.7603982143972,19.9790604914856,18.9231050452124,38.9036404843635,24.2854885215111,43.2848605708775,22.4782981664013,21.1155368029882,19.9723537799977,26.4178295710291,28.0340099226446,23.7944506914011,30.0556489257843,19.455691523325,31.7868982617341,28.65221380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|EntrezGene=228998
|HGNC=
|UniProt=Q9EPJ9,Q3TGS9,Q6PB94,Q05DE0
|association_with_transcript=0bp_to_ENSMUST00000029092,ENSMUST00000098981,ENSMUST00000108860,ENSMUST00000108861,ENSMUST00000108862,ENSMUST00000132627,ENSMUST00000136590,ENSMUST00000145629,NM_001177707,NM_001177708,NM_001177709,NM_001177710,NM_145760,uc008okj.2,uc008okk.2,uc008okl.2,uc008okm.2,uc008okn.2_5end
|description=CAGE_peak_1_at_Arfgap1_5end
|id=chr2:180701923..180701994,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.38e-11!73;UBERON:0005743!3.38e-11!73;UBERON:0000073!3.90e-10!75;UBERON:0001016!3.90e-10!75;UBERON:0001049!2.56e-09!52;UBERON:0005068!2.56e-09!52;UBERON:0006241!2.56e-09!52;UBERON:0007135!2.56e-09!52;UBERON:0000955!3.17e-09!50;UBERON:0006238!3.17e-09!50;UBERON:0002616!4.48e-09!49;UBERON:0002021!4.92e-08!10;UBERON:0000411!4.92e-08!10;UBERON:0001950!4.92e-08!10;UBERON:0002020!5.74e-08!34;UBERON:0003080!8.36e-08!40;UBERON:0002780!1.23e-07!39;UBERON:0001890!1.23e-07!39;UBERON:0006240!1.23e-07!39;UBERON:0000033!7.65e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.38e-11,73;UBERON:0000073,1.34e-10,54;UBERON:0001016,3.90e-10,75;UBERON:0001049,2.56e-09,52;UBERON:0005068,2.56e-09,52;UBERON:0006241,2.56e-09,52;UBERON:0007135,2.56e-09,52;UBERON:0000955,3.78e-08,47;UBERON:0006238,3.78e-08,47;UBERON:0004121,4.05e-08,95;UBERON:0000924,4.05e-08,95;UBERON:0006601,4.05e-08,95;UBERON:0002021,4.92e-08,10;UBERON:0000411,4.92e-08,10;UBERON:0001950,4.92e-08,10;UBERON:0002616,5.31e-08,46;UBERON:0002020,5.74e-08,34;UBERON:0003080,8.36e-08,40;UBERON:0002780,1.23e-07,39;UBERON:0001890,1.23e-07,39;UBERON:0006240,1.23e-07,39;UBERON:0002346,3.36e-07,64;UBERON:0003075,3.36e-07,64;UBERON:0007284,3.36e-07,64
|phase1_expression=27.225304007815,42.2260243243627,56.874904923692,55.9558790917636,46.5833028850103,21.32066753281,24.5293272625302,26.21203465864,19.42884365693,13.3416780003536,22.9432077422177,18.7464573639041,28.2481204386489,27.5374267619842,17.6548173762301,15.3881203216268,25.8837894907414,24.4483178152634,24.9548269162445,28.434106670468,27.5540260089466,13.9007331681239,14.8883879809193,22.2389467682835,25.693839479523,34.4539178469012,27.5687677541808,24.1327780608196,25.2731147876977,17.8941392129551,21.2861290229093,21.5910428976275,23.3724619282137,15.8481681015439,15.8868390863201,12.4675984018869,15.3127017196777,43.9458212273753,26.5654017138092,37.1701858221397,52.9408339227913,51.2284113718834,38.3553178894611,17.877348152532,17.9437168258541,20.0065959856233,28.9484797408774,26.1630187656536,25.2639110144643,16.9154012194627,24.2176509411877,33.0630898039435,32.5498255752009,42.071004236658,43.0200062902354,44.7631418702548,34.097479352712,35.5813743671435,28.5266209812033,30.6814767977779,34.8607271928399,41.6778774445032,30.2360230677787,33.7462393980525,27.6882581518753,31.2611250576284,33.5552123780613,26.5110630671873,28.5146433848314,28.4862529879867,24.1873705554089,37.7059299413021,37.5476519617743,24.3756690437759,31.8206963780545,33.0918763179608,38.540558349786,44.179818977475,37.0191745147547,32.5759130693579,31.6547246864337,26.5665818983948,36.0146068711781,43.895483582471,39.7275444219706,35.6500588423138,37.0166370077668,35.4158947068071,22.4906794199557,17.6837450649878,28.4067198927644,18.9293252935905,25.1589393471868,23.2072372404261,25.9910566979068,21.9533174677694,16.8533304158102,24.2011058060842,26.2383864648897,30.0338638333789,25.0701287202491,39.7812079984385,73.8935195149272,63.9960032837998,20.9996309780878,15.9616715249312,18.1988800205322,15.4148237620731,24.8580368301285,21.3756680253348,27.9311376093479,25.2706346999077,20.0635482612771,23.3620092856565,30.4554751481475,18.3473223341326,35.3488803860155,18.7979163995885,23.8844849026466,48.0447544343805,35.1138014352026,32.9715172131951,24.2309289583559,37.1831612204665,45.2404886717063,28.1002760729451,17.1335628043466,19.196887391789,13.0882333885257,33.1037313084658,42.5475560621323,34.9319098873763,44.8466746096073,53.1888151247088,29.7136903720171,40.2358332408039,51.2252000167091,31.5993705349636,60.9061847825156,23.3590460033986,19.6481868873683,28.2779588453172,20.5270827978098,26.0719334855787,31.7730451036701,27.1601087003882,25.8616759784852,26.9051505568576,16.8143034487617,27.9876998648373,32.9028602186584,37.9208617099704,41.4290401346141,46.6657903139703,40.3332987359569,29.2580372223185,15.4486901208912,17.2423097766859,17.3339734631312,27.9619792922928,21.8109235782419,24.8485644816201,30.7768156260773,26.7599355176469,19.2833891109223,24.8811320882936,24.4128795273653,28.7242742223237,28.4688540350321,25.938459324497,19.6186519100971,20.7603982143972,19.9790604914856,18.9231050452124,38.9036404843635,24.2854885215111,43.2848605708775,22.4782981664013,21.1155368029882,19.9723537799977,26.4178295710291,28.0340099226446,23.7944506914011,30.0556489257843,19.455691523325,31.7868982617341,28.6522138032307,24.8695590051439,30.4143975905827,25.1669434423182,24.8558757355898,28.8754846218832,23.8981555200883,22.1642114462874,28.1769339182701,22.6052973908299,18.6194387680921,28.61541451525,22.9548629761054,16.8275568696746,15.6998727841375,18.0159859325829,19.5658733877518,16.017130148745,16.3143965943958,18.6635553279429,18.8659912891308,24.3588931349941,25.462585178142,23.5910832709665,19.6183624397793,23.8868429473631,37.3797336971122,26.0498663367952,19.6583734062173,18.185679212192,20.8100999685418,14.9557491622644,21.985629629826,30.1291344715071,26.4003261836082,25.292017780503,26.9893785531777,25.1259386162724,26.8989314201196,30.8311163615322,27.270879930371,27.2401568267993,34.9205943359897,23.9240439484977,24.866637388689,26.6154267789981,34.6819953060326,26.6513785071168,22.1293922858566,33.9402197954821,25.8486449880345,29.5373450212352,16.8852993737976,22.7223834483936,25.2406575533005,26.9402733564681,38.560788194171,36.3232572887879,40.3265600089133,42.7445561491137,23.074209995469,29.8100975069538,32.0183100136684,32.7747742750243,30.8009984901943,45.0505977278156,47.8887660499514,34.9736660701775,43.8058956521877,25.4919667962731,27.5114436837923,26.9705264050934,34.2550195741696,39.6591340847666,39.7979571479061,35.989839218273,36.3627325952416,41.4008152895919,39.0048851727495,36.0974401368654,59.2364914011591,20.5269647195694,26.2598128078992,28.2924886241702,31.743901821967,36.3872387908224,38.3399218002942,71.5492630419308,30.2726503402186,45.1202310939937,27.3455213588153,32.647478082413,34.8763161663156,26.296435268676,23.9938411446304,24.9494167612493,36.1436237421015,27.2575193955449,15.3783792718067,28.6877746468879,20.1862034832986,17.706634958441,18.0436380591753,16.7008066440762,23.9669586291336,25.3312128705821,25.8433951014272,21.9574242143476,22.7761915378417,32.7344342074226,30.2414954301044,25.9269487057941,22.4913440658563,26.5682762378097,28.4327887695156,21.7257431846745,25.4045347651914,45.9791091684325,29.8757257502621,33.7907394059392,32.7607811105053,38.1124329154333,32.160796045955,27.7088045804876,34.5030281618517,33.2021181352073,26.5294141397048,24.8831644450786,29.0910306320444,19.5926894789471,30.2060570782345,19.9259256899765,18.7085985088025,21.8412568714327,26.6233015406895,20.0726400698348,22.005739549012,22.9193841382295,24.4623849362549,25.8115033950312,22.4153125701431,26.2658327678099,30.6217483715711,23.579959895982,22.6425672441546,16.4176357595341,20.9855770455098,21.4440449375731,29.4661486458356,27.4727436400898,24.6523635940926,31.5990425542279,63.8169582157285,64.9058583475119,60.1540289111366,53.6181928912305,75.3590771747706,71.7624202520215,66.8272275229488,62.5946472481666,76.1279247093464,64.2022786572257,11.4166082342594,29.1288157582753,31.0735162472524,34.0349403895612,22.6382215638221,24.2673431154019,29.5588147976148,28.6388729562063,28.2408904440797,37.399187341042,28.6431608875971,33.1982360839494,29.497074853013,27.5948406864987,31.7618143324541,32.387971007249,35.3447194131809,31.2512937151202,31.7306143618546,33.8557516309114,31.2011019670728,29.6384596286094,28.8507789836258,27.3251263268778,29.1739079287525,27.9228206042532,27.9879798495342,35.2513413326709,31.2349461845482,35.3519631144375,33.0991700566446,33.4915240076916,39.2861801442902,33.7762313785406,32.794123866794,35.9727232230642,31.3468355316847,41.040371323225,43.996316375834,39.9270468606323,32.2296291512386
|short_description=p1@Arfgap1
}}

Revision as of 23:14, 13 September 2013

Short description:p1@Arfgap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arfgap1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000029092, ENSMUST00000098981, ENSMUST00000108860, ENSMUST00000108861, ENSMUST00000108862, ENSMUST00000132627, ENSMUST00000136590, ENSMUST00000145629, NM_001177707, NM_001177708, NM_001177709, NM_001177710, NM_145760, uc008okj.2, uc008okk.2, uc008okl.2, uc008okm.2, uc008okn.2_5end
EntrezGene:Arfgap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arfgap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G727.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I542.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I656.87
CD326+ enterocyte, pool1.CNhs13542.11848-124I355.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I446.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.32
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I824.53
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E622.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E428.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E827.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.39
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.90
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.89
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D122.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.69
GP2+ M cell, pool1.CNhs13228.11845-124H934.45
GP2+ M cell, pool2.CNhs13231.11846-124I127.57
GP2+ M cell, pool3.CNhs13240.11847-124I224.13
Ileum epithelium, pool1.CNhs13199.10252-104B925.27
Ileum epithelium, pool2.CNhs13232.10253-104C117.89
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C821.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I321.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G623.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F515.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G843.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H126.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H337.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G952.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H251.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H438.36
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B320.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C226.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B825.26
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C316.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C433.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A232.55
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I942.07
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A143.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C144.76
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E134.10
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C535.58
Mouse Granule cells, donor1.CNhs12131.11713-123C328.53
Mouse Granule cells, donor2.CNhs12357.11731-123E330.68
Mouse Granule cells, donor3.CNhs12108.11636-122C734.86
Mouse Meningeal cells, donor1.CNhs12132.11716-123C641.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D130.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C733.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E727.69
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D231.26
Mouse Microglia, donor1.CNhs12629.11718-123C833.56
Mouse Microglia, donor2.CNhs12634.11736-123E826.51
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.51
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F528.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D924.19
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F137.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F231.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D338.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F344.18
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D737.02
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D432.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.01
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I639.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F637.02
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.42
Mouse Schwann, donor1.CNhs12507.11728-123D922.49
Mouse Schwann, donor2.CNhs12573.11746-123F917.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C425.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.21
Mouse hepatocyte, donor6.CNhs13090.11822-124F425.99
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.95
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E326.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I830.03
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H139.78
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I873.89
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G121.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.41
accessory axillary lymph node, adult.CNhs10475.1063-29H924.86
adrenal gland, adult.CNhs10508.49-24D721.38
adrenal gland, embryo E14.CNhs11038.406-44C527.93
adrenal gland, embryo E16.CNhs11004.1254-43D625.27
adrenal gland, embryo E17.CNhs11043.1263-45I120.06
adrenal gland, embryo E18.CNhs11026.1262-18F523.36
adrenal gland, neonate N00.CNhs11191.1311-23C130.46
adrenal gland, neonate N25.CNhs11223.1377-27I318.35
amnion, adult pregnant day17.5.CNhs10488.583-22A835.35
aorta, adult.CNhs10498.46-23H118.80
bone (os femoris), adult.CNhs10483.56-12G223.88
bone (os femoris), neonate N02.CNhs11227.1985-43F548.04
bone (os femoris), neonate N16.CNhs11225.1525-43A635.11
bone (os femoris), neonate N20.CNhs11195.1350-25C332.97
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B237.18
cerebellum, neonate N30.CNhs11135.1395-42I245.24
colon, adult.CNhs10468.36-18H728.10
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.13
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.09
corpora quadrigemina, adult.CNhs10501.16-22A433.10
corpus striatum, adult.CNhs10487.19-21D842.55
corpus striatum, neonate N00.CNhs11226.630-43F134.93
cortex, adult.CNhs10473.12-14D544.85
cortex, neonate N30.CNhs11107.1392-42F253.19
diencephalon, adult.CNhs10482.20-12F229.71
diencephalon, neonate N30.CNhs11201.1388-42B240.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B151.23
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A231.60
epididymis, adult.CNhs10490.58-23B260.91
eyeball, adult.CNhs10484.31-12G423.36
eyeball, embryo E12.CNhs11016.345-16C619.65
eyeball, embryo E14.CNhs10521.399-16E228.28
eyeball, embryo E15.CNhs10593.426-16C920.53
eyeball, embryo E17.CNhs11023.1261-18D426.07
eyeball, neonate N00.CNhs11207.633-15C631.77
eyeball, neonate N01.CNhs11140.1532-43E727.16
eyeball, neonate N02.CNhs11205.1551-44G825.86
eyeball, neonate N16.CNhs11188.777-19A226.91
forelimb, embryo E11.CNhs10596.335-25E216.81
forelimb, embryo E12.CNhs10600.359-14H227.99
forelimb, embryo E13.CNhs10589.384-1E232.90
forelimb, embryo E14.CNhs10577.413-26A837.92
forelimb, embryo E15.CNhs11007.437-20E741.43
forelimb, embryo E17.CNhs10598.1517-43C446.67
forelimb, embryo E18.CNhs11008.1520-43B540.33
gonad, embryo E13.CNhs11044.1564-45I629.26
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C815.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D217.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.33
heart, embryo E11.CNhs10586.331-24E927.96
heart, embryo E12.CNhs11015.353-12F521.81
heart, embryo E13.CNhs11013.376-3I924.85
heart, embryo E14.CNhs10597.403-26D430.78
heart, embryo E15.CNhs11017.431-16C826.76
heart, embryo E16.CNhs11021.457-17C619.28
heart, embryo E17.CNhs11025.479-18E524.88
heart, embryo E18.CNhs11030.1283-20G324.41
heart, neonate N00.CNhs11213.639-21E328.72
heart, neonate N03.CNhs11221.1349-25I228.47
heart, neonate N10.CNhs11118.749-24G125.94
heart, neonate N16.CNhs11209.782-15G119.62
heart, neonate N20.CNhs11127.821-26I620.76
heart, neonate N25.CNhs11196.1351-25D319.98
heart, neonate N30.CNhs11202.1390-42D218.92
hippocampus, adult.CNhs10478.13-16E838.90
hippocampus, neonate N00.CNhs11228.627-43G124.29
intestinal mucosa, adult.CNhs10506.860-29I343.28
intestine, adult.CNhs10496.178-9A322.48
intestine, embryo E12.CNhs11019.1251-16I521.12
intestine, embryo E13.CNhs11010.381-16D519.97
intestine, embryo E15.CNhs10602.976-16D826.42
intestine, embryo E16.CNhs10585.463-22H428.03
intestine, embryo E17.CNhs10582.482-18D323.79
intestine, embryo E18.CNhs10526.1289-20F730.06
intestine, neonate N00.CNhs11126.644-26D119.46
intestine, neonate N01.CNhs11192.1322-23E931.79
intestine, neonate N06.CNhs11102.688-20B828.65
intestine, neonate N07.CNhs11095.720-20F224.87
intestine, neonate N10.CNhs11098.755-23A530.41
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E324.86
intestine, neonate N30.CNhs11131.1384-42G128.88
kidney, embryo E14.CNhs10606.411-4I923.90
kidney, embryo E15.CNhs10997.434-16F822.16
kidney, embryo E16.CNhs10584.464-22A528.18
kidney, embryo E17.CNhs11028.483-18I222.61
kidney, embryo E18.CNhs11001.1288-20C718.62
kidney, neonate N00.CNhs11214.646-21G728.62
kidney, neonate N10.CNhs11206.758-6D522.95
kidney, neonate N20.CNhs11113.832-19I116.83
kidney, neonate N25.CNhs11122.1353-25F315.70
kidney, neonate N30.CNhs11203.1385-42H118.02
liver, adult pregnant day01.CNhs10466.508-5B219.57
liver, embryo E12.CNhs10601.355-15F816.02
liver, embryo E13.CNhs10524.378-3H616.31
liver, embryo E14.CNhs10594.409-16E118.66
liver, embryo E15.CNhs10520.433-16D718.87
liver, embryo E16.CNhs10523.462-17F524.36
liver, embryo E17.CNhs10510.481-18A325.46
liver, embryo E18.CNhs10579.499-43G423.59
liver, neonate N00.CNhs11117.641-24F419.62
liver, neonate N03.CNhs11123.1345-25G223.89
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H226.05
liver, neonate N10.CNhs11115.751-24B919.66
liver, neonate N20.CNhs11220.823-25A318.19
liver, neonate N25.CNhs11198.1368-26H120.81
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B121.99
lung, embryo E12.CNhs10522.354-16G230.13
lung, embryo E14.CNhs10604.404-26F826.40
lung, embryo E15.CNhs11020.432-17C525.29
lung, embryo E16.CNhs10998.458-17B626.99
lung, embryo E17.CNhs10605.480-44A625.13
lung, embryo E18.CNhs10583.1287-20I626.90
lung, neonate N00.CNhs11224.640-42C630.83
lung, neonate N06.CNhs11212.683-20E527.27
lung, neonate N07.CNhs11111.715-19A327.24
lung, neonate N10.CNhs11219.750-23E634.92
lung, neonate N20.CNhs11109.822-18A423.92
lung, neonate N25.CNhs11119.1359-25C724.87
lung, neonate N30.CNhs11133.1394-42H226.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A134.68
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A126.65
mammary gland, adult lactating day02.CNhs10480.595-22B622.13
mammary gland, adult pregnant day19.CNhs10476.588-5H233.94
medulla oblongata, adult.CNhs10477.17-12C225.85
medulla oblongata, neonate N30.CNhs11200.1396-42A329.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.72
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E125.24
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E226.94
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E338.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D736.32
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D840.33
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D942.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D529.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D632.02
olfactory brain, adult.CNhs10489.18-22I932.77
ovary, adult.CNhs10507.91-2I730.80
ovary, embryo E18.CNhs11040.505-44H745.05
ovary, neonate N00.CNhs11217.1299-22I447.89
oviduct, adult pregnant day01.CNhs10500.988-6G634.97
pancreas, adult.CNhs10486.34-16E443.81
pancreas, embryo E14.CNhs11012.405-44F425.49
pancreas, embryo E15.CNhs11042.1556-45F227.51
pancreas, embryo E16.CNhs11003.460-26E526.97
pancreas, embryo E17.CNhs10599.1558-45G334.26
pancreas, embryo E18.CNhs10580.1535-43I739.66
pancreas, neonate N00.CNhs11105.645-26G939.80
pancreas, neonate N01.CNhs11138.1531-43D735.99
pancreas, neonate N02.CNhs11139.1539-43D836.36
pancreas, neonate N16.CNhs11136.787-43B641.40
pancreas, neonate N25.CNhs11094.1555-45E239.00
pancreas, neonate N30.CNhs11182.1548-44H536.10
pituitary gland, adult.CNhs10493.21-1G859.24
pituitary gland, embryo E12.CNhs11018.346-16E620.53
pituitary gland, embryo E13.CNhs11009.370-44C726.26
pituitary gland, embryo E14.CNhs11037.398-44A528.29
pituitary gland, embryo E15.CNhs10592.427-16B931.74
pituitary gland, embryo E16.CNhs11036.449-43F636.39
pituitary gland, embryo E17.CNhs11039.1265-44F538.34
pituitary gland, neonate N00.CNhs11190.1308-22E971.55
placenta, adult pregnant day10.CNhs10472.539-13I730.27
placenta, adult pregnant day17.CNhs10464.577-18G345.12
prostate, adult.CNhs10470.859-1F827.35
skin, adult.CNhs10492.30-1C332.65
skin, neonate N00.CNhs11124.650-25G434.88
skin, neonate N03.CNhs11215.662-22H326.30
skin, neonate N06.CNhs11097.693-20I523.99
skin, neonate N10.CNhs11108.762-6C424.95
small intestine, neonate N16.CNhs11114.790-21I136.14
spinal cord, adult.CNhs10505.24-13C927.26
spleen, adult.CNhs10465.25-2G215.38
spleen, embryo E16.CNhs11035.461-43C128.69
spleen, embryo E18.CNhs11011.1271-21F220.19
spleen, neonate N10.CNhs11116.752-24D117.71
spleen, neonate N20.CNhs11112.824-19H118.04
spleen, neonate N25.CNhs11099.1354-25G316.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C623.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.84
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E322.78
stomach, embryo E15.CNhs10603.1252-16G832.73
stomach, embryo E16.CNhs11022.459-17D430.24
stomach, embryo E17.CNhs11006.1035-18D525.93
stomach, embryo E18.CNhs10999.1286-20C622.49
stomach, neonate N03.CNhs11193.1340-24B826.57
stomach, neonate N07.CNhs11210.718-18A928.43
stomach, neonate N25.CNhs11104.1355-25E421.73
stomach, neonate N30.CNhs11134.1386-42I125.40
submandibular gland, adult.CNhs10469.59-29C145.98
testis, adult.CNhs10504.57-7G529.88
testis, embryo E13.CNhs11031.389-23F533.79
testis, embryo E15.CNhs11034.443-27C532.76
testis, embryo E16.CNhs11033.470-26G538.11
testis, embryo E17.CNhs11029.486-18I532.16
testis, embryo E18.CNhs11027.503-18G527.71
testis, neonate N00.CNhs11189.1300-22B734.50
testis, neonate N07.CNhs11222.726-26I433.20
testis, neonate N10.CNhs11204.763-44D926.53
testis, neonate N20.CNhs11110.839-18H324.88
testis, neonate N30.CNhs11130.1391-42E229.09
thymus, adult.CNhs10471.38-12B519.59
thymus, embryo E14.CNhs11041.402-44I430.21
thymus, embryo E15.CNhs11005.430-45I219.93
thymus, embryo E16.CNhs11002.456-26C518.71
thymus, embryo E17.CNhs10581.478-18C121.84
thymus, embryo E18.CNhs10595.1273-19G426.62
thymus, neonate N02.CNhs11181.1541-43F820.07
thymus, neonate N03.CNhs11137.2104-43C722.01
thymus, neonate N06.CNhs11197.681-26C422.92
thymus, neonate N07.CNhs11211.713-19D324.46
thymus, neonate N10.CNhs11194.748-24E425.81
thymus, neonate N20.CNhs11186.820-7A222.42
thymus, neonate N25.CNhs11125.1362-25G726.27
thymus, neonate N30.CNhs11132.1393-42G230.62
tongue, adult.CNhs10499.32-1B423.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.64
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.99
urinary bladder, adult.CNhs10481.879-12E421.44
uterus, adult pregnant day19.CNhs10497.590-15F529.47
uterus, adult.CNhs10509.92-27E527.47
vagina, adult.CNhs10502.89-27D524.65
vesicular gland, adult.CNhs10491.51-27F831.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A163.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A264.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A360.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D753.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A475.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A571.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A666.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A762.59
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A876.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A964.20
whole body, embryo E11.CNhs11014.324-5I811.42
whole body, embryo E12.CNhs10587.857-27C929.13
whole body, embryo E13.CNhs10512.372-23H231.07
whole body, embryo E14.5.CNhs10578.420-27D234.03
whole body, embryo E14.CNhs10519.395-14B122.64
whole body, embryo E16.CNhs10514.453-14F224.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.64
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G528.24
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G537.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G528.64
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G529.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G531.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G532.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G535.34
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G531.25
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G531.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G533.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G531.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G529.64
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G528.85
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G527.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.17
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G527.99
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G531.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G535.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G533.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G533.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G539.29
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.78
whole body, embryo E17.5.CNhs10513.490-9F932.79
whole body, embryo E17.CNhs10517.475-3I535.97
whole body, embryo E18.CNhs10516.493-3B331.35
whole body, neonate N00.CNhs10525.657-19C241.04
whole body, neonate N01.CNhs10576.659-23C644.00
whole body, neonate N06.CNhs10515.692-21D139.93
whole body, neonate N10.CNhs10518.761-6B432.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.38e-1173
regional part of nervous system1.34e-1054
nervous system3.90e-1075
neural tube2.56e-0952
neural rod2.56e-0952
future spinal cord2.56e-0952
neural keel2.56e-0952
brain3.78e-0847
future brain3.78e-0847
ectoderm-derived structure4.05e-0895
ectoderm4.05e-0895
presumptive ectoderm4.05e-0895
occipital lobe4.92e-0810
visual cortex4.92e-0810
neocortex4.92e-0810
regional part of brain5.31e-0846
gray matter5.74e-0834
anterior neural tube8.36e-0840
regional part of forebrain1.23e-0739
forebrain1.23e-0739
future forebrain1.23e-0739
neurectoderm3.36e-0764
neural plate3.36e-0764
presumptive neural plate3.36e-0764







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