FFCP PHASE1:Mm9::chr2:110790499..110790510,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=228432|HGNC=|MCL_coexpression_id=2|UniProt=A2AHL1|association_with_transcript=18bp_to_ENSMUST00000111019_5end|description=CAGE_peak_4_at_Ano3_5end|id=chr2:110790499..110790510,-|ontology_enrichment_celltype=CL:0000107!6.27e-10!9;CL:0000393!5.14e-08!39;CL:0000211!5.14e-08!39|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.16e-24!75;UBERON:0001016!5.16e-24!75;UBERON:0001017!2.60e-23!73;UBERON:0005743!2.60e-23!73;UBERON:0002021!2.78e-22!10;UBERON:0000411!2.78e-22!10;UBERON:0001950!2.78e-22!10;UBERON:0000955!6.25e-20!50;UBERON:0006238!6.25e-20!50;UBERON:0002616!2.19e-18!49;UBERON:0004121!6.74e-18!102;UBERON:0000924!6.74e-18!102;UBERON:0006601!6.74e-18!102;UBERON:0000033!2.77e-17!63;UBERON:0001049!2.41e-15!52;UBERON:0005068!2.41e-15!52;UBERON:0006241!2.41e-15!52;UBERON:0007135!2.41e-15!52;UBERON:0002619!9.64e-15!17;UBERON:0002791!2.23e-14!29;UBERON:0003528!2.23e-14!29;UBERON:0001893!2.23e-14!29;UBERON:0003080!7.05e-14!40;UBERON:0000956!9.58e-14!21;UBERON:0001869!9.58e-14!21;UBERON:0000203!9.58e-14!21;UBERON:0002346!3.78e-13!71;UBERON:0003075!3.78e-13!71;UBERON:0007284!3.78e-13!71;UBERON:0002780!9.55e-13!39;UBERON:0001890!9.55e-13!39;UBERON:0006240!9.55e-13!39;UBERON:0003056!9.36e-12!49;UBERON:0002020!1.07e-11!34;UBERON:0007811!6.70e-11!86;UBERON:0000010!4.33e-10!11;UBERON:0002410!6.27e-10!9;UBERON:0000153!2.00e-09!94;UBERON:0002298!3.16e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.09e-58,10;UBERON:0000411,3.09e-58,10;UBERON:0001950,3.09e-58,10;UBERON:0002619,6.73e-41,17;UBERON:0000956,3.10e-39,21;UBERON:0001869,3.10e-39,21;UBERON:0000203,3.10e-39,21;UBERON:0003528,4.59e-28,29;UBERON:0002791,4.59e-28,29;UBERON:0001893,4.59e-28,29;UBERON:0002020,9.61e-24,34;UBERON:0002780,1.58e-20,39;UBERON:0001890,1.58e-20,39;UBERON:0006240,1.58e-20,39;UBERON:0000955,5.59e-20,47;UBERON:0006238,5.59e-20,47;UBERON:0003080,5.59e-20,40;UBERON:0001049,1.01e-17,52;UBERON:0005068,1.01e-17,52;UBERON:0006241,1.01e-17,52;UBERON:0007135,1.01e-17,52;UBERON:0002616,3.43e-17,46;UBERON:0000073,5.37e-17,54;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0003056,4.72e-16,49;UBERON:0002346,4.10e-14,64;UBERON:0003075,4.10e-14,64;UBERON:0007284,4.10e-14,64;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0010371,3.52e-12,73;UBERON:0010314,2.50e-09,92;UBERON:0000025,3.37e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,1.0752457327937,0,0,0,0.279182999001381,0,0.45839474333043,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0.915001205637253,0,3.65031072403781,0.767146371990992,0.41557608911912,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0,7.71171159412337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,3.22227665555024,2.29158205375759,2.57779773515531,2.74033007908257,6.0431511791176,4.72515750162264,4.5032120322422,7.25027854374727,4.65984280576638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Ano3}} | ||
|EntrezGene=228432 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=A2AHL1 | |||
|association_with_transcript=18bp_to_ENSMUST00000111019_5end | |||
|description=CAGE_peak_4_at_Ano3_5end | |||
|id=chr2:110790499..110790510,- | |||
|ontology_enrichment_celltype=CL:0000107!6.27e-10!9;CL:0000393!5.14e-08!39;CL:0000211!5.14e-08!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.16e-24!75;UBERON:0001016!5.16e-24!75;UBERON:0001017!2.60e-23!73;UBERON:0005743!2.60e-23!73;UBERON:0002021!2.78e-22!10;UBERON:0000411!2.78e-22!10;UBERON:0001950!2.78e-22!10;UBERON:0000955!6.25e-20!50;UBERON:0006238!6.25e-20!50;UBERON:0002616!2.19e-18!49;UBERON:0004121!6.74e-18!102;UBERON:0000924!6.74e-18!102;UBERON:0006601!6.74e-18!102;UBERON:0000033!2.77e-17!63;UBERON:0001049!2.41e-15!52;UBERON:0005068!2.41e-15!52;UBERON:0006241!2.41e-15!52;UBERON:0007135!2.41e-15!52;UBERON:0002619!9.64e-15!17;UBERON:0002791!2.23e-14!29;UBERON:0003528!2.23e-14!29;UBERON:0001893!2.23e-14!29;UBERON:0003080!7.05e-14!40;UBERON:0000956!9.58e-14!21;UBERON:0001869!9.58e-14!21;UBERON:0000203!9.58e-14!21;UBERON:0002346!3.78e-13!71;UBERON:0003075!3.78e-13!71;UBERON:0007284!3.78e-13!71;UBERON:0002780!9.55e-13!39;UBERON:0001890!9.55e-13!39;UBERON:0006240!9.55e-13!39;UBERON:0003056!9.36e-12!49;UBERON:0002020!1.07e-11!34;UBERON:0007811!6.70e-11!86;UBERON:0000010!4.33e-10!11;UBERON:0002410!6.27e-10!9;UBERON:0000153!2.00e-09!94;UBERON:0002298!3.16e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.09e-58,10;UBERON:0000411,3.09e-58,10;UBERON:0001950,3.09e-58,10;UBERON:0002619,6.73e-41,17;UBERON:0000956,3.10e-39,21;UBERON:0001869,3.10e-39,21;UBERON:0000203,3.10e-39,21;UBERON:0003528,4.59e-28,29;UBERON:0002791,4.59e-28,29;UBERON:0001893,4.59e-28,29;UBERON:0002020,9.61e-24,34;UBERON:0002780,1.58e-20,39;UBERON:0001890,1.58e-20,39;UBERON:0006240,1.58e-20,39;UBERON:0000955,5.59e-20,47;UBERON:0006238,5.59e-20,47;UBERON:0003080,5.59e-20,40;UBERON:0001049,1.01e-17,52;UBERON:0005068,1.01e-17,52;UBERON:0006241,1.01e-17,52;UBERON:0007135,1.01e-17,52;UBERON:0002616,3.43e-17,46;UBERON:0000073,5.37e-17,54;UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0003056,4.72e-16,49;UBERON:0002346,4.10e-14,64;UBERON:0003075,4.10e-14,64;UBERON:0007284,4.10e-14,64;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0010371,3.52e-12,73;UBERON:0010314,2.50e-09,92;UBERON:0000025,3.37e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,1.0752457327937,0,0,0,0.279182999001381,0,0.45839474333043,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0.915001205637253,0,3.65031072403781,0.767146371990992,0.41557608911912,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0,7.71171159412337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,3.22227665555024,2.29158205375759,2.57779773515531,2.74033007908257,6.0431511791176,4.72515750162264,4.5032120322422,7.25027854374727,4.65984280576638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Ano3 | |||
}} |
Revision as of 21:35, 13 September 2013
Short description: | p4@Ano3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ano3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 18bp_to_ENSMUST00000111019_5end |
EntrezGene: | Ano3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.09e-58 | 10 |
visual cortex | 3.09e-58 | 10 |
neocortex | 3.09e-58 | 10 |
regional part of cerebral cortex | 6.73e-41 | 17 |
cerebral cortex | 3.10e-39 | 21 |
cerebral hemisphere | 3.10e-39 | 21 |
pallium | 3.10e-39 | 21 |
brain grey matter | 4.59e-28 | 29 |
regional part of telencephalon | 4.59e-28 | 29 |
telencephalon | 4.59e-28 | 29 |
gray matter | 9.61e-24 | 34 |
regional part of forebrain | 1.58e-20 | 39 |
forebrain | 1.58e-20 | 39 |
future forebrain | 1.58e-20 | 39 |
brain | 5.59e-20 | 47 |
future brain | 5.59e-20 | 47 |
anterior neural tube | 5.59e-20 | 40 |
neural tube | 1.01e-17 | 52 |
neural rod | 1.01e-17 | 52 |
future spinal cord | 1.01e-17 | 52 |
neural keel | 1.01e-17 | 52 |
regional part of brain | 3.43e-17 | 46 |
regional part of nervous system | 5.37e-17 | 54 |
central nervous system | 1.17e-16 | 73 |
nervous system | 3.58e-16 | 75 |
pre-chordal neural plate | 4.72e-16 | 49 |
neurectoderm | 4.10e-14 | 64 |
neural plate | 4.10e-14 | 64 |
presumptive neural plate | 4.10e-14 | 64 |
ectoderm-derived structure | 2.01e-12 | 95 |
ectoderm | 2.01e-12 | 95 |
presumptive ectoderm | 2.01e-12 | 95 |
ecto-epithelium | 3.52e-12 | 73 |
structure with developmental contribution from neural crest | 2.50e-09 | 92 |
tube | 3.37e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.