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FFCP PHASE1:Mm9::chr9:110782825..110782850,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=235633|HGNC=|MCL_coexpression_id=40|UniProt=Q60I26|association_with_transcript=0bp_to_ENSMUST00000155014,NM_001146060,uc009rvf.2_5end|description=CAGE_peak_3_at_Als2cl_5end|id=chr9:110782825..110782850,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,2.82e-11,9;CL:0000789,2.82e-11,9;CL:0002420,2.82e-11,9;CL:0002419,2.82e-11,9;CL:0000790,2.82e-11,9;CL:0000624,1.90e-09,8;CL:0000084,5.67e-09,11;CL:0000827,5.67e-09,11;CL:0000838,4.13e-08,12;CL:0002031,1.65e-07,25;CL:0000542,2.21e-07,13;CL:0000051,2.21e-07,13;CL:0000068,3.53e-07,3;CL:0002202,3.53e-07,3;CL:0000069,3.53e-07,3;CL:0002632,3.53e-07,3;CL:0002368,3.53e-07,3;CL:0000307,3.53e-07,3;CL:0000377,3.53e-07,3;CL:0000738,6.31e-07,17;CL:0002087,6.31e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.15e-14!130;UBERON:0000925!5.15e-14!130;UBERON:0006595!5.15e-14!130;UBERON:0001007!7.52e-14!128;UBERON:0001555!7.52e-14!128;UBERON:0007026!7.52e-14!128;UBERON:0004921!1.26e-13!126;UBERON:0004185!1.26e-13!126;UBERON:0000077!1.21e-11!97;UBERON:0001041!5.21e-11!92;UBERON:0001004!6.66e-10!42;UBERON:0000065!1.86e-09!41;UBERON:0003104!4.19e-07!131;UBERON:0009142!4.19e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0005178,4.75e-14,17;UBERON:0005181,4.75e-14,17;UBERON:0002224,4.75e-14,17;UBERON:0000915,4.75e-14,17;UBERON:0008947,4.75e-14,17;UBERON:0003258,4.75e-14,17;UBERON:0001004,9.39e-14,42;UBERON:0000065,8.99e-13,41;UBERON:0004921,3.57e-10,114;UBERON:0001007,7.37e-10,116;UBERON:0001555,7.37e-10,116;UBERON:0007026,7.37e-10,116;UBERON:0004119,1.48e-09,118;UBERON:0000925,1.48e-09,118;UBERON:0006595,1.48e-09,118;UBERON:0002048,2.57e-09,14;UBERON:0000117,2.57e-09,14;UBERON:0000171,2.57e-09,14;UBERON:0000170,2.57e-09,14;UBERON:0005597,2.57e-09,14;UBERON:0000118,2.57e-09,14;UBERON:0001041,6.10e-08,80;UBERON:0005153,2.34e-07,17;UBERON:0003126,3.53e-07,3;UBERON:0001005,3.53e-07,3;UBERON:0007196,3.53e-07,3;UBERON:0001558,3.53e-07,3|phase1_expression=0.480446541314382,0,0,0.90739263392049,0.500895729946347,0.33575854382378,0.467225281191051,3.74457637980571,3.23814060948833,2.57470978954193,0.34243593645101,0.638177271962691,32.6993394168603,14.9488888136486,0,0,0,1.10411757875383,1.37114433605739,1.27316895539409,0.850432901510698,0,0,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0,0,0.665191531965914,0,0,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,14.5072428402269,14.7881271622684,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,3.07374644257244,0,0,0,0.856952953211411,0.441737081903227,0,0,0,1.10115880999389,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0,0,0,3.18850937571846,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0,0,0,0,0.281686839553361,0,0,0,4.11332977921307,3.04031838570118,5.05524445014783,0.34255163915718,2.33044095282455,0.29688427812965,0,0,0.461230994512117,0,0.470354828542819,0.376999773989026,2.47194967734374,0.433798070759735,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.203678727700633,0.373220911830279,0.505445516867349,0.841767423545896,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0,0.219550115291051,0.268412837520744,0.210289948564127,0,1.32167513193519,0,0,0,0.128867461322093,1.21010114774006,0.889512175379481,1.14135375667535,0.474529061544512,1.15289268306808,2.26201687920243,2.98434708061726,2.53453313254856,0,0.432276099749388,0.398282546508734,0,0.228497025219458,0,0,0,0.420814919341911,0.632365371242573,1.03327103585722,0.784993639206874,0.740382983530803,0,0,0,0.674586337154561,0,0,0,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,0,0.505157755894224,0.717589654087649,0,3.8798169934987,0,0.162964976442026,0,1.64283173801951,2.34508760418542,0.952174563544055,2.14647012643579,1.26108115284953,1.99318220683897,1.43509291791738,1.63863314715738,0.518054945597687,3.18227928879325,0,0.54390568381871,0.983528546038072,0.275936746304732,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.81443479676788,0.989820737835213,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,0,0.316036757935816,0,2.06271086496374,1.70219802876894,0,0.129358683782755,0,0.177340233642274,0.713475270408282,0.493647061806363,0.608929898229199,0.23467170806371,0.42366414172764,0,0.32977250588296,0.645857706783622,0.120625849856312,0.119372344003136,0.492422699235184,0.291480836629851,0.741701208042039,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,0.820165366326151,0.915112692826091,0.169978429993855,0.419854356970974,0.414599921413271,0.954670618015114,0.158167996790568,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.539457385539283,0.991841468704031,0.785267825952089,1.8146096260851,1.24267862617385,0.56369293868419,0,0,0,0.387479470433193,0,0.58678619322877,0.13020438484395,0.629156066554265,0.241584120826006,0.288030006257865,3.16011120628178,0.405450430580328,0.308132871494482,0.649604114888975,0,0.39736270956253,0.961563596159751,0.590758108698309,0.302899349844443,0.533447646584999,0.201652370273681,1.46186821109629,0.962118416403295,1.28564592399726,0.680191150845634,0,0,0,2.51146472241848,0.375364950902364,2.74727436400898,2.14368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0,0.377252682772152,0.37456602987953,0.384150914429216,0.287177344778066,1.42888107384922,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.0941093804153306,0.423073039458382,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.394017929502254,0,0,0.385813221962283,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0.220591419119515,0|short_description=p3@Als2cl}}
|EntrezGene=235633
|HGNC=
|MCL_coexpression_id=40
|UniProt=Q60I26
|association_with_transcript=0bp_to_ENSMUST00000155014,NM_001146060,uc009rvf.2_5end
|description=CAGE_peak_3_at_Als2cl_5end
|id=chr9:110782825..110782850,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,2.82e-11,9;CL:0000789,2.82e-11,9;CL:0002420,2.82e-11,9;CL:0002419,2.82e-11,9;CL:0000790,2.82e-11,9;CL:0000624,1.90e-09,8;CL:0000084,5.67e-09,11;CL:0000827,5.67e-09,11;CL:0000838,4.13e-08,12;CL:0002031,1.65e-07,25;CL:0000542,2.21e-07,13;CL:0000051,2.21e-07,13;CL:0000068,3.53e-07,3;CL:0002202,3.53e-07,3;CL:0000069,3.53e-07,3;CL:0002632,3.53e-07,3;CL:0002368,3.53e-07,3;CL:0000307,3.53e-07,3;CL:0000377,3.53e-07,3;CL:0000738,6.31e-07,17;CL:0002087,6.31e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!5.15e-14!130;UBERON:0000925!5.15e-14!130;UBERON:0006595!5.15e-14!130;UBERON:0001007!7.52e-14!128;UBERON:0001555!7.52e-14!128;UBERON:0007026!7.52e-14!128;UBERON:0004921!1.26e-13!126;UBERON:0004185!1.26e-13!126;UBERON:0000077!1.21e-11!97;UBERON:0001041!5.21e-11!92;UBERON:0001004!6.66e-10!42;UBERON:0000065!1.86e-09!41;UBERON:0003104!4.19e-07!131;UBERON:0009142!4.19e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0005178,4.75e-14,17;UBERON:0005181,4.75e-14,17;UBERON:0002224,4.75e-14,17;UBERON:0000915,4.75e-14,17;UBERON:0008947,4.75e-14,17;UBERON:0003258,4.75e-14,17;UBERON:0001004,9.39e-14,42;UBERON:0000065,8.99e-13,41;UBERON:0004921,3.57e-10,114;UBERON:0001007,7.37e-10,116;UBERON:0001555,7.37e-10,116;UBERON:0007026,7.37e-10,116;UBERON:0004119,1.48e-09,118;UBERON:0000925,1.48e-09,118;UBERON:0006595,1.48e-09,118;UBERON:0002048,2.57e-09,14;UBERON:0000117,2.57e-09,14;UBERON:0000171,2.57e-09,14;UBERON:0000170,2.57e-09,14;UBERON:0005597,2.57e-09,14;UBERON:0000118,2.57e-09,14;UBERON:0001041,6.10e-08,80;UBERON:0005153,2.34e-07,17;UBERON:0003126,3.53e-07,3;UBERON:0001005,3.53e-07,3;UBERON:0007196,3.53e-07,3;UBERON:0001558,3.53e-07,3
|phase1_expression=0.480446541314382,0,0,0.90739263392049,0.500895729946347,0.33575854382378,0.467225281191051,3.74457637980571,3.23814060948833,2.57470978954193,0.34243593645101,0.638177271962691,32.6993394168603,14.9488888136486,0,0,0,1.10411757875383,1.37114433605739,1.27316895539409,0.850432901510698,0,0,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0,0,0.665191531965914,0,0,0,0.577703239502549,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,14.5072428402269,14.7881271622684,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,3.07374644257244,0,0,0,0.856952953211411,0.441737081903227,0,0,0,1.10115880999389,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0,0,0,3.18850937571846,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0,0,0,0,0.281686839553361,0,0,0,4.11332977921307,3.04031838570118,5.05524445014783,0.34255163915718,2.33044095282455,0.29688427812965,0,0,0.461230994512117,0,0.470354828542819,0.376999773989026,2.47194967734374,0.433798070759735,0,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.203678727700633,0.373220911830279,0.505445516867349,0.841767423545896,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0,0.219550115291051,0.268412837520744,0.210289948564127,0,1.32167513193519,0,0,0,0.128867461322093,1.21010114774006,0.889512175379481,1.14135375667535,0.474529061544512,1.15289268306808,2.26201687920243,2.98434708061726,2.53453313254856,0,0.432276099749388,0.398282546508734,0,0.228497025219458,0,0,0,0.420814919341911,0.632365371242573,1.03327103585722,0.784993639206874,0.740382983530803,0,0,0,0.674586337154561,0,0,0,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,1.11642284300551,0,0.505157755894224,0.717589654087649,0,3.8798169934987,0,0.162964976442026,0,1.64283173801951,2.34508760418542,0.952174563544055,2.14647012643579,1.26108115284953,1.99318220683897,1.43509291791738,1.63863314715738,0.518054945597687,3.18227928879325,0,0.54390568381871,0.983528546038072,0.275936746304732,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.81443479676788,0.989820737835213,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,0,0.316036757935816,0,2.06271086496374,1.70219802876894,0,0.129358683782755,0,0.177340233642274,0.713475270408282,0.493647061806363,0.608929898229199,0.23467170806371,0.42366414172764,0,0.32977250588296,0.645857706783622,0.120625849856312,0.119372344003136,0.492422699235184,0.291480836629851,0.741701208042039,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,0.820165366326151,0.915112692826091,0.169978429993855,0.419854356970974,0.414599921413271,0.954670618015114,0.158167996790568,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.539457385539283,0.991841468704031,0.785267825952089,1.8146096260851,1.24267862617385,0.56369293868419,0,0,0,0.387479470433193,0,0.58678619322877,0.13020438484395,0.629156066554265,0.241584120826006,0.288030006257865,3.16011120628178,0.405450430580328,0.308132871494482,0.649604114888975,0,0.39736270956253,0.961563596159751,0.590758108698309,0.302899349844443,0.533447646584999,0.201652370273681,1.46186821109629,0.962118416403295,1.28564592399726,0.680191150845634,0,0,0,2.51146472241848,0.375364950902364,2.74727436400898,2.14368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0,0.377252682772152,0.37456602987953,0.384150914429216,0.287177344778066,1.42888107384922,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.0941093804153306,0.423073039458382,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.394017929502254,0,0,0.385813221962283,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0.220591419119515,0
|short_description=p3@Als2cl
}}

Revision as of 16:58, 14 September 2013

Short description:p3@Als2cl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Als2cl_5end
Coexpression cluster:MCL_coexpression_mm9:40
Association with transcript: 0bp_to_ENSMUST00000155014, NM_001146060, uc009rvf.2_5end
EntrezGene:Als2cl
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Als2cl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E432.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.95
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I914.51
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.79
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element4.75e-1417
thoracic segment organ4.75e-1417
thoracic cavity4.75e-1417
thoracic segment of trunk4.75e-1417
respiratory primordium4.75e-1417
endoderm of foregut4.75e-1417
respiratory system9.39e-1442
respiratory tract8.99e-1341
subdivision of digestive tract3.57e-10114
digestive system7.37e-10116
digestive tract7.37e-10116
primitive gut7.37e-10116
endoderm-derived structure1.48e-09118
endoderm1.48e-09118
presumptive endoderm1.48e-09118
lung2.57e-0914
respiratory tube2.57e-0914
respiration organ2.57e-0914
pair of lungs2.57e-0914
lung primordium2.57e-0914
lung bud2.57e-0914
foregut6.10e-0880
epithelial bud2.34e-0717
trachea3.53e-073
respiratory airway3.53e-073
tracheobronchial tree3.53e-073
lower respiratory tract3.53e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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