FFCP PHASE1:Hg19::chr10:30725492..30725508,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-6bp_to_ENST00000517117_5end|coexpression_cluster_id=C107|description=CAGE_peak_1_at_ENST00000517117_5end|id=chr10:30725492..30725508,+|ontology_enrichment_celltype=CL:0000738!2.15e-37!140;CL:0002057!5.02e-36!42;CL:0000860!1.75e-32!45;CL:0000766!1.08e-30!76;CL:0000037!4.33e-28!172;CL:0000566!4.33e-28!172;CL:0002031!8.73e-27!124;CL:0002032!1.30e-26!165;CL:0000837!1.30e-26!165;CL:0000988!1.43e-26!182;CL:0002087!9.32e-26!119;CL:0000557!6.10e-25!71;CL:0002009!9.14e-24!65;CL:0000839!1.28e-22!70;CL:0002194!5.11e-22!63;CL:0000576!5.11e-22!63;CL:0000040!5.11e-22!63;CL:0000559!5.11e-22!63;CL:0000763!1.17e-21!112;CL:0000049!1.17e-21!112;CL:0000134!6.82e-14!358;CL:0002320!6.17e-13!365;CL:0000219!4.85e-12!390;CL:0000094!2.93e-09!8;CL:0000048!1.30e-07!430;CL:0000723!4.41e-07!436;CL:0000034!5.35e-07!444|ontology_enrichment_celltype_v019=CL:0000860;5.81e-73;33!CL:0002057;5.81e-73;33!CL:0000473;3.25e-54;39!CL:0000234;3.25e-54;39!CL:0000576;2.59e-39;48!CL:0000766;4.78e-33;69!CL:0000775;6.17e-17;3!CL:0000094;1.59e-16;8!CL:0000763;9.91e-15;100!CL:0002087;1.27e-13;104!CL:0000081;5.96e-12;11!CL:0000771;2.17e-11;2!CL:0001014;4.15e-11;2!CL:0001016;4.15e-11;2!CL:0000738;9.02e-11;136!CL:0000453;1.33e-09;5!CL:0000219;2.43e-07;193|ontology_enrichment_celltype_v019_2=CL:0000860,1.18e-72,42;CL:0002057,1.18e-72,42;CL:0000473,4.38e-68,48;CL:0000234,4.38e-68,48;CL:0000766,6.91e-63,72;CL:0002009,4.59e-60,61;CL:0000557,3.07e-54,67;CL:0002194,2.45e-53,59;CL:0000576,2.45e-53,59;CL:0000040,2.45e-53,59;CL:0000559,2.45e-53,59;CL:0000763,6.87e-49,108;CL:0000049,6.87e-49,108;CL:0000839,3.59e-47,66;CL:0000738,2.81e-45,136;CL:0000037,2.06e-35,168;CL:0002032,5.75e-35,161;CL:0000837,5.75e-35,161;CL:0000988,2.83e-33,177;CL:0002031,1.97e-32,120;CL:0002087,1.29e-31,115;CL:0000775,5.55e-17,3;CL:0000094,1.23e-16,8;CL:0000134,3.50e-13,354;CL:0002320,8.67e-13,361;CL:0000081,4.96e-12,11;CL:0000771,1.58e-11,2;CL:0000219,2.12e-11,386;CL:0001014,4.49e-11,2;CL:0001016,4.49e-11,2;CL:0000048,1.06e-09,427;CL:0000453,1.58e-09,5;CL:0000723,1.82e-09,433;CL:0000034,3.66e-09,441|ontology_enrichment_development_v019=CL:0002057;7.58e-54;42!CL:0000049;7.61e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.95e-23!80;UBERON:0002390!8.59e-23!102;UBERON:0003061!8.59e-23!102;UBERON:0002193!1.62e-20!112;UBERON:0001474!1.75e-20!86;UBERON:0002405!8.45e-18!115;UBERON:0004765!1.21e-15!101;UBERON:0001434!1.21e-15!101;UBERON:0002384!1.18e-11!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.35e-47,76;UBERON:0001474,2.34e-43,82;UBERON:0004765,5.11e-39,90;UBERON:0002390,3.41e-38,98;UBERON:0003061,3.41e-38,98;UBERON:0002405,1.40e-37,93;UBERON:0001434,1.47e-34,100;UBERON:0002193,3.99e-34,108;UBERON:0002204,2.27e-18,167;UBERON:0003081,2.35e-15,203;UBERON:0002384,2.99e-12,371;UBERON:0000926,9.80e-08,315;UBERON:0004120,9.80e-08,315;UBERON:0006603,9.80e-08,315|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0.710846162437108,0.293600439334847,1.10799081706375,0.601633342410425,1.51907609501096,0,0,0,0.726991193897824,0.755751887377619,0,0.929716147622738,1.23350366406548,1.85823822537062,4.02769349251011,2.30544635876191,5.20260905754887,9.3081333798887,4.51839278508678,4.06279459783025,3.38836211176688,0.818718450173537,3.14612878223118,18.3650335422542,12.8371610830437,12.1474053901818,0.989553900560148,1.99463657621632,0.426224750532694,9.86711411337186,4.53908179752912,4.35975574296902,2.26123798731069,4.17186334736161,3.25783267057675,4.23779651843358,3.31449872388808,6.32924774881769,0.211255286311942,0.425208599930087,0.209658645508376,0.44931452458598,0.600707571366025,0,0.570025487482497,0.39783335439818,0,0,0,0,0.853460445133014,0.400395987036012,0.574752439954483,0,0,0.569212969109448,1.76171156811282,0.764546456250458,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0.579606171470105,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,0.534880391567015,0.289648807765598,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0.757301322732344,0,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENST00000517117_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_1_at_ENST00000517117_5end | |||
|id=chr10:30725492..30725508,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.15e-37!140;CL:0002057!5.02e-36!42;CL:0000860!1.75e-32!45;CL:0000766!1.08e-30!76;CL:0000037!4.33e-28!172;CL:0000566!4.33e-28!172;CL:0002031!8.73e-27!124;CL:0002032!1.30e-26!165;CL:0000837!1.30e-26!165;CL:0000988!1.43e-26!182;CL:0002087!9.32e-26!119;CL:0000557!6.10e-25!71;CL:0002009!9.14e-24!65;CL:0000839!1.28e-22!70;CL:0002194!5.11e-22!63;CL:0000576!5.11e-22!63;CL:0000040!5.11e-22!63;CL:0000559!5.11e-22!63;CL:0000763!1.17e-21!112;CL:0000049!1.17e-21!112;CL:0000134!6.82e-14!358;CL:0002320!6.17e-13!365;CL:0000219!4.85e-12!390;CL:0000094!2.93e-09!8;CL:0000048!1.30e-07!430;CL:0000723!4.41e-07!436;CL:0000034!5.35e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.81e-73;33!CL:0002057;5.81e-73;33!CL:0000473;3.25e-54;39!CL:0000234;3.25e-54;39!CL:0000576;2.59e-39;48!CL:0000766;4.78e-33;69!CL:0000775;6.17e-17;3!CL:0000094;1.59e-16;8!CL:0000763;9.91e-15;100!CL:0002087;1.27e-13;104!CL:0000081;5.96e-12;11!CL:0000771;2.17e-11;2!CL:0001014;4.15e-11;2!CL:0001016;4.15e-11;2!CL:0000738;9.02e-11;136!CL:0000453;1.33e-09;5!CL:0000219;2.43e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.18e-72,42;CL:0002057,1.18e-72,42;CL:0000473,4.38e-68,48;CL:0000234,4.38e-68,48;CL:0000766,6.91e-63,72;CL:0002009,4.59e-60,61;CL:0000557,3.07e-54,67;CL:0002194,2.45e-53,59;CL:0000576,2.45e-53,59;CL:0000040,2.45e-53,59;CL:0000559,2.45e-53,59;CL:0000763,6.87e-49,108;CL:0000049,6.87e-49,108;CL:0000839,3.59e-47,66;CL:0000738,2.81e-45,136;CL:0000037,2.06e-35,168;CL:0002032,5.75e-35,161;CL:0000837,5.75e-35,161;CL:0000988,2.83e-33,177;CL:0002031,1.97e-32,120;CL:0002087,1.29e-31,115;CL:0000775,5.55e-17,3;CL:0000094,1.23e-16,8;CL:0000134,3.50e-13,354;CL:0002320,8.67e-13,361;CL:0000081,4.96e-12,11;CL:0000771,1.58e-11,2;CL:0000219,2.12e-11,386;CL:0001014,4.49e-11,2;CL:0001016,4.49e-11,2;CL:0000048,1.06e-09,427;CL:0000453,1.58e-09,5;CL:0000723,1.82e-09,433;CL:0000034,3.66e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.58e-54;42!CL:0000049;7.61e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.95e-23!80;UBERON:0002390!8.59e-23!102;UBERON:0003061!8.59e-23!102;UBERON:0002193!1.62e-20!112;UBERON:0001474!1.75e-20!86;UBERON:0002405!8.45e-18!115;UBERON:0004765!1.21e-15!101;UBERON:0001434!1.21e-15!101;UBERON:0002384!1.18e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.35e-47,76;UBERON:0001474,2.34e-43,82;UBERON:0004765,5.11e-39,90;UBERON:0002390,3.41e-38,98;UBERON:0003061,3.41e-38,98;UBERON:0002405,1.40e-37,93;UBERON:0001434,1.47e-34,100;UBERON:0002193,3.99e-34,108;UBERON:0002204,2.27e-18,167;UBERON:0003081,2.35e-15,203;UBERON:0002384,2.99e-12,371;UBERON:0000926,9.80e-08,315;UBERON:0004120,9.80e-08,315;UBERON:0006603,9.80e-08,315 | |||
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| |||
|short_description=p1@ENST00000517117 | |||
}} |
Revision as of 13:06, 10 September 2013
Short description: | p1@ENST00000517117 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000517117_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -6bp_to_ENST00000517117_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.35e-47 | 76 |
bone element | 2.34e-43 | 82 |
skeletal element | 5.11e-39 | 90 |
hematopoietic system | 3.41e-38 | 98 |
blood island | 3.41e-38 | 98 |
immune system | 1.40e-37 | 93 |
skeletal system | 1.47e-34 | 100 |
hemolymphoid system | 3.99e-34 | 108 |
musculoskeletal system | 2.27e-18 | 167 |
lateral plate mesoderm | 2.35e-15 | 203 |
connective tissue | 2.99e-12 | 371 |
mesoderm | 9.80e-08 | 315 |
mesoderm-derived structure | 9.80e-08 | 315 |
presumptive mesoderm | 9.80e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.