FFCP PHASE1:Hg19::chr11:65192904..65192915,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283131|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=30815|TSSclassifier=N|UniProt=|association_with_transcript=387bp_to_AF001893_5end|coexpression_cluster_id=C2|description=CAGE_peak_4_at_NEAT1_5end|id=chr11:65192904..65192915,+|ontology_enrichment_celltype=CL:0000738!2.07e-42!140;CL:0002031!1.81e-36!124;CL:0002087!2.39e-34!119;CL:0000037!4.97e-33!172;CL:0000566!4.97e-33!172;CL:0002032!8.00e-32!165;CL:0000837!8.00e-32!165;CL:0000988!1.27e-29!182;CL:0000766!9.24e-24!76;CL:0002057!5.20e-20!42;CL:0000839!1.94e-19!70;CL:0000860!5.35e-19!45;CL:0000557!6.20e-19!71;CL:0002009!1.76e-18!65;CL:0002194!1.65e-17!63;CL:0000576!1.65e-17!63;CL:0000040!1.65e-17!63;CL:0000559!1.65e-17!63;CL:0000763!1.00e-16!112;CL:0000049!1.00e-16!112;CL:0000838!2.04e-15!52;CL:0000542!9.44e-15!53;CL:0000051!9.44e-15!53;CL:0000791!6.93e-13!18;CL:0000789!6.93e-13!18;CL:0002420!6.93e-13!18;CL:0002419!6.93e-13!18;CL:0000790!6.93e-13!18;CL:0000084!3.83e-10!25;CL:0000827!3.83e-10!25;CL:0000625!1.57e-08!11;CL:0000094!2.80e-07!8|ontology_enrichment_celltype_v019=CL:0000791;6.47e-28;18!CL:0000789;6.47e-28;18!CL:0002419;6.47e-28;18!CL:0000860;3.31e-20;33!CL:0002057;3.31e-20;33!CL:0000625;1.02e-18;11!CL:0000084;1.22e-18;25!CL:0002087;3.95e-16;104!CL:0000473;1.03e-15;39!CL:0000234;1.03e-15;39!CL:0000094;1.23e-15;8!CL:0000542;1.03e-14;53!CL:0000576;1.34e-13;48!CL:0000766;5.49e-13;69!CL:0000624;7.96e-13;6!CL:0000236;1.09e-11;13!CL:0000738;5.23e-11;136!CL:0000081;7.07e-11;11!CL:0000623;2.70e-07;3!CL:0000898;3.95e-07;3!CL:0000763;5.93e-07;100!CL:0000775;6.22e-07;3!CL:0000988;9.49e-07;177|ontology_enrichment_celltype_v019_2=CL:0000738,1.05e-54,136;CL:0002087,1.30e-43,115;CL:0002031,2.08e-42,120;CL:0000037,1.07e-41,168;CL:0002032,7.41e-40,161;CL:0000837,7.41e-40,161;CL:0000988,1.60e-38,177;CL:0000791,5.15e-28,18;CL:0000789,5.15e-28,18;CL:0002420,5.15e-28,18;CL:0002419,5.15e-28,18;CL:0000790,5.15e-28,18;CL:0000766,2.64e-27,72;CL:0000838,5.46e-25,52;CL:0000542,2.43e-24,53;CL:0000051,2.43e-24,53;CL:0000860,5.02e-22,42;CL:0002057,5.02e-22,42;CL:0000473,4.63e-20,48;CL:0000234,4.63e-20,48;CL:0000625,7.93e-19,11;CL:0000084,1.04e-18,25;CL:0000827,1.04e-18,25;CL:0000557,7.10e-18,67;CL:0000839,7.79e-17,66;CL:0000763,1.32e-16,108;CL:0000049,1.32e-16,108;CL:0002009,2.13e-16,61;CL:0002194,9.39e-16,59;CL:0000576,9.39e-16,59;CL:0000040,9.39e-16,59;CL:0000559,9.39e-16,59;CL:0000094,9.80e-16,8;CL:0000624,8.07e-13,6;CL:0000081,6.04e-11,11;CL:0000236,7.53e-11,14;CL:0000134,1.56e-10,354;CL:0002320,5.65e-10,361;CL:0000219,4.81e-08,386;CL:0000623,2.65e-07,3;CL:0000825,2.65e-07,3;CL:0000898,4.04e-07,3;CL:0000775,5.43e-07,3|ontology_enrichment_development_v019=CL:0000790;6.47e-28;18!CL:0002057;4.69e-16;42!CL:0000051;1.03e-14;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.76e-23!102;UBERON:0003061!1.76e-23!102;UBERON:0002193!1.81e-21!112;UBERON:0002371!2.69e-15!80;UBERON:0001474!6.39e-13!86;UBERON:0002405!5.87e-12!115;UBERON:0000178!1.59e-08!15;UBERON:0000179!1.59e-08!15;UBERON:0000463!1.59e-08!15;UBERON:0004765!3.64e-08!101;UBERON:0001434!3.64e-08!101;UBERON:0007023!6.48e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;4.70e-16;15!UBERON:0000179;4.70e-16;15!UBERON:0000463;4.70e-16;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-24,98;UBERON:0003061,1.02e-24,98;UBERON:0002193,3.01e-21,108;UBERON:0000178,4.25e-16,15;UBERON:0000179,4.25e-16,15;UBERON:0000463,4.25e-16,15;UBERON:0002371,9.77e-15,76;UBERON:0001474,4.84e-13,82;UBERON:0002405,1.52e-11,93;UBERON:0004765,3.76e-11,90;UBERON:0001434,3.04e-09,100;UBERON:0002384,3.21e-09,371;UBERON:0003081,1.68e-07,203|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0.0821005894499457,0.393553906568396,5.50709987588466,6.52509976765262,2.78669021968937,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,6.09394949385065,5.01361118675354,5.4252717678963,0.447830948479849,1.6194683300949,0.257575567634187,0.872389432677388,0.755751887377619,2.42584061187816,0.929716147622738,0,3.40677007984614,2.01384674625505,0.512321413058201,3.07426898855161,7.23965929546899,3.22742341791913,5.41705946377367,2.82363509313907,1.09162460023138,2.24723484445085,6.73384563215986,4.8139354061414,5.75403413219137,1.31940520074686,0.997318288108159,2.98357325372886,4.35313857942876,0.56738522469114,0,3.51748131359441,2.60741459210101,3.47502151528187,3.02699751316684,3.68277635987565,6.32924774881769,0.845021145247767,0.425208599930087,0.419317291016752,1.12328631146495,0.901061357049038,0.964353520182481,0.570025487482497,0.59675003159727,0.365328307529268,1.75996244461323,1.09227722252426,8.89509253863555,0.853460445133014,1.60158394814405,2.87376219977242,1.98313461835459,3.81621501814146,5.12291672198504,2.93618594685469,6.11637165000366,2.64342657158052,4.484068503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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30815 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=387bp_to_AF001893_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_NEAT1_5end | |||
|id=chr11:65192904..65192915,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.07e-42!140;CL:0002031!1.81e-36!124;CL:0002087!2.39e-34!119;CL:0000037!4.97e-33!172;CL:0000566!4.97e-33!172;CL:0002032!8.00e-32!165;CL:0000837!8.00e-32!165;CL:0000988!1.27e-29!182;CL:0000766!9.24e-24!76;CL:0002057!5.20e-20!42;CL:0000839!1.94e-19!70;CL:0000860!5.35e-19!45;CL:0000557!6.20e-19!71;CL:0002009!1.76e-18!65;CL:0002194!1.65e-17!63;CL:0000576!1.65e-17!63;CL:0000040!1.65e-17!63;CL:0000559!1.65e-17!63;CL:0000763!1.00e-16!112;CL:0000049!1.00e-16!112;CL:0000838!2.04e-15!52;CL:0000542!9.44e-15!53;CL:0000051!9.44e-15!53;CL:0000791!6.93e-13!18;CL:0000789!6.93e-13!18;CL:0002420!6.93e-13!18;CL:0002419!6.93e-13!18;CL:0000790!6.93e-13!18;CL:0000084!3.83e-10!25;CL:0000827!3.83e-10!25;CL:0000625!1.57e-08!11;CL:0000094!2.80e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.47e-28;18!CL:0000789;6.47e-28;18!CL:0002419;6.47e-28;18!CL:0000860;3.31e-20;33!CL:0002057;3.31e-20;33!CL:0000625;1.02e-18;11!CL:0000084;1.22e-18;25!CL:0002087;3.95e-16;104!CL:0000473;1.03e-15;39!CL:0000234;1.03e-15;39!CL:0000094;1.23e-15;8!CL:0000542;1.03e-14;53!CL:0000576;1.34e-13;48!CL:0000766;5.49e-13;69!CL:0000624;7.96e-13;6!CL:0000236;1.09e-11;13!CL:0000738;5.23e-11;136!CL:0000081;7.07e-11;11!CL:0000623;2.70e-07;3!CL:0000898;3.95e-07;3!CL:0000763;5.93e-07;100!CL:0000775;6.22e-07;3!CL:0000988;9.49e-07;177 | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p4@NEAT1 | |||
}} |
Revision as of 18:55, 10 September 2013
Short description: | p4@NEAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NEAT1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 387bp_to_AF001893_5end |
EntrezGene: | NEAT1 |
HGNC: | 30815 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-24 | 98 |
blood island | 1.02e-24 | 98 |
hemolymphoid system | 3.01e-21 | 108 |
blood | 4.25e-16 | 15 |
haemolymphatic fluid | 4.25e-16 | 15 |
organism substance | 4.25e-16 | 15 |
bone marrow | 9.77e-15 | 76 |
bone element | 4.84e-13 | 82 |
immune system | 1.52e-11 | 93 |
skeletal element | 3.76e-11 | 90 |
skeletal system | 3.04e-09 | 100 |
connective tissue | 3.21e-09 | 371 |
lateral plate mesoderm | 1.68e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.