FFCP PHASE1:Hg19::chr11:68816311..68816323,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=219931|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20820|TSSclassifier=S|UniProt=A6NCB1,Q59G56,Q8NHX9|association_with_transcript=-26bp_to_ENST00000356782,NM_139075,uc001oor.2,uc001oos.2,uc009ysk.1,uc010rqg.1_5end|coexpression_cluster_id=C806|description=CAGE_peak_3_at_TPCN2_5end|id=chr11:68816311..68816323,+|ontology_enrichment_celltype=CL:0000839!4.21e-32!70;CL:0000557!2.13e-30!71;CL:0000766!3.84e-30!76;CL:0002194!9.13e-30!63;CL:0000576!9.13e-30!63;CL:0000040!9.13e-30!63;CL:0000559!9.13e-30!63;CL:0002009!2.46e-29!65;CL:0002057!1.56e-28!42;CL:0000860!1.08e-27!45;CL:0000763!7.67e-17!112;CL:0000049!7.67e-17!112;CL:0002031!2.73e-12!124;CL:0000738!1.44e-11!140;CL:0002087!4.01e-10!119;CL:0002032!4.71e-07!165;CL:0000837!4.71e-07!165;CL:0002393!5.17e-07!9;CL:0002397!5.17e-07!9;CL:0000037!5.46e-07!172;CL:0000566!5.46e-07!172|ontology_enrichment_celltype_v019=CL:0000860;4.14e-66;33!CL:0002057;4.14e-66;33!CL:0000473;2.54e-61;39!CL:0000234;2.54e-61;39!CL:0000576;1.52e-47;48!CL:0000766;8.00e-42;69!CL:0000763;3.32e-17;100!CL:0002393;3.20e-15;6!CL:0002397;3.20e-15;6!CL:0000148;3.60e-13;10!CL:0002087;3.45e-11;104!CL:0000738;1.52e-10;136!CL:0000235;3.32e-10;6!CL:0002567;1.99e-09;3!CL:0000147;4.67e-09;14|ontology_enrichment_celltype_v019_2=CL:0000473,1.25e-99,48;CL:0000234,1.25e-99,48;CL:0000860,2.24e-90,42;CL:0002057,2.24e-90,42;CL:0002009,1.92e-81,61;CL:0002194,8.99e-81,59;CL:0000576,8.99e-81,59;CL:0000040,8.99e-81,59;CL:0000559,8.99e-81,59;CL:0000766,9.68e-81,72;CL:0000557,1.91e-80,67;CL:0000839,2.82e-78,66;CL:0000763,8.12e-52,108;CL:0000049,8.12e-52,108;CL:0000738,4.02e-40,136;CL:0002031,2.19e-39,120;CL:0002087,1.94e-37,115;CL:0002032,2.23e-30,161;CL:0000837,2.23e-30,161;CL:0000037,6.59e-30,168;CL:0000988,1.06e-27,177;CL:0002393,1.25e-17,9;CL:0002397,1.25e-17,9;CL:0000219,1.44e-14,386;CL:0000148,2.76e-13,10;CL:0000541,2.76e-13,10;CL:0000134,1.36e-11,354;CL:0002320,4.28e-11,361;CL:0000235,2.12e-10,6;CL:0002567,1.56e-09,3;CL:0000147,3.89e-09,14;CL:0000048,2.85e-07,427;CL:0000034,4.09e-07,441;CL:0000723,5.47e-07,433|ontology_enrichment_development_v019=CL:0002057;1.00e-64;42!CL:0000049;5.10e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.64e-29!80;UBERON:0001474!6.22e-27!86;UBERON:0002390!2.20e-24!102;UBERON:0003061!2.20e-24!102;UBERON:0002193!1.83e-21!112;UBERON:0004765!7.97e-20!101;UBERON:0001434!7.97e-20!101;UBERON:0002405!4.17e-17!115;UBERON:0003081!1.43e-09!216;UBERON:0002204!3.29e-09!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.67e-72,76;UBERON:0001474,2.78e-66,82;UBERON:0002390,2.58e-63,98;UBERON:0003061,2.58e-63,98;UBERON:0004765,2.88e-59,90;UBERON:0002405,6.06e-57,93;UBERON:0002193,3.34e-56,108;UBERON:0001434,4.61e-52,100;UBERON:0002204,5.28e-26,167;UBERON:0003081,1.17e-24,203;UBERON:0000926,1.48e-12,315;UBERON:0004120,1.48e-12,315;UBERON:0006603,1.48e-12,315;UBERON:0002384,4.73e-11,371|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,0.446961094427288,0,2.53299878168311,0,0,0,0.697801167972428,0.218441372130172,0.527533956456907,0.37129905888014,0,0,0,0,0.487932798790507,0.738726348460727,0.408001382488506,0.940364164434263,0,0.136874425072884,0,0.229240217243854,0.328402357799783,0.236132343941038,1.18009283054671,0,0.77408061658038,0.919421224478927,0.30120591877825,0.739508020333575,0.154934401160603,0,0.293600439334847,4.9859586767869,1.20326668482085,2.17010870715852,0.671746422719773,0.32389366601898,0.77272670290256,1.89017710413434,2.26725566213286,1.4555043671269,3.48643555358527,6.16751832032739,5.57471467611186,2.3015391385772,3.84241059793651,4.02019790810595,3.10271112662957,2.5819387343353,6.77132432971709,3.20011977222428,4.09359225086769,3.14612878223118,4.28517449319264,4.49300637906531,2.55734850319616,2.30895910130701,2.59302754908121,0.852449501065388,3.77272010217159,6.24123747160254,2.4912889959823,3.01498398308092,1.5644487552606,3.25783267057675,2.42159801053347,4.78760926783834,2.53169909952708,1.26753171787165,2.76385589954557,1.67726916406701,1.57260083605093,1.50176892841506,0.48217676009124,2.56511469367124,1.79025009479181,0.91332076882317,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,1.32171328579026,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0,0,0.473447805734733,0,0.334231370655521,0,0.443067789167242,0.270803863765016,0.128091319725675,0,0.328875809207352,0.552700035571697,0.869409257205157,0.296573126324121,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0,0,0,0,0.221729397462564,0,0.327447688744282,0.364295288292542,0,0.649094787309367,0.174129737299267,0.930705723632056,0,0,0.74291500265913,0.39752481473341,0,0,0,0.838998872419812,0,0.417989933073621,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=219931 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20820 | |||
|TSSclassifier=S | |||
|UniProt=A6NCB1,Q59G56,Q8NHX9 | |||
|association_with_transcript=-26bp_to_ENST00000356782,NM_139075,uc001oor.2,uc001oos.2,uc009ysk.1,uc010rqg.1_5end | |||
|coexpression_cluster_id=C806 | |||
|description=CAGE_peak_3_at_TPCN2_5end | |||
|id=chr11:68816311..68816323,+ | |||
|ontology_enrichment_celltype=CL:0000839!4.21e-32!70;CL:0000557!2.13e-30!71;CL:0000766!3.84e-30!76;CL:0002194!9.13e-30!63;CL:0000576!9.13e-30!63;CL:0000040!9.13e-30!63;CL:0000559!9.13e-30!63;CL:0002009!2.46e-29!65;CL:0002057!1.56e-28!42;CL:0000860!1.08e-27!45;CL:0000763!7.67e-17!112;CL:0000049!7.67e-17!112;CL:0002031!2.73e-12!124;CL:0000738!1.44e-11!140;CL:0002087!4.01e-10!119;CL:0002032!4.71e-07!165;CL:0000837!4.71e-07!165;CL:0002393!5.17e-07!9;CL:0002397!5.17e-07!9;CL:0000037!5.46e-07!172;CL:0000566!5.46e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.14e-66;33!CL:0002057;4.14e-66;33!CL:0000473;2.54e-61;39!CL:0000234;2.54e-61;39!CL:0000576;1.52e-47;48!CL:0000766;8.00e-42;69!CL:0000763;3.32e-17;100!CL:0002393;3.20e-15;6!CL:0002397;3.20e-15;6!CL:0000148;3.60e-13;10!CL:0002087;3.45e-11;104!CL:0000738;1.52e-10;136!CL:0000235;3.32e-10;6!CL:0002567;1.99e-09;3!CL:0000147;4.67e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.25e-99,48;CL:0000234,1.25e-99,48;CL:0000860,2.24e-90,42;CL:0002057,2.24e-90,42;CL:0002009,1.92e-81,61;CL:0002194,8.99e-81,59;CL:0000576,8.99e-81,59;CL:0000040,8.99e-81,59;CL:0000559,8.99e-81,59;CL:0000766,9.68e-81,72;CL:0000557,1.91e-80,67;CL:0000839,2.82e-78,66;CL:0000763,8.12e-52,108;CL:0000049,8.12e-52,108;CL:0000738,4.02e-40,136;CL:0002031,2.19e-39,120;CL:0002087,1.94e-37,115;CL:0002032,2.23e-30,161;CL:0000837,2.23e-30,161;CL:0000037,6.59e-30,168;CL:0000988,1.06e-27,177;CL:0002393,1.25e-17,9;CL:0002397,1.25e-17,9;CL:0000219,1.44e-14,386;CL:0000148,2.76e-13,10;CL:0000541,2.76e-13,10;CL:0000134,1.36e-11,354;CL:0002320,4.28e-11,361;CL:0000235,2.12e-10,6;CL:0002567,1.56e-09,3;CL:0000147,3.89e-09,14;CL:0000048,2.85e-07,427;CL:0000034,4.09e-07,441;CL:0000723,5.47e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.00e-64;42!CL:0000049;5.10e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.64e-29!80;UBERON:0001474!6.22e-27!86;UBERON:0002390!2.20e-24!102;UBERON:0003061!2.20e-24!102;UBERON:0002193!1.83e-21!112;UBERON:0004765!7.97e-20!101;UBERON:0001434!7.97e-20!101;UBERON:0002405!4.17e-17!115;UBERON:0003081!1.43e-09!216;UBERON:0002204!3.29e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p3@TPCN2 | |||
}} |
Revision as of 19:21, 10 September 2013
Short description: | p3@TPCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TPCN2_5end |
Coexpression cluster: | C806_Melanocyte_CD14_Monocytederived_Macrophage_granulocyte_Mast_Eosinophils |
Association with transcript: | -26bp_to_ENST00000356782, NM_139075, uc001oor.2, uc001oos.2, uc009ysk.1, uc010rqg.1_5end |
EntrezGene: | TPCN2 |
HGNC: | 20820 |
UniProt: | A6NCB1Q59G56Q8NHX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.67e-72 | 76 |
bone element | 2.78e-66 | 82 |
hematopoietic system | 2.58e-63 | 98 |
blood island | 2.58e-63 | 98 |
skeletal element | 2.88e-59 | 90 |
immune system | 6.06e-57 | 93 |
hemolymphoid system | 3.34e-56 | 108 |
skeletal system | 4.61e-52 | 100 |
musculoskeletal system | 5.28e-26 | 167 |
lateral plate mesoderm | 1.17e-24 | 203 |
mesoderm | 1.48e-12 | 315 |
mesoderm-derived structure | 1.48e-12 | 315 |
presumptive mesoderm | 1.48e-12 | 315 |
connective tissue | 4.73e-11 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.