FFCP PHASE1:Hg19::chr11:117860654..117860665,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:117860654..117860665,+|id=chr11:117860654..117860665,+|ontology_enrichment_celltype=CL:0002009!2.58e-70!65;CL:0002194!4.43e-66!63;CL:0000576!4.43e-66!63;CL:0000040!4.43e-66!63;CL:0000559!4.43e-66!63;CL:0000557!3.61e-63!71;CL:0002057!2.11e-59!42;CL:0000839!4.22e-58!70;CL:0000766!1.77e-57!76;CL:0000860!1.16e-54!45;CL:0000763!6.75e-44!112;CL:0000049!6.75e-44!112;CL:0000738!4.83e-43!140;CL:0002087!1.03e-39!119;CL:0002031!2.92e-36!124;CL:0000037!7.82e-32!172;CL:0000566!7.82e-32!172;CL:0002032!7.68e-30!165;CL:0000837!7.68e-30!165;CL:0000988!3.80e-29!182;CL:0002393!3.34e-19!9;CL:0002397!3.34e-19!9;CL:0000990!5.64e-16!8;CL:0000451!9.61e-13!10;CL:0000453!1.32e-11!5;CL:0000840!1.86e-10!5;CL:0001029!1.86e-10!5;CL:0002619!4.88e-08!3;CL:0000875!2.54e-07!3;CL:0002396!2.54e-07!3;CL:0000134!4.48e-07!358|ontology_enrichment_celltype_v019=CL:0000840;1.46e-34;5!CL:0000576;9.22e-32;48!CL:0000473;9.63e-25;39!CL:0000234;9.63e-25;39!CL:0000860;1.16e-24;33!CL:0002057;1.16e-24;33!CL:0002619;1.67e-24;3!CL:0000990;5.01e-23;8!CL:0000451;8.03e-19;10!CL:0000766;2.15e-18;69!CL:0001014;1.26e-17;2!CL:0001016;1.26e-17;2!CL:0000738;1.04e-11;136!CL:0000763;6.72e-10;100!CL:0002087;1.43e-08;104!CL:0000453;1.41e-07;5|ontology_enrichment_celltype_v019_2=CL:0002009,1.45e-70,61;CL:0000557,4.90e-64,67;CL:0002194,1.09e-60,59;CL:0000576,1.09e-60,59;CL:0000040,1.09e-60,59;CL:0000559,1.09e-60,59;CL:0000839,5.39e-54,66;CL:0000766,2.82e-49,72;CL:0000473,3.11e-39,48;CL:0000234,3.11e-39,48;CL:0000763,1.26e-38,108;CL:0000049,1.26e-38,108;CL:0000840,1.37e-34,5;CL:0001029,1.37e-34,5;CL:0002031,1.93e-34,120;CL:0000860,3.97e-34,42;CL:0002057,3.97e-34,42;CL:0000738,5.39e-30,136;CL:0002087,1.02e-29,115;CL:0002032,8.44e-25,161;CL:0000837,8.44e-25,161;CL:0002619,8.75e-25,3;CL:0000037,1.28e-23,168;CL:0000990,4.80e-23,8;CL:0000988,3.08e-22,177;CL:0000451,7.76e-19,10;CL:0001014,1.26e-17,2;CL:0001016,1.26e-17,2;CL:0000134,3.21e-09,354;CL:0002320,5.79e-09,361;CL:0002393,1.74e-08,9;CL:0002397,1.74e-08,9;CL:0000219,4.63e-08,386;CL:0000453,1.41e-07,5;CL:0000048,5.94e-07,427;CL:0000723,8.46e-07,433|ontology_enrichment_development_v019=CL:0002057;7.15e-26;42!CL:0000049;4.50e-13;108!UBERON:0010227;3.25e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.46e-55!102;UBERON:0003061!1.46e-55!102;UBERON:0002371!1.91e-54!80;UBERON:0002193!4.79e-51!112;UBERON:0001474!1.23e-49!86;UBERON:0002405!9.14e-42!115;UBERON:0004765!4.08e-40!101;UBERON:0001434!4.08e-40!101;UBERON:0003081!1.14e-21!216;UBERON:0002204!1.11e-20!167|ontology_enrichment_uberon_v019=UBERON:0002079;3.25e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.80e-56,76;UBERON:0001474,7.79e-52,82;UBERON:0004765,5.72e-47,90;UBERON:0002405,2.34e-45,93;UBERON:0002390,6.89e-43,98;UBERON:0003061,6.89e-43,98;UBERON:0001434,5.73e-42,100;UBERON:0002193,1.26e-38,108;UBERON:0002204,8.79e-24,167;UBERON:0003081,7.95e-21,203;UBERON:0000926,4.41e-12,315;UBERON:0004120,4.41e-12,315;UBERON:0006603,4.41e-12,315;UBERON:0002079,3.00e-09,1;UBERON:0002384,1.29e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,2.21598163412751,0.802177789880567,0.868043482863407,2.68698569087909,1.29557466407592,1.80302897343931,1.89017710413434,1.51150377475524,1.4555043671269,0.232429036905685,1.23350366406548,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,0,1.12945403725563,1.09162460023138,2.02251136000576,0,0.641858054152187,1.27867425159808,0.989553900560148,0.398927315243264,0.426224750532694,1.45104619314292,0,0.622822248995575,0,0,0.434377689410233,1.21079900526674,0.736555271975129,0.316462387440884,0.845021145247767,1.27562579979026,0.838634582033504,0.898629049171961,1.50176892841506,0.64290234678832,0.285012743741249,0.99458338599545,1.27864907635244,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24547393654683,3.65672448328461,4.91944453919801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,2.00902836572851,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,4.27450393947851,2.32140586367385,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.930053882193542,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0|short_description=p@chr11:117860654..117860665,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:117860654..117860665,+ | |||
|id=chr11:117860654..117860665,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.58e-70!65;CL:0002194!4.43e-66!63;CL:0000576!4.43e-66!63;CL:0000040!4.43e-66!63;CL:0000559!4.43e-66!63;CL:0000557!3.61e-63!71;CL:0002057!2.11e-59!42;CL:0000839!4.22e-58!70;CL:0000766!1.77e-57!76;CL:0000860!1.16e-54!45;CL:0000763!6.75e-44!112;CL:0000049!6.75e-44!112;CL:0000738!4.83e-43!140;CL:0002087!1.03e-39!119;CL:0002031!2.92e-36!124;CL:0000037!7.82e-32!172;CL:0000566!7.82e-32!172;CL:0002032!7.68e-30!165;CL:0000837!7.68e-30!165;CL:0000988!3.80e-29!182;CL:0002393!3.34e-19!9;CL:0002397!3.34e-19!9;CL:0000990!5.64e-16!8;CL:0000451!9.61e-13!10;CL:0000453!1.32e-11!5;CL:0000840!1.86e-10!5;CL:0001029!1.86e-10!5;CL:0002619!4.88e-08!3;CL:0000875!2.54e-07!3;CL:0002396!2.54e-07!3;CL:0000134!4.48e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.46e-34;5!CL:0000576;9.22e-32;48!CL:0000473;9.63e-25;39!CL:0000234;9.63e-25;39!CL:0000860;1.16e-24;33!CL:0002057;1.16e-24;33!CL:0002619;1.67e-24;3!CL:0000990;5.01e-23;8!CL:0000451;8.03e-19;10!CL:0000766;2.15e-18;69!CL:0001014;1.26e-17;2!CL:0001016;1.26e-17;2!CL:0000738;1.04e-11;136!CL:0000763;6.72e-10;100!CL:0002087;1.43e-08;104!CL:0000453;1.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.45e-70,61;CL:0000557,4.90e-64,67;CL:0002194,1.09e-60,59;CL:0000576,1.09e-60,59;CL:0000040,1.09e-60,59;CL:0000559,1.09e-60,59;CL:0000839,5.39e-54,66;CL:0000766,2.82e-49,72;CL:0000473,3.11e-39,48;CL:0000234,3.11e-39,48;CL:0000763,1.26e-38,108;CL:0000049,1.26e-38,108;CL:0000840,1.37e-34,5;CL:0001029,1.37e-34,5;CL:0002031,1.93e-34,120;CL:0000860,3.97e-34,42;CL:0002057,3.97e-34,42;CL:0000738,5.39e-30,136;CL:0002087,1.02e-29,115;CL:0002032,8.44e-25,161;CL:0000837,8.44e-25,161;CL:0002619,8.75e-25,3;CL:0000037,1.28e-23,168;CL:0000990,4.80e-23,8;CL:0000988,3.08e-22,177;CL:0000451,7.76e-19,10;CL:0001014,1.26e-17,2;CL:0001016,1.26e-17,2;CL:0000134,3.21e-09,354;CL:0002320,5.79e-09,361;CL:0002393,1.74e-08,9;CL:0002397,1.74e-08,9;CL:0000219,4.63e-08,386;CL:0000453,1.41e-07,5;CL:0000048,5.94e-07,427;CL:0000723,8.46e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.15e-26;42!CL:0000049;4.50e-13;108!UBERON:0010227;3.25e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.46e-55!102;UBERON:0003061!1.46e-55!102;UBERON:0002371!1.91e-54!80;UBERON:0002193!4.79e-51!112;UBERON:0001474!1.23e-49!86;UBERON:0002405!9.14e-42!115;UBERON:0004765!4.08e-40!101;UBERON:0001434!4.08e-40!101;UBERON:0003081!1.14e-21!216;UBERON:0002204!1.11e-20!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;3.25e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.80e-56,76;UBERON:0001474,7.79e-52,82;UBERON:0004765,5.72e-47,90;UBERON:0002405,2.34e-45,93;UBERON:0002390,6.89e-43,98;UBERON:0003061,6.89e-43,98;UBERON:0001434,5.73e-42,100;UBERON:0002193,1.26e-38,108;UBERON:0002204,8.79e-24,167;UBERON:0003081,7.95e-21,203;UBERON:0000926,4.41e-12,315;UBERON:0004120,4.41e-12,315;UBERON:0006603,4.41e-12,315;UBERON:0002079,3.00e-09,1;UBERON:0002384,1.29e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,2.21598163412751,0.802177789880567,0.868043482863407,2.68698569087909,1.29557466407592,1.80302897343931,1.89017710413434,1.51150377475524,1.4555043671269,0.232429036905685,1.23350366406548,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,0,1.12945403725563,1.09162460023138,2.02251136000576,0,0.641858054152187,1.27867425159808,0.989553900560148,0.398927315243264,0.426224750532694,1.45104619314292,0,0.622822248995575,0,0,0.434377689410233,1.21079900526674,0.736555271975129,0.316462387440884,0.845021145247767,1.27562579979026,0.838634582033504,0.898629049171961,1.50176892841506,0.64290234678832,0.285012743741249,0.99458338599545,1.27864907635244,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24547393654683,3.65672448328461,4.91944453919801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,2.00902836572851,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,4.27450393947851,2.32140586367385,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.930053882193542,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p@chr11:117860654..117860665,+ | |||
}} |
Revision as of 15:59, 10 September 2013
Short description: | p@chr11:117860654..117860665, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:117860654..117860665, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.80e-56 | 76 |
bone element | 7.79e-52 | 82 |
skeletal element | 5.72e-47 | 90 |
immune system | 2.34e-45 | 93 |
hematopoietic system | 6.89e-43 | 98 |
blood island | 6.89e-43 | 98 |
skeletal system | 5.73e-42 | 100 |
hemolymphoid system | 1.26e-38 | 108 |
musculoskeletal system | 8.79e-24 | 167 |
lateral plate mesoderm | 7.95e-21 | 203 |
mesoderm | 4.41e-12 | 315 |
mesoderm-derived structure | 4.41e-12 | 315 |
presumptive mesoderm | 4.41e-12 | 315 |
left cardiac atrium | 3.00e-09 | 1 |
connective tissue | 1.29e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.