FFCP PHASE1:Hg19::chr12:13252703..13252714,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr12:13252703..13252714,+|id=chr12:13252703..13252714,+|ontology_enrichment_celltype=CL:0002057!2.70e-42!42;CL:0000860!1.99e-38!45;CL:0000766!4.62e-23!76;CL:0000839!6.14e-23!70;CL:0002009!6.36e-23!65;CL:0002194!1.43e-22!63;CL:0000576!1.43e-22!63;CL:0000040!1.43e-22!63;CL:0000559!1.43e-22!63;CL:0000557!1.50e-22!71;CL:0000763!1.39e-17!112;CL:0000049!1.39e-17!112;CL:0000738!3.24e-13!140;CL:0002087!3.76e-12!119;CL:0002031!4.59e-12!124;CL:0000037!3.58e-11!172;CL:0000566!3.58e-11!172;CL:0000988!1.03e-10!182;CL:0002032!1.41e-10!165;CL:0000837!1.41e-10!165;CL:0002393!3.93e-09!9;CL:0002397!3.93e-09!9|ontology_enrichment_celltype_v019=CL:0000860;1.44e-45;33!CL:0002057;1.44e-45;33!CL:0000473;1.31e-33;39!CL:0000234;1.31e-33;39!CL:0000576;6.52e-32;48!CL:0000766;3.24e-23;69!CL:0000767;8.56e-19;3!CL:0002393;4.08e-16;6!CL:0002397;4.08e-16;6!CL:0002087;4.11e-09;104!CL:0000763;7.49e-09;100!CL:0000094;2.39e-07;8|ontology_enrichment_celltype_v019_2=CL:0000860,1.82e-58,42;CL:0002057,1.82e-58,42;CL:0000473,1.30e-50,48;CL:0000234,1.30e-50,48;CL:0000766,1.84e-42,72;CL:0002194,1.31e-39,59;CL:0000576,1.31e-39,59;CL:0000040,1.31e-39,59;CL:0000559,1.31e-39,59;CL:0002009,3.43e-38,61;CL:0000839,5.19e-35,66;CL:0000557,1.97e-34,67;CL:0000763,8.23e-27,108;CL:0000049,8.23e-27,108;CL:0000738,2.87e-22,136;CL:0002087,2.47e-20,115;CL:0000767,5.97e-19,3;CL:0002031,2.08e-17,120;CL:0000037,4.41e-17,168;CL:0002032,2.05e-16,161;CL:0000837,2.05e-16,161;CL:0000988,5.85e-16,177;CL:0002393,1.04e-10,9;CL:0002397,1.04e-10,9;CL:0000134,1.12e-07,354;CL:0002320,2.03e-07,361;CL:0000094,2.10e-07,8|ontology_enrichment_development_v019=CL:0002057;1.71e-41;42!UBERON:0005425;2.51e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.05e-19!80;UBERON:0001474!9.90e-19!86;UBERON:0004765!2.69e-17!101;UBERON:0001434!2.69e-17!101;UBERON:0002390!3.05e-16!102;UBERON:0003061!3.05e-16!102;UBERON:0002193!7.39e-16!112;UBERON:0002405!6.12e-12!115;UBERON:0003081!1.39e-10!216;UBERON:0002204!1.43e-08!167|ontology_enrichment_uberon_v019=UBERON:0000941;2.51e-07;1!UBERON:0001785;2.51e-07;1!UBERON:0002464;2.51e-07;1!UBERON:0004904;2.51e-07;1!UBERON:0001021;2.51e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.86e-30,76;UBERON:0001474,2.08e-27,82;UBERON:0002390,1.28e-24,98;UBERON:0003061,1.28e-24,98;UBERON:0004765,1.31e-24,90;UBERON:0002405,1.11e-23,93;UBERON:0002193,6.17e-22,108;UBERON:0001434,9.84e-22,100;UBERON:0003081,6.66e-12,203;UBERON:0002204,2.65e-11,167;UBERON:0000941,2.09e-07,1;UBERON:0001785,2.09e-07,1;UBERON:0002464,2.09e-07,1;UBERON:0004904,2.09e-07,1;UBERON:0001021,2.09e-07,1;UBERON:0003902,2.09e-07,1;UBERON:0005425,2.09e-07,1;UBERON:0002384,4.56e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,5.50709987588466,1.53531759238885,3.40595471295367,0,0,0,0,0,0,2.76997704265939,2.00544447470142,3.25516306073778,0,0,0,0.145398238779565,0.377875943688809,0.970336244751265,0.464858073811369,1.23350366406548,3.09706370895104,3.16461631554365,1.5369642391746,5.43909128743746,2.41321976515633,4.51839278508678,12.1883837934908,0.941211697713023,0.818718450173537,0.674170453335254,2.14258724659632,0.320929027076094,3.19668562899521,0.989553900560148,0.997318288108159,0,1.45104619314292,1.13477044938228,1.86846674698672,3.76872997885115,6.25779502104242,4.99534342821768,0,0.368277635987565,2.84816148696796,0.633765858935825,0.637812899895131,1.04829322754188,0.561643155732475,0.300353785683013,0.16072558669708,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,1.58891016975863,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0.621984346622316,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.08212715601380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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:13252703..13252714,+ | |||
|id=chr12:13252703..13252714,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.70e-42!42;CL:0000860!1.99e-38!45;CL:0000766!4.62e-23!76;CL:0000839!6.14e-23!70;CL:0002009!6.36e-23!65;CL:0002194!1.43e-22!63;CL:0000576!1.43e-22!63;CL:0000040!1.43e-22!63;CL:0000559!1.43e-22!63;CL:0000557!1.50e-22!71;CL:0000763!1.39e-17!112;CL:0000049!1.39e-17!112;CL:0000738!3.24e-13!140;CL:0002087!3.76e-12!119;CL:0002031!4.59e-12!124;CL:0000037!3.58e-11!172;CL:0000566!3.58e-11!172;CL:0000988!1.03e-10!182;CL:0002032!1.41e-10!165;CL:0000837!1.41e-10!165;CL:0002393!3.93e-09!9;CL:0002397!3.93e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-45;33!CL:0002057;1.44e-45;33!CL:0000473;1.31e-33;39!CL:0000234;1.31e-33;39!CL:0000576;6.52e-32;48!CL:0000766;3.24e-23;69!CL:0000767;8.56e-19;3!CL:0002393;4.08e-16;6!CL:0002397;4.08e-16;6!CL:0002087;4.11e-09;104!CL:0000763;7.49e-09;100!CL:0000094;2.39e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.82e-58,42;CL:0002057,1.82e-58,42;CL:0000473,1.30e-50,48;CL:0000234,1.30e-50,48;CL:0000766,1.84e-42,72;CL:0002194,1.31e-39,59;CL:0000576,1.31e-39,59;CL:0000040,1.31e-39,59;CL:0000559,1.31e-39,59;CL:0002009,3.43e-38,61;CL:0000839,5.19e-35,66;CL:0000557,1.97e-34,67;CL:0000763,8.23e-27,108;CL:0000049,8.23e-27,108;CL:0000738,2.87e-22,136;CL:0002087,2.47e-20,115;CL:0000767,5.97e-19,3;CL:0002031,2.08e-17,120;CL:0000037,4.41e-17,168;CL:0002032,2.05e-16,161;CL:0000837,2.05e-16,161;CL:0000988,5.85e-16,177;CL:0002393,1.04e-10,9;CL:0002397,1.04e-10,9;CL:0000134,1.12e-07,354;CL:0002320,2.03e-07,361;CL:0000094,2.10e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-41;42!UBERON:0005425;2.51e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.05e-19!80;UBERON:0001474!9.90e-19!86;UBERON:0004765!2.69e-17!101;UBERON:0001434!2.69e-17!101;UBERON:0002390!3.05e-16!102;UBERON:0003061!3.05e-16!102;UBERON:0002193!7.39e-16!112;UBERON:0002405!6.12e-12!115;UBERON:0003081!1.39e-10!216;UBERON:0002204!1.43e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.51e-07;1!UBERON:0001785;2.51e-07;1!UBERON:0002464;2.51e-07;1!UBERON:0004904;2.51e-07;1!UBERON:0001021;2.51e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.86e-30,76;UBERON:0001474,2.08e-27,82;UBERON:0002390,1.28e-24,98;UBERON:0003061,1.28e-24,98;UBERON:0004765,1.31e-24,90;UBERON:0002405,1.11e-23,93;UBERON:0002193,6.17e-22,108;UBERON:0001434,9.84e-22,100;UBERON:0003081,6.66e-12,203;UBERON:0002204,2.65e-11,167;UBERON:0000941,2.09e-07,1;UBERON:0001785,2.09e-07,1;UBERON:0002464,2.09e-07,1;UBERON:0004904,2.09e-07,1;UBERON:0001021,2.09e-07,1;UBERON:0003902,2.09e-07,1;UBERON:0005425,2.09e-07,1;UBERON:0002384,4.56e-07,371 | |||
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|short_description=p@chr12:13252703..13252714,+ | |||
}} |
Revision as of 21:47, 10 September 2013
Short description: | p@chr12:13252703..13252714, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:13252703..13252714, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.82e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.82e-58 | 42 |
defensive cell | 1.30e-50 | 48 |
phagocyte | 1.30e-50 | 48 |
myeloid leukocyte | 1.84e-42 | 72 |
monopoietic cell | 1.31e-39 | 59 |
monocyte | 1.31e-39 | 59 |
monoblast | 1.31e-39 | 59 |
promonocyte | 1.31e-39 | 59 |
macrophage dendritic cell progenitor | 3.43e-38 | 61 |
myeloid lineage restricted progenitor cell | 5.19e-35 | 66 |
granulocyte monocyte progenitor cell | 1.97e-34 | 67 |
myeloid cell | 8.23e-27 | 108 |
common myeloid progenitor | 8.23e-27 | 108 |
leukocyte | 2.87e-22 | 136 |
nongranular leukocyte | 2.47e-20 | 115 |
basophil | 5.97e-19 | 3 |
hematopoietic lineage restricted progenitor cell | 2.08e-17 | 120 |
hematopoietic stem cell | 4.41e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.05e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-16 | 161 |
hematopoietic cell | 5.85e-16 | 177 |
intermediate monocyte | 1.04e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.04e-10 | 9 |
mesenchymal cell | 1.12e-07 | 354 |
connective tissue cell | 2.03e-07 | 361 |
granulocyte | 2.10e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.86e-30 | 76 |
bone element | 2.08e-27 | 82 |
hematopoietic system | 1.28e-24 | 98 |
blood island | 1.28e-24 | 98 |
skeletal element | 1.31e-24 | 90 |
immune system | 1.11e-23 | 93 |
hemolymphoid system | 6.17e-22 | 108 |
skeletal system | 9.84e-22 | 100 |
lateral plate mesoderm | 6.66e-12 | 203 |
musculoskeletal system | 2.65e-11 | 167 |
cranial nerve II | 2.09e-07 | 1 |
cranial nerve | 2.09e-07 | 1 |
nerve trunk | 2.09e-07 | 1 |
nerve connecting eye with brain | 2.09e-07 | 1 |
nerve | 2.09e-07 | 1 |
retinal neural layer | 2.09e-07 | 1 |
presumptive neural retina | 2.09e-07 | 1 |
connective tissue | 4.56e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.