FFCP PHASE1:Hg19::chr12:24858680..24858711,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C817|description=CAGE_peak_at_chr12:24858680..24858711,-|id=chr12:24858680..24858711,-|ontology_enrichment_celltype=CL:0002057!1.58e-27!42;CL:0000860!1.77e-25!45;CL:0000080!3.62e-24!6;CL:0002087!5.21e-20!119;CL:0000988!4.51e-17!182;CL:0002194!5.88e-17!63;CL:0000576!5.88e-17!63;CL:0000040!5.88e-17!63;CL:0000559!5.88e-17!63;CL:0002009!2.40e-16!65;CL:0000738!2.71e-16!140;CL:0002031!1.94e-15!124;CL:0000839!5.71e-15!70;CL:0000557!1.02e-14!71;CL:0000037!1.12e-13!172;CL:0000566!1.12e-13!172;CL:0000766!1.48e-13!76;CL:0002032!9.96e-12!165;CL:0000837!9.96e-12!165;CL:0000763!1.72e-09!112;CL:0000049!1.72e-09!112;CL:0000842!2.24e-08!3|ontology_enrichment_celltype_v019=CL:0000860;5.49e-47;33!CL:0002057;5.49e-47;33!CL:0000473;1.31e-33;39!CL:0000234;1.31e-33;39!CL:0000576;6.00e-19;48!CL:0000766;1.39e-14;69!CL:0002087;1.54e-11;104!CL:0000763;1.73e-09;100|ontology_enrichment_celltype_v019_2=CL:0000860,8.17e-41,42;CL:0002057,8.17e-41,42;CL:0000473,1.49e-35,48;CL:0000234,1.49e-35,48;CL:0002194,3.54e-28,59;CL:0000576,3.54e-28,59;CL:0000040,3.54e-28,59;CL:0000559,3.54e-28,59;CL:0002009,3.18e-27,61;CL:0000839,4.32e-25,66;CL:0000557,1.06e-24,67;CL:0000766,6.48e-23,72;CL:0002087,2.02e-16,115;CL:0000988,3.76e-16,177;CL:0002031,1.12e-15,120;CL:0000763,7.18e-15,108;CL:0000049,7.18e-15,108;CL:0000738,1.17e-13,136;CL:0002032,2.69e-11,161;CL:0000837,2.69e-11,161;CL:0000037,9.28e-11,168|ontology_enrichment_development_v019=CL:0002057;5.02e-27;42|ontology_enrichment_disease=DOID:4960!5.69e-07!1;DOID:0070004!5.69e-07!1;DOID:0060060!6.76e-07!1;DOID:0060061!6.76e-07!1;DOID:8691!6.76e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.92e-20!102;UBERON:0003061!4.92e-20!102;UBERON:0002193!7.81e-20!112;UBERON:0002371!1.20e-14!80;UBERON:0001474!2.12e-13!86;UBERON:0004765!6.26e-11!101;UBERON:0001434!6.26e-11!101;UBERON:0002405!1.42e-10!115;UBERON:0000178!1.58e-09!15;UBERON:0000179!1.58e-09!15;UBERON:0000463!1.58e-09!15;UBERON:0003081!5.00e-08!216;UBERON:0002372!5.37e-07!1;UBERON:0001961!5.37e-07!1;UBERON:0001744!5.37e-07!1;UBERON:0001735!5.37e-07!1;UBERON:0001154!8.49e-07!1;UBERON:0001153!8.49e-07!1|ontology_enrichment_uberon_v019=UBERON:0002331;4.15e-12;10!UBERON:0000178;3.00e-08;15!UBERON:0000179;3.00e-08;15!UBERON:0000463;3.00e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.47e-26,98;UBERON:0003061,1.47e-26,98;UBERON:0002193,5.66e-24,108;UBERON:0002371,1.19e-21,76;UBERON:0001474,5.52e-20,82;UBERON:0004765,4.22e-18,90;UBERON:0002405,1.77e-17,93;UBERON:0001434,3.64e-16,100;UBERON:0002331,4.15e-12,10;UBERON:0000358,4.15e-12,10;UBERON:0000307,4.15e-12,10;UBERON:0000091,4.15e-12,10;UBERON:0000087,4.15e-12,10;UBERON:0007010,4.15e-12,10;UBERON:0007806,4.15e-12,10;UBERON:0008780,4.15e-12,10;UBERON:0005728,4.15e-12,10;UBERON:0003081,5.31e-12,203;UBERON:0002204,4.17e-09,167;UBERON:0000178,3.00e-08,15;UBERON:0000179,3.00e-08,15;UBERON:0000463,3.00e-08,15;UBERON:0000926,4.55e-07,315;UBERON:0004120,4.55e-07,315;UBERON:0006603,4.55e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,6.89491361473237,5.16387746867061,2.70852973188684,0.188242339542605,0,0,8.57034898638527,9.9487998393589,13.4260796417799,0,0,0,2.03146467040009,3.40431134814684,15.5705562248894,0,0,0,4.84319602106695,6.62899744777616,17.0889689218078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.715619820073,17.0518235746174,20.0490143050474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20619766846903,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0820925207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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C817 | |||
|description=CAGE_peak_at_chr12:24858680..24858711,- | |||
|id=chr12:24858680..24858711,- | |||
|ontology_enrichment_celltype=CL:0002057!1.58e-27!42;CL:0000860!1.77e-25!45;CL:0000080!3.62e-24!6;CL:0002087!5.21e-20!119;CL:0000988!4.51e-17!182;CL:0002194!5.88e-17!63;CL:0000576!5.88e-17!63;CL:0000040!5.88e-17!63;CL:0000559!5.88e-17!63;CL:0002009!2.40e-16!65;CL:0000738!2.71e-16!140;CL:0002031!1.94e-15!124;CL:0000839!5.71e-15!70;CL:0000557!1.02e-14!71;CL:0000037!1.12e-13!172;CL:0000566!1.12e-13!172;CL:0000766!1.48e-13!76;CL:0002032!9.96e-12!165;CL:0000837!9.96e-12!165;CL:0000763!1.72e-09!112;CL:0000049!1.72e-09!112;CL:0000842!2.24e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.49e-47;33!CL:0002057;5.49e-47;33!CL:0000473;1.31e-33;39!CL:0000234;1.31e-33;39!CL:0000576;6.00e-19;48!CL:0000766;1.39e-14;69!CL:0002087;1.54e-11;104!CL:0000763;1.73e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.17e-41,42;CL:0002057,8.17e-41,42;CL:0000473,1.49e-35,48;CL:0000234,1.49e-35,48;CL:0002194,3.54e-28,59;CL:0000576,3.54e-28,59;CL:0000040,3.54e-28,59;CL:0000559,3.54e-28,59;CL:0002009,3.18e-27,61;CL:0000839,4.32e-25,66;CL:0000557,1.06e-24,67;CL:0000766,6.48e-23,72;CL:0002087,2.02e-16,115;CL:0000988,3.76e-16,177;CL:0002031,1.12e-15,120;CL:0000763,7.18e-15,108;CL:0000049,7.18e-15,108;CL:0000738,1.17e-13,136;CL:0002032,2.69e-11,161;CL:0000837,2.69e-11,161;CL:0000037,9.28e-11,168 | |||
|ontology_enrichment_development_v019=CL:0002057;5.02e-27;42 | |||
|ontology_enrichment_disease=DOID:4960!5.69e-07!1;DOID:0070004!5.69e-07!1;DOID:0060060!6.76e-07!1;DOID:0060061!6.76e-07!1;DOID:8691!6.76e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.92e-20!102;UBERON:0003061!4.92e-20!102;UBERON:0002193!7.81e-20!112;UBERON:0002371!1.20e-14!80;UBERON:0001474!2.12e-13!86;UBERON:0004765!6.26e-11!101;UBERON:0001434!6.26e-11!101;UBERON:0002405!1.42e-10!115;UBERON:0000178!1.58e-09!15;UBERON:0000179!1.58e-09!15;UBERON:0000463!1.58e-09!15;UBERON:0003081!5.00e-08!216;UBERON:0002372!5.37e-07!1;UBERON:0001961!5.37e-07!1;UBERON:0001744!5.37e-07!1;UBERON:0001735!5.37e-07!1;UBERON:0001154!8.49e-07!1;UBERON:0001153!8.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.15e-12;10!UBERON:0000178;3.00e-08;15!UBERON:0000179;3.00e-08;15!UBERON:0000463;3.00e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.47e-26,98;UBERON:0003061,1.47e-26,98;UBERON:0002193,5.66e-24,108;UBERON:0002371,1.19e-21,76;UBERON:0001474,5.52e-20,82;UBERON:0004765,4.22e-18,90;UBERON:0002405,1.77e-17,93;UBERON:0001434,3.64e-16,100;UBERON:0002331,4.15e-12,10;UBERON:0000358,4.15e-12,10;UBERON:0000307,4.15e-12,10;UBERON:0000091,4.15e-12,10;UBERON:0000087,4.15e-12,10;UBERON:0007010,4.15e-12,10;UBERON:0007806,4.15e-12,10;UBERON:0008780,4.15e-12,10;UBERON:0005728,4.15e-12,10;UBERON:0003081,5.31e-12,203;UBERON:0002204,4.17e-09,167;UBERON:0000178,3.00e-08,15;UBERON:0000179,3.00e-08,15;UBERON:0000463,3.00e-08,15;UBERON:0000926,4.55e-07,315;UBERON:0004120,4.55e-07,315;UBERON:0006603,4.55e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,6.89491361473237,5.16387746867061,2.70852973188684,0.188242339542605,0,0,8.57034898638527,9.9487998393589,13.4260796417799,0,0,0,2.03146467040009,3.40431134814684,15.5705562248894,0,0,0,4.84319602106695,6.62899744777616,17.0889689218078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.715619820073,17.0518235746174,20.0490143050474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20619766846903,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80822463617505,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:24858680..24858711,- | |||
}} |
Revision as of 22:12, 10 September 2013
Short description: | p@chr12:24858680..24858711, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:24858680..24858711, - |
Coexpression cluster: | C817_cord_CD14_mycosis_xeroderma_migratory_B_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.17e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.17e-41 | 42 |
defensive cell | 1.49e-35 | 48 |
phagocyte | 1.49e-35 | 48 |
monopoietic cell | 3.54e-28 | 59 |
monocyte | 3.54e-28 | 59 |
monoblast | 3.54e-28 | 59 |
promonocyte | 3.54e-28 | 59 |
macrophage dendritic cell progenitor | 3.18e-27 | 61 |
myeloid lineage restricted progenitor cell | 4.32e-25 | 66 |
granulocyte monocyte progenitor cell | 1.06e-24 | 67 |
myeloid leukocyte | 6.48e-23 | 72 |
nongranular leukocyte | 2.02e-16 | 115 |
hematopoietic cell | 3.76e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 1.12e-15 | 120 |
myeloid cell | 7.18e-15 | 108 |
common myeloid progenitor | 7.18e-15 | 108 |
leukocyte | 1.17e-13 | 136 |
hematopoietic oligopotent progenitor cell | 2.69e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.69e-11 | 161 |
hematopoietic stem cell | 9.28e-11 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.47e-26 | 98 |
blood island | 1.47e-26 | 98 |
hemolymphoid system | 5.66e-24 | 108 |
bone marrow | 1.19e-21 | 76 |
bone element | 5.52e-20 | 82 |
skeletal element | 4.22e-18 | 90 |
immune system | 1.77e-17 | 93 |
skeletal system | 3.64e-16 | 100 |
umbilical cord | 4.15e-12 | 10 |
blastocyst | 4.15e-12 | 10 |
blastula | 4.15e-12 | 10 |
bilaminar disc | 4.15e-12 | 10 |
inner cell mass | 4.15e-12 | 10 |
cleaving embryo | 4.15e-12 | 10 |
connecting stalk | 4.15e-12 | 10 |
inner cell mass derived epiblast | 4.15e-12 | 10 |
extraembryonic mesoderm | 4.15e-12 | 10 |
lateral plate mesoderm | 5.31e-12 | 203 |
musculoskeletal system | 4.17e-09 | 167 |
blood | 3.00e-08 | 15 |
haemolymphatic fluid | 3.00e-08 | 15 |
organism substance | 3.00e-08 | 15 |
mesoderm | 4.55e-07 | 315 |
mesoderm-derived structure | 4.55e-07 | 315 |
presumptive mesoderm | 4.55e-07 | 315 |
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