FFCP PHASE1:Hg19::chr12:89746541..89746567,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:89746541..89746567,+ | |||
|id=chr12:89746541..89746567,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.03e-27!42;CL:0000860!1.74e-25!45;CL:0000766!1.29e-21!76;CL:0000557!1.54e-16!71;CL:0000839!8.72e-16!70;CL:0002009!2.84e-15!65;CL:0002194!3.54e-15!63;CL:0000576!3.54e-15!63;CL:0000040!3.54e-15!63;CL:0000559!3.54e-15!63;CL:0000003!4.99e-14!722;CL:0000763!1.24e-13!112;CL:0000049!1.24e-13!112;CL:0002371!1.13e-11!591;CL:0000144!1.57e-11!625;CL:0000012!5.06e-11!682;CL:0000738!3.40e-10!140;CL:0000548!3.96e-10!679;CL:0000004!3.96e-10!679;CL:0000255!3.96e-10!679;CL:0000063!3.09e-08!578;CL:0000037!4.02e-08!172;CL:0000566!4.02e-08!172;CL:0000988!8.44e-08!182;CL:0000723!1.08e-07!436;CL:0000048!1.44e-07!430;CL:0000034!1.48e-07!444;CL:0002031!2.27e-07!124;CL:0002032!2.37e-07!165;CL:0000837!2.37e-07!165;CL:0002087!5.82e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.34e-40;33!CL:0002057;2.34e-40;33!CL:0000576;3.77e-27;48!CL:0000473;8.79e-27;39!CL:0000234;8.79e-27;39!CL:0000766;4.92e-21;69!CL:0000094;1.49e-11;8!CL:0000763;7.38e-10;100!CL:0000081;1.09e-09;11!CL:0002393;3.36e-08;6!CL:0002397;3.36e-08;6!CL:0002087;3.68e-08;104!CL:0000071;6.45e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.65e-52,42;CL:0002057,7.65e-52,42;CL:0000473,1.92e-43,48;CL:0000234,1.92e-43,48;CL:0000766,9.72e-43,72;CL:0002194,9.02e-32,59;CL:0000576,9.02e-32,59;CL:0000040,9.02e-32,59;CL:0000559,9.02e-32,59;CL:0000839,9.22e-32,66;CL:0000557,4.57e-31,67;CL:0002009,2.82e-30,61;CL:0000763,3.53e-26,108;CL:0000049,3.53e-26,108;CL:0000738,1.13e-22,136;CL:0002087,3.19e-17,115;CL:0000037,3.43e-17,168;CL:0002032,6.13e-17,161;CL:0000837,6.13e-17,161;CL:0002031,1.22e-16,120;CL:0000988,4.71e-16,177;CL:0000094,7.57e-12,8;CL:0000081,7.48e-10,11;CL:0002393,3.61e-09,9;CL:0002397,3.61e-09,9;CL:0000071,5.49e-08,18;CL:0002546,5.49e-08,18;CL:0000034,2.52e-07,441;CL:0000048,3.87e-07,427;CL:0000723,4.14e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.68e-37;42!CL:0000049;6.39e-08;108!CL:0002546;6.45e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.57e-20!216;UBERON:0002390!4.35e-18!102;UBERON:0003061!4.35e-18!102;UBERON:0002193!5.23e-16!112;UBERON:0002371!4.44e-15!80;UBERON:0001474!4.38e-13!86;UBERON:0004765!4.67e-12!101;UBERON:0001434!4.67e-12!101;UBERON:0002204!5.19e-11!167;UBERON:0004535!3.36e-10!110;UBERON:0002405!4.75e-10!115;UBERON:0001009!3.73e-09!113;UBERON:0001981!1.39e-08!60;UBERON:0007500!1.39e-08!60;UBERON:0004537!1.39e-08!60;UBERON:0006965!1.39e-08!60;UBERON:0001637!3.47e-08!42;UBERON:0003509!3.47e-08!42;UBERON:0004572!3.47e-08!42;UBERON:0000055!3.45e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.41e-09;15!UBERON:0000179;1.41e-09;15!UBERON:0000463;1.41e-09;15!UBERON:0004638;6.45e-08;18!UBERON:0001986;6.45e-08;18!UBERON:0004852;6.45e-08;18!UBERON:0007500;3.33e-07;56!UBERON:0001981;3.33e-07;56!UBERON:0004537;3.33e-07;56!UBERON:0001637;6.67e-07;42!UBERON:0003509;6.67e-07;42!UBERON:0004572;6.67e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.34e-34,203;UBERON:0002390,7.19e-33,98;UBERON:0003061,7.19e-33,98;UBERON:0002193,4.18e-28,108;UBERON:0002371,5.21e-27,76;UBERON:0001474,3.44e-25,82;UBERON:0004765,5.17e-24,90;UBERON:0001434,4.15e-21,100;UBERON:0002405,2.14e-20,93;UBERON:0002204,2.80e-17,167;UBERON:0000926,3.70e-17,315;UBERON:0004120,3.70e-17,315;UBERON:0006603,3.70e-17,315;UBERON:0004535,9.10e-11,109;UBERON:0001009,3.57e-10,112;UBERON:0000178,1.69e-09,15;UBERON:0000179,1.69e-09,15;UBERON:0000463,1.69e-09,15;UBERON:0007500,2.20e-09,59;UBERON:0001981,2.20e-09,59;UBERON:0004537,2.20e-09,59;UBERON:0006965,2.20e-09,59;UBERON:0001637,6.44e-09,42;UBERON:0003509,6.44e-09,42;UBERON:0004572,6.44e-09,42;UBERON:0004638,5.49e-08,18;UBERON:0001986,5.49e-08,18;UBERON:0004852,5.49e-08,18;UBERON:0000055,3.26e-07,68;UBERON:0002050,4.70e-07,564;UBERON:0004872,4.84e-07,83 | |||
|phase1_expression=0,1.07050261945492,0,1.0007329835313,0.446961094427288,0.872338524100369,0,0,1.82829939739887,0,2.09340350391728,0.655324116390517,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0,0,0,6.68719270643137,2.68680578668049,1.85779347979291,0.919421224478927,2.10844143144775,2.21852406100073,0,0,0.587200878669695,6.64794490238253,9.42558903109666,10.6335326650767,0,0,0.257575567634187,3.48955773070955,3.40088349319928,9.46077838632483,6.74044207026485,4.93401465626191,3.09706370895104,37.6877033942017,16.9066066309206,24.3576696785243,28.958637181876,13.5551783552603,13.5426486594342,3.57660445130949,2.18324920046277,6.51698104890745,37.3422348692501,18.6138835704134,35.8028790447463,8.57613380485462,11.369428484433,8.95071976118658,23.5069483289153,20.9932533135722,26.7813567068097,18.592401228999,14.0800387973454,18.2438629552298,11.502590550034,14.362827803515,27.2157653199161,1.47878700418359,1.27562579979026,1.88692780957538,1.23561494261145,2.25265339262259,0.803627933485401,2.28010194992999,1.79025009479181,0.730656615058536,0,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0.569212969109448,1.76171156811282,0,1.32171328579026,2.80254281490768,0.526768169550154,0.196709770113833,0.786021525498329,0.411202997999018,0,0,0,0,0.668462741311041,0.294605907474837,0.443067789167242,0,0.896639238079726,0.780356085359269,0.986627427622057,3.03985019564433,0.289803085735052,0,0,0,0.226618685395132,0.383220493601921,0.34362744548263,1.26509846009751,0,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0.236777252044017,0,0.604820229674197,1.60464117470104,0.434473211648397,2.43806866313962,0.670700859703636,0,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0,0.443458794925128,0.263504357079378,0.0654895377488563,1.09288586487763,0.370784442784429,0,0,0.132957960518865,0.476981248610684,0.571994910780128,0,0.79504962946682,2.58070378531837,0.347140501607594,1.13061588384802,2.09749718104953,2.75118041940067,1.67195973229448,0.775250277507987,0,0,1.61131726843659,1.52054421143703,0.488124115096339,1.10298924103761,1.62028389576352,0.17859945656816,0,0.225222960966644,7.66583187329416,3.79706263827252,1.09921046358244,5.27121669744253,3.87780264148325,0,0,0,2.64818361626438,1.14734648299525,0,0,0,1.2333377420858,0,0.942974704487816,0.653847612453835,0.454072282934794,0,0,1.24864030732128,0,0,0.352303495931295,0.485618833104395,0.702254033511242,0.408308342509787,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0.336672227908132,0.250237039743928,0.554128230968366,1.31693286264251,0.30648779579902,0.150238058906597,0.113432183160021,0.717558542755448,0.427114777637135,0.211931901159562,0.600182192168805,0,0.515281080091258,0.18611685633159,0.843881661206331,0.292311015483596,0.757301322732344,0.368199594569197,1.13152239773168,0.355009592516614,0.10075209822764,0,0.57978255948989,0.545492241181669,2.86804595389004,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0.928735856063958,1.44375896333917,0.236613600079688,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,1.86575485194663,0,0.603173834469785,0.370353780634118,0,1.03993478527958,0,0.115930404975077,0.234817388471643,0.288732895522148,0.462985512576611,0.380508304469197,1.58040879591855,0.858486162094873,0.984868024349589,0.468008530278475,0.891786973732369,1.87467667973554,0,1.41775097242386,0.0895585227028483,0,4.21720947081732,13.3019074231905,0.880484340132261,1.03664057770386,2.01767934783746,0.75745460055828,0.126995788584338,0.763976851116555,1.17217447210047,0,0.719792448923265,0.300343057843917,0,0.224262168690721,0,0.07333828582095,0,0,0,0.26593811658487,0,0.514414748524284,0,0.799266537048298,0.428933980974443,0.542621605391443,0,0.65147236858747,0.355391948742546,0.791951872933429,2.41151501647669,0.871533458600294,0.99972991182057,0,0,0,0,0,0,0.289562613335158,1.02738161275192,0.358121926479791,1.12085143993527,0.788123040807709,1.2937654491571,1.79680250791648,0.254094624222463,0,0,0.335032530668698,0.637938751653163,6.74106321552464,5.9832291840805,14.5045429702612,0.36807447515742,0,0.271265023699736,0.623912584592421,0.356857977594324,0.157702415033935,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0.343143423810856,0.413536052245775,3.45142721309787,3.52200940751366,0,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.462629081407967,0.532685175939381,0.0821271560138091,0,0.232420756919918,0.362578348774867,0.802025881213139,0.276242966807689,0.229628896329213,0.364182336013434,0.262248829918848,0,0.231046011313244,0.784349769176855,0,0,1.13733384070897,1.87103075804167,0.647747748306418,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,2.60024098414608,0,0.386682873168488,0.770243085573222,0.307007349452259,0.413509717453592,0,0,0.17045325483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| |||
|short_description=p@chr12:89746541..89746567,+ | |||
}} |
Revision as of 00:50, 11 September 2013
Short description: | p@chr12:89746541..89746567, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:89746541..89746567, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 7.34e-34 | 203 |
hematopoietic system | 7.19e-33 | 98 |
blood island | 7.19e-33 | 98 |
hemolymphoid system | 4.18e-28 | 108 |
bone marrow | 5.21e-27 | 76 |
bone element | 3.44e-25 | 82 |
skeletal element | 5.17e-24 | 90 |
skeletal system | 4.15e-21 | 100 |
immune system | 2.14e-20 | 93 |
musculoskeletal system | 2.80e-17 | 167 |
mesoderm | 3.70e-17 | 315 |
mesoderm-derived structure | 3.70e-17 | 315 |
presumptive mesoderm | 3.70e-17 | 315 |
cardiovascular system | 9.10e-11 | 109 |
circulatory system | 3.57e-10 | 112 |
blood | 1.69e-09 | 15 |
haemolymphatic fluid | 1.69e-09 | 15 |
organism substance | 1.69e-09 | 15 |
epithelial tube open at both ends | 2.20e-09 | 59 |
blood vessel | 2.20e-09 | 59 |
blood vasculature | 2.20e-09 | 59 |
vascular cord | 2.20e-09 | 59 |
artery | 6.44e-09 | 42 |
arterial blood vessel | 6.44e-09 | 42 |
arterial system | 6.44e-09 | 42 |
blood vessel endothelium | 5.49e-08 | 18 |
endothelium | 5.49e-08 | 18 |
cardiovascular system endothelium | 5.49e-08 | 18 |
vessel | 3.26e-07 | 68 |
embryonic structure | 4.70e-07 | 564 |
splanchnic layer of lateral plate mesoderm | 4.84e-07 | 83 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.