FFCP PHASE1:Hg19::chr13:46549536..46549554,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23091|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=20368|TSSclassifier=N|UniProt=Q5T200|association_with_transcript=218bp_to_AB020660_5end|description=CAGE_peak_21_at_ZC3H13_5end|id=chr13:46549536..46549554,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;5.07e-10;1!UBERON:0006222;1.36e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;2.22e-08;10|ontology_enrichment_disease_v019_2=DOID:171,2.11e-08,10|ontology_enrichment_uberon=UBERON:0001017!2.63e-09!82;UBERON:0000073!7.65e-09!94;UBERON:0001016!7.65e-09!94;UBERON:0005743!7.90e-09!86;UBERON:0001049!2.10e-08!57;UBERON:0005068!2.10e-08!57;UBERON:0006241!2.10e-08!57;UBERON:0007135!2.10e-08!57;UBERON:0002020!2.98e-08!34;UBERON:0003528!2.98e-08!34;UBERON:0001893!7.14e-08!34;UBERON:0002780!1.38e-07!41;UBERON:0001890!1.38e-07!41;UBERON:0006240!1.38e-07!41;UBERON:0002791!1.43e-07!33;UBERON:0001869!2.93e-07!32;UBERON:0003080!3.74e-07!42;UBERON:0000955!4.24e-07!69;UBERON:0006238!4.24e-07!69|ontology_enrichment_uberon_v019=UBERON:0002346;1.13e-09;4!UBERON:0000923;1.13e-09;4!UBERON:0010316;1.13e-09;4!UBERON:0005291;1.13e-09;4!UBERON:0007029;1.36e-09;1!UBERON:0001874;1.36e-09;1!UBERON:0002050;6.62e-08;5!UBERON:0005423;6.62e-08;5!UBERON:0003528;2.56e-07;34!UBERON:0002020;2.56e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.79e-11,53;UBERON:0002616,4.79e-11,53;UBERON:0001049,2.14e-10,56;UBERON:0005068,2.14e-10,56;UBERON:0006241,2.14e-10,56;UBERON:0007135,2.14e-10,56;UBERON:0007029,8.91e-10,1;UBERON:0002346,9.27e-10,86;UBERON:0001874,1.25e-09,1;UBERON:0001016,4.55e-09,89;UBERON:0002780,6.72e-09,41;UBERON:0001890,6.72e-09,41;UBERON:0003080,6.72e-09,41;UBERON:0006240,6.72e-09,41;UBERON:0001017,2.30e-08,81;UBERON:0000955,3.17e-08,68;UBERON:0006238,3.17e-08,68;UBERON:0004121,3.92e-08,171;UBERON:0000924,3.92e-08,171;UBERON:0006601,3.92e-08,171;UBERON:0003528,4.82e-08,34;UBERON:0002020,4.82e-08,34;UBERON:0010371,1.03e-07,104;UBERON:0003075,9.78e-07,82;UBERON:0007284,9.78e-07,82|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0.286235987131057,0.547497700291537,0,0.229240217243854,0.328402357799783,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0.929716147622738,0,0.619412741790207,0,0.768482119587302,0,0,0.645484683583826,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0.852449501065388,0.290209238628584,0.56738522469114,0,0.75374599577023,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,1.64225599384209,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0.283604451492204,0,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0,0,0.538168907066586,0,0.423863802319124,0,0,0,0.18611685633159,0.337552664482532,0,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0.243947412259191,0.662648841607426,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,1.39310378409594,0,0.118306800039844,0,0.241011029883482,0,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0,2.95394953340702,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0.231860809950154,0,0,0.462985512576611,0.380508304469197,0,0,0,0,0.297262324577456,0,0.671928512795438,0.425325291727159,0.447792613514241,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.317489471460845,0.763976851116555,0,0,0.308482478109971,0.600686115687835,0,0,0,0.07333828582095,0.387815147273333,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.394061520403854,0.431255149719035,0.385029108839245,0.254094624222463,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0.415941723061614,0.535286966391485,0,0.35142424497814,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0,0,0,0,0,0,0,0.841980283299221,0.128139149255701,0,0.482561763430822,0,0.308419387605311,0,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,0.552485933615378,0,0.364182336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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20368 | |||
|TSSclassifier=N | |||
|UniProt=Q5T200 | |||
|association_with_transcript=218bp_to_AB020660_5end | |||
|description=CAGE_peak_21_at_ZC3H13_5end | |||
|id=chr13:46549536..46549554,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.07e-10;1!UBERON:0006222;1.36e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.22e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.11e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.63e-09!82;UBERON:0000073!7.65e-09!94;UBERON:0001016!7.65e-09!94;UBERON:0005743!7.90e-09!86;UBERON:0001049!2.10e-08!57;UBERON:0005068!2.10e-08!57;UBERON:0006241!2.10e-08!57;UBERON:0007135!2.10e-08!57;UBERON:0002020!2.98e-08!34;UBERON:0003528!2.98e-08!34;UBERON:0001893!7.14e-08!34;UBERON:0002780!1.38e-07!41;UBERON:0001890!1.38e-07!41;UBERON:0006240!1.38e-07!41;UBERON:0002791!1.43e-07!33;UBERON:0001869!2.93e-07!32;UBERON:0003080!3.74e-07!42;UBERON:0000955!4.24e-07!69;UBERON:0006238!4.24e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.13e-09;4!UBERON:0000923;1.13e-09;4!UBERON:0010316;1.13e-09;4!UBERON:0005291;1.13e-09;4!UBERON:0007029;1.36e-09;1!UBERON:0001874;1.36e-09;1!UBERON:0002050;6.62e-08;5!UBERON:0005423;6.62e-08;5!UBERON:0003528;2.56e-07;34!UBERON:0002020;2.56e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.79e-11,53;UBERON:0002616,4.79e-11,53;UBERON:0001049,2.14e-10,56;UBERON:0005068,2.14e-10,56;UBERON:0006241,2.14e-10,56;UBERON:0007135,2.14e-10,56;UBERON:0007029,8.91e-10,1;UBERON:0002346,9.27e-10,86;UBERON:0001874,1.25e-09,1;UBERON:0001016,4.55e-09,89;UBERON:0002780,6.72e-09,41;UBERON:0001890,6.72e-09,41;UBERON:0003080,6.72e-09,41;UBERON:0006240,6.72e-09,41;UBERON:0001017,2.30e-08,81;UBERON:0000955,3.17e-08,68;UBERON:0006238,3.17e-08,68;UBERON:0004121,3.92e-08,171;UBERON:0000924,3.92e-08,171;UBERON:0006601,3.92e-08,171;UBERON:0003528,4.82e-08,34;UBERON:0002020,4.82e-08,34;UBERON:0010371,1.03e-07,104;UBERON:0003075,9.78e-07,82;UBERON:0007284,9.78e-07,82 | |||
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| |||
|short_description=p21@ZC3H13 | |||
}} |
Revision as of 02:22, 11 September 2013
Short description: | p21@ZC3H13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_ZC3H13_5end |
Coexpression cluster: | NA |
Association with transcript: | 218bp_to_AB020660_5end |
EntrezGene: | ZC3H13 |
HGNC: | 20368 |
UniProt: | Q5T200 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.79e-11 | 53 |
regional part of brain | 4.79e-11 | 53 |
neural tube | 2.14e-10 | 56 |
neural rod | 2.14e-10 | 56 |
future spinal cord | 2.14e-10 | 56 |
neural keel | 2.14e-10 | 56 |
surface | 8.91e-10 | 1 |
neurectoderm | 9.27e-10 | 86 |
putamen | 1.25e-09 | 1 |
nervous system | 4.55e-09 | 89 |
regional part of forebrain | 6.72e-09 | 41 |
forebrain | 6.72e-09 | 41 |
anterior neural tube | 6.72e-09 | 41 |
future forebrain | 6.72e-09 | 41 |
central nervous system | 2.30e-08 | 81 |
brain | 3.17e-08 | 68 |
future brain | 3.17e-08 | 68 |
ectoderm-derived structure | 3.92e-08 | 171 |
ectoderm | 3.92e-08 | 171 |
presumptive ectoderm | 3.92e-08 | 171 |
brain grey matter | 4.82e-08 | 34 |
gray matter | 4.82e-08 | 34 |
ecto-epithelium | 1.03e-07 | 104 |
neural plate | 9.78e-07 | 82 |
presumptive neural plate | 9.78e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.11e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.