FFCP PHASE1:Hg19::chr14:22990951..22990963,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C18|description=CAGE_peak_at_chr14:22990951..22990963,+|id=chr14:22990951..22990963,+|ontology_enrichment_celltype=CL:0000791!2.95e-30!18;CL:0000789!2.95e-30!18;CL:0002420!2.95e-30!18;CL:0002419!2.95e-30!18;CL:0000790!2.95e-30!18;CL:0000625!2.13e-24!11;CL:0000084!2.72e-24!25;CL:0000827!2.72e-24!25;CL:0000838!2.85e-23!52;CL:0000542!9.95e-23!53;CL:0000051!9.95e-23!53;CL:0000898!9.76e-12!3;CL:0000624!1.00e-09!6;CL:0000815!1.47e-08!2;CL:0000792!1.47e-08!2;CL:0002677!1.47e-08!2;CL:0002087!4.40e-08!119;CL:0002031!1.46e-07!124;CL:0000738!6.76e-07!140|ontology_enrichment_celltype_v019=CL:0000791;3.67e-36;18!CL:0000789;3.67e-36;18!CL:0002419;3.67e-36;18!CL:0000625;1.43e-26;11!CL:0000898;3.15e-26;3!CL:0000084;1.07e-25;25!CL:0000815;2.23e-18;2!CL:0000792;2.23e-18;2!CL:0002677;2.23e-18;2!CL:0000624;2.03e-13;6!CL:0000895;1.25e-09;1!CL:0000542;7.10e-07;53|ontology_enrichment_celltype_v019_2=CL:0000791,5.38e-36,18;CL:0000789,5.38e-36,18;CL:0002420,5.38e-36,18;CL:0002419,5.38e-36,18;CL:0000790,5.38e-36,18;CL:0000625,1.57e-26,11;CL:0000898,5.75e-26,3;CL:0000084,1.40e-25,25;CL:0000827,1.40e-25,25;CL:0000815,2.44e-18,2;CL:0000792,2.44e-18,2;CL:0002677,2.44e-18,2;CL:0000624,2.73e-13,6;CL:0000838,1.23e-11,52;CL:0000542,2.15e-11,53;CL:0000051,2.15e-11,53;CL:0000810,2.08e-09,1;CL:0000895,2.08e-09,1;CL:0002436,2.08e-09,1;CL:0002427,2.08e-09,1;CL:0002428,2.08e-09,1;CL:0002429,2.08e-09,1;CL:0002433,2.08e-09,1;CL:0002431,2.08e-09,1;CL:0002432,2.08e-09,1|ontology_enrichment_development_v019=CL:0000790;3.67e-36;18!CL:0002427;1.25e-09;1!CL:0000051;7.10e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!8.60e-09!4;UBERON:0005058!8.60e-09!4;UBERON:0009113!8.60e-09!4;UBERON:0003295!8.60e-09!4;UBERON:0005562!8.60e-09!4;UBERON:0004177!4.12e-08!7|ontology_enrichment_uberon_v019=UBERON:0002370;1.58e-17;2!UBERON:0005058;1.58e-17;2!UBERON:0009113;1.58e-17;2!UBERON:0004177;1.50e-07;5!UBERON:0005057;1.50e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.15e-19,4;UBERON:0005058,2.15e-19,4;UBERON:0009113,2.15e-19,4;UBERON:0003295,2.15e-19,4;UBERON:0005562,2.15e-19,4;UBERON:0003351,3.97e-13,6;UBERON:0004177,2.49e-11,7;UBERON:0005057,2.49e-11,7;UBERON:0000974,4.43e-08,10;UBERON:0003408,4.43e-08,10;UBERON:0001042,4.43e-08,10;UBERON:0009145,4.43e-08,10;UBERON:0006562,2.18e-07,11;UBERON:0009722,2.18e-07,11;UBERON:0007690,2.18e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,3.51091640320424,2.28145586643513,1.89379122293893,0,1.33692548262208,2.06224135232386,1.55073726208535,2.16643091012012,0.896639238079726,1.8208308658383,2.63100647365882,1.10540007114339,1.73881851441031,0.889719378972363,0.802622484269139,0,1.13309342697566,1.14966148080576,1.37450978193052,1.01207876807801,1.59282707162048,1.30216690771284,0.950452044448374,1.20460095262218,1.53583933385302,1.24930726552346,0.947109008176067,1.64225599384209,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr14:22990951..22990963,+ | |||
|id=chr14:22990951..22990963,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.95e-30!18;CL:0000789!2.95e-30!18;CL:0002420!2.95e-30!18;CL:0002419!2.95e-30!18;CL:0000790!2.95e-30!18;CL:0000625!2.13e-24!11;CL:0000084!2.72e-24!25;CL:0000827!2.72e-24!25;CL:0000838!2.85e-23!52;CL:0000542!9.95e-23!53;CL:0000051!9.95e-23!53;CL:0000898!9.76e-12!3;CL:0000624!1.00e-09!6;CL:0000815!1.47e-08!2;CL:0000792!1.47e-08!2;CL:0002677!1.47e-08!2;CL:0002087!4.40e-08!119;CL:0002031!1.46e-07!124;CL:0000738!6.76e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.67e-36;18!CL:0000789;3.67e-36;18!CL:0002419;3.67e-36;18!CL:0000625;1.43e-26;11!CL:0000898;3.15e-26;3!CL:0000084;1.07e-25;25!CL:0000815;2.23e-18;2!CL:0000792;2.23e-18;2!CL:0002677;2.23e-18;2!CL:0000624;2.03e-13;6!CL:0000895;1.25e-09;1!CL:0000542;7.10e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.38e-36,18;CL:0000789,5.38e-36,18;CL:0002420,5.38e-36,18;CL:0002419,5.38e-36,18;CL:0000790,5.38e-36,18;CL:0000625,1.57e-26,11;CL:0000898,5.75e-26,3;CL:0000084,1.40e-25,25;CL:0000827,1.40e-25,25;CL:0000815,2.44e-18,2;CL:0000792,2.44e-18,2;CL:0002677,2.44e-18,2;CL:0000624,2.73e-13,6;CL:0000838,1.23e-11,52;CL:0000542,2.15e-11,53;CL:0000051,2.15e-11,53;CL:0000810,2.08e-09,1;CL:0000895,2.08e-09,1;CL:0002436,2.08e-09,1;CL:0002427,2.08e-09,1;CL:0002428,2.08e-09,1;CL:0002429,2.08e-09,1;CL:0002433,2.08e-09,1;CL:0002431,2.08e-09,1;CL:0002432,2.08e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.67e-36;18!CL:0002427;1.25e-09;1!CL:0000051;7.10e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!8.60e-09!4;UBERON:0005058!8.60e-09!4;UBERON:0009113!8.60e-09!4;UBERON:0003295!8.60e-09!4;UBERON:0005562!8.60e-09!4;UBERON:0004177!4.12e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.58e-17;2!UBERON:0005058;1.58e-17;2!UBERON:0009113;1.58e-17;2!UBERON:0004177;1.50e-07;5!UBERON:0005057;1.50e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.15e-19,4;UBERON:0005058,2.15e-19,4;UBERON:0009113,2.15e-19,4;UBERON:0003295,2.15e-19,4;UBERON:0005562,2.15e-19,4;UBERON:0003351,3.97e-13,6;UBERON:0004177,2.49e-11,7;UBERON:0005057,2.49e-11,7;UBERON:0000974,4.43e-08,10;UBERON:0003408,4.43e-08,10;UBERON:0001042,4.43e-08,10;UBERON:0009145,4.43e-08,10;UBERON:0006562,2.18e-07,11;UBERON:0009722,2.18e-07,11;UBERON:0007690,2.18e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,3.51091640320424,2.28145586643513,1.89379122293893,0,1.33692548262208,2.06224135232386,1.55073726208535,2.16643091012012,0.896639238079726,1.8208308658383,2.63100647365882,1.10540007114339,1.73881851441031,0.889719378972363,0.802622484269139,0,1.13309342697566,1.14966148080576,1.37450978193052,1.01207876807801,1.59282707162048,1.30216690771284,0.950452044448374,1.20460095262218,1.53583933385302,1.24930726552346,0.947109008176067,1.64225599384209,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87307838524418,1.73809200028402,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr14:22990951..22990963,+ | |||
}} |
Revision as of 03:52, 11 September 2013
Short description: | p@chr14:22990951..22990963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:22990951..22990963, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.38e-36 | 18 |
alpha-beta T cell | 5.38e-36 | 18 |
immature T cell | 5.38e-36 | 18 |
mature T cell | 5.38e-36 | 18 |
immature alpha-beta T cell | 5.38e-36 | 18 |
CD8-positive, alpha-beta T cell | 1.57e-26 | 11 |
naive T cell | 5.75e-26 | 3 |
T cell | 1.40e-25 | 25 |
pro-T cell | 1.40e-25 | 25 |
regulatory T cell | 2.44e-18 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.44e-18 | 2 |
naive regulatory T cell | 2.44e-18 | 2 |
CD4-positive, alpha-beta T cell | 2.73e-13 | 6 |
lymphoid lineage restricted progenitor cell | 1.23e-11 | 52 |
lymphocyte | 2.15e-11 | 53 |
common lymphoid progenitor | 2.15e-11 | 53 |
CD4-positive, alpha-beta thymocyte | 2.08e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.08e-09 | 1 |
mature CD4 single-positive thymocyte | 2.08e-09 | 1 |
resting double-positive thymocyte | 2.08e-09 | 1 |
double-positive blast | 2.08e-09 | 1 |
CD69-positive double-positive thymocyte | 2.08e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.08e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.08e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.08e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.15e-19 | 4 |
hemolymphoid system gland | 2.15e-19 | 4 |
thymic region | 2.15e-19 | 4 |
pharyngeal gland | 2.15e-19 | 4 |
thymus primordium | 2.15e-19 | 4 |
pharyngeal epithelium | 3.97e-13 | 6 |
hemopoietic organ | 2.49e-11 | 7 |
immune organ | 2.49e-11 | 7 |
neck | 4.43e-08 | 10 |
gland of gut | 4.43e-08 | 10 |
chordate pharynx | 4.43e-08 | 10 |
pharyngeal region of foregut | 4.43e-08 | 10 |
pharynx | 2.18e-07 | 11 |
entire pharyngeal arch endoderm | 2.18e-07 | 11 |
early pharyngeal endoderm | 2.18e-07 | 11 |
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