FFCP PHASE1:Hg19::chr16:3086927..3086954,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:3086927..3086954,-|id=chr16:3086927..3086954,-|ontology_enrichment_celltype=CL:0002076!7.98e-20!43;CL:0000066!3.03e-17!254;CL:0000223!7.02e-14!59;CL:0002251!4.97e-10!21;CL:0002368!2.10e-09!13;CL:0000039!7.46e-09!7;CL:0000586!7.46e-09!7|ontology_enrichment_celltype_v019=CL:0000039;9.34e-12;7!CL:0000586;9.34e-12;7!CL:0002076;1.19e-08;42!CL:0002251;1.13e-07;20|ontology_enrichment_celltype_v019_2=CL:0002076,7.40e-12,42;CL:0000039,1.17e-11,7;CL:0000586,1.17e-11,7;CL:0000066,3.49e-11,253;CL:0000223,5.88e-09,58;CL:0002251,1.09e-07,20|ontology_enrichment_development_v019=UBERON:0006595;8.27e-10;86|ontology_enrichment_disease=DOID:305!3.75e-17!106;DOID:1749!9.76e-12!14;DOID:0050687!1.40e-11!143;DOID:299!1.57e-10!25|ontology_enrichment_disease_v019=DOID:299;4.46e-15;25!DOID:305;2.92e-08;106!DOID:1749;4.20e-08;14!DOID:5093;7.91e-08;4!DOID:1612;7.91e-08;4|ontology_enrichment_disease_v019_2=DOID:305,1.18e-19,106;DOID:299,3.53e-15,25;DOID:0050687,6.82e-15,143;DOID:1749,2.79e-08,14;DOID:5093,6.95e-08,4;DOID:1612,6.95e-08,4|ontology_enrichment_uberon=UBERON:0004119!2.88e-24!169;UBERON:0000925!2.88e-24!169;UBERON:0006595!2.88e-24!169;UBERON:0001007!7.59e-21!155;UBERON:0001555!7.59e-21!155;UBERON:0007026!7.59e-21!155;UBERON:0004921!7.23e-19!129;UBERON:0004185!7.23e-19!129;UBERON:0000464!1.11e-17!104;UBERON:0001004!4.15e-16!72;UBERON:0000077!7.19e-15!130;UBERON:0000466!2.77e-14!126;UBERON:0000161!3.36e-11!35;UBERON:0000065!6.20e-11!53;UBERON:0001041!1.24e-10!98;UBERON:0005178!1.43e-10!34;UBERON:0002224!1.43e-10!34;UBERON:0005181!4.32e-10!35;UBERON:0000166!8.89e-10!21;UBERON:0000915!3.63e-09!52;UBERON:0005153!4.17e-09!37;UBERON:0005911!5.93e-09!82;UBERON:0002553!8.99e-09!70;UBERON:0005156!9.65e-09!59;UBERON:0000990!9.65e-09!59;UBERON:0003133!2.41e-08!48;UBERON:0003135!4.51e-08!11;UBERON:0000344!5.09e-08!12;UBERON:0002048!8.02e-08!22;UBERON:0000117!8.02e-08!22;UBERON:0000171!8.02e-08!22;UBERON:0000170!8.02e-08!22;UBERON:0005597!8.02e-08!22;UBERON:0000118!8.02e-08!22;UBERON:0005409!1.12e-07!35;UBERON:0001044!1.19e-07!6;UBERON:0003293!1.19e-07!6;UBERON:0003294!1.19e-07!6;UBERON:0010047!1.19e-07!6;UBERON:0000167!1.19e-07!6;UBERON:0000160!3.12e-07!27;UBERON:0000165!3.96e-07!28;UBERON:0000930!3.96e-07!28;UBERON:0003101!5.71e-07!22;UBERON:0000079!5.71e-07!22;UBERON:0000072!6.57e-07!46;UBERON:0008947!9.28e-07!38;UBERON:0003258!9.28e-07!38|ontology_enrichment_uberon_v019=UBERON:0004921;1.45e-21;33!UBERON:0005409;2.48e-14;22!UBERON:0001041;7.53e-12;14!UBERON:0000160;9.70e-12;17!UBERON:0001555;8.67e-10;54!UBERON:0003135;3.46e-09;11!UBERON:0003101;6.06e-09;22!UBERON:0000079;6.06e-09;22!UBERON:0005178;6.57e-09;34!UBERON:0002224;6.57e-09;34!UBERON:0005181;4.88e-08;35!UBERON:0001044;7.16e-08;6!UBERON:0003293;7.16e-08;6!UBERON:0003294;7.16e-08;6!UBERON:0010047;7.16e-08;6!UBERON:0003408;7.16e-08;6!UBERON:0000167;7.16e-08;6!UBERON:0000058;9.56e-08;10!UBERON:0000059;1.39e-07;11!UBERON:0003133;3.99e-07;44!UBERON:0002048;4.00e-07;22!UBERON:0000117;4.00e-07;22!UBERON:0000171;4.00e-07;22!UBERON:0000170;4.00e-07;22!UBERON:0000915;7.24e-07;52!UBERON:0004175;9.34e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0004921,4.60e-23,118;UBERON:0001007,4.30e-22,145;UBERON:0001555,4.30e-22,145;UBERON:0007026,4.30e-22,145;UBERON:0004119,2.43e-21,160;UBERON:0000925,2.43e-21,160;UBERON:0006595,2.43e-21,160;UBERON:0005409,3.34e-12,25;UBERON:0001041,6.10e-12,87;UBERON:0000160,9.15e-12,17;UBERON:0001004,9.73e-11,74;UBERON:0005178,2.52e-10,34;UBERON:0002224,2.52e-10,34;UBERON:0000915,3.00e-10,52;UBERON:0005181,6.64e-10,35;UBERON:0000161,9.03e-10,36;UBERON:0003135,3.91e-09,11;UBERON:0003101,7.70e-09,22;UBERON:0000079,7.70e-09,22;UBERON:0005156,9.69e-09,59;UBERON:0000990,9.69e-09,59;UBERON:0005153,5.05e-08,37;UBERON:0011216,8.16e-08,223;UBERON:0001044,9.66e-08,6;UBERON:0003293,9.66e-08,6;UBERON:0003294,9.66e-08,6;UBERON:0010047,9.66e-08,6;UBERON:0000167,9.66e-08,6;UBERON:0000059,1.13e-07,11;UBERON:0000166,1.15e-07,22;UBERON:0000065,1.22e-07,54;UBERON:0003133,1.51e-07,48;UBERON:0002553,2.35e-07,61;UBERON:0005157,2.75e-07,47;UBERON:0002048,3.74e-07,22;UBERON:0000117,3.74e-07,22;UBERON:0000171,3.74e-07,22;UBERON:0000170,3.74e-07,22;UBERON:0005597,3.74e-07,22;UBERON:0000118,3.74e-07,22;UBERON:0001046,4.33e-07,19;UBERON:0005911,7.57e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,2.5500670180478,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:3086927..3086954,- | |||
|id=chr16:3086927..3086954,- | |||
|ontology_enrichment_celltype=CL:0002076!7.98e-20!43;CL:0000066!3.03e-17!254;CL:0000223!7.02e-14!59;CL:0002251!4.97e-10!21;CL:0002368!2.10e-09!13;CL:0000039!7.46e-09!7;CL:0000586!7.46e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.34e-12;7!CL:0000586;9.34e-12;7!CL:0002076;1.19e-08;42!CL:0002251;1.13e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.40e-12,42;CL:0000039,1.17e-11,7;CL:0000586,1.17e-11,7;CL:0000066,3.49e-11,253;CL:0000223,5.88e-09,58;CL:0002251,1.09e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006595;8.27e-10;86 | |||
|ontology_enrichment_disease=DOID:305!3.75e-17!106;DOID:1749!9.76e-12!14;DOID:0050687!1.40e-11!143;DOID:299!1.57e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.46e-15;25!DOID:305;2.92e-08;106!DOID:1749;4.20e-08;14!DOID:5093;7.91e-08;4!DOID:1612;7.91e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.18e-19,106;DOID:299,3.53e-15,25;DOID:0050687,6.82e-15,143;DOID:1749,2.79e-08,14;DOID:5093,6.95e-08,4;DOID:1612,6.95e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.88e-24!169;UBERON:0000925!2.88e-24!169;UBERON:0006595!2.88e-24!169;UBERON:0001007!7.59e-21!155;UBERON:0001555!7.59e-21!155;UBERON:0007026!7.59e-21!155;UBERON:0004921!7.23e-19!129;UBERON:0004185!7.23e-19!129;UBERON:0000464!1.11e-17!104;UBERON:0001004!4.15e-16!72;UBERON:0000077!7.19e-15!130;UBERON:0000466!2.77e-14!126;UBERON:0000161!3.36e-11!35;UBERON:0000065!6.20e-11!53;UBERON:0001041!1.24e-10!98;UBERON:0005178!1.43e-10!34;UBERON:0002224!1.43e-10!34;UBERON:0005181!4.32e-10!35;UBERON:0000166!8.89e-10!21;UBERON:0000915!3.63e-09!52;UBERON:0005153!4.17e-09!37;UBERON:0005911!5.93e-09!82;UBERON:0002553!8.99e-09!70;UBERON:0005156!9.65e-09!59;UBERON:0000990!9.65e-09!59;UBERON:0003133!2.41e-08!48;UBERON:0003135!4.51e-08!11;UBERON:0000344!5.09e-08!12;UBERON:0002048!8.02e-08!22;UBERON:0000117!8.02e-08!22;UBERON:0000171!8.02e-08!22;UBERON:0000170!8.02e-08!22;UBERON:0005597!8.02e-08!22;UBERON:0000118!8.02e-08!22;UBERON:0005409!1.12e-07!35;UBERON:0001044!1.19e-07!6;UBERON:0003293!1.19e-07!6;UBERON:0003294!1.19e-07!6;UBERON:0010047!1.19e-07!6;UBERON:0000167!1.19e-07!6;UBERON:0000160!3.12e-07!27;UBERON:0000165!3.96e-07!28;UBERON:0000930!3.96e-07!28;UBERON:0003101!5.71e-07!22;UBERON:0000079!5.71e-07!22;UBERON:0000072!6.57e-07!46;UBERON:0008947!9.28e-07!38;UBERON:0003258!9.28e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.45e-21;33!UBERON:0005409;2.48e-14;22!UBERON:0001041;7.53e-12;14!UBERON:0000160;9.70e-12;17!UBERON:0001555;8.67e-10;54!UBERON:0003135;3.46e-09;11!UBERON:0003101;6.06e-09;22!UBERON:0000079;6.06e-09;22!UBERON:0005178;6.57e-09;34!UBERON:0002224;6.57e-09;34!UBERON:0005181;4.88e-08;35!UBERON:0001044;7.16e-08;6!UBERON:0003293;7.16e-08;6!UBERON:0003294;7.16e-08;6!UBERON:0010047;7.16e-08;6!UBERON:0003408;7.16e-08;6!UBERON:0000167;7.16e-08;6!UBERON:0000058;9.56e-08;10!UBERON:0000059;1.39e-07;11!UBERON:0003133;3.99e-07;44!UBERON:0002048;4.00e-07;22!UBERON:0000117;4.00e-07;22!UBERON:0000171;4.00e-07;22!UBERON:0000170;4.00e-07;22!UBERON:0000915;7.24e-07;52!UBERON:0004175;9.34e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,4.60e-23,118;UBERON:0001007,4.30e-22,145;UBERON:0001555,4.30e-22,145;UBERON:0007026,4.30e-22,145;UBERON:0004119,2.43e-21,160;UBERON:0000925,2.43e-21,160;UBERON:0006595,2.43e-21,160;UBERON:0005409,3.34e-12,25;UBERON:0001041,6.10e-12,87;UBERON:0000160,9.15e-12,17;UBERON:0001004,9.73e-11,74;UBERON:0005178,2.52e-10,34;UBERON:0002224,2.52e-10,34;UBERON:0000915,3.00e-10,52;UBERON:0005181,6.64e-10,35;UBERON:0000161,9.03e-10,36;UBERON:0003135,3.91e-09,11;UBERON:0003101,7.70e-09,22;UBERON:0000079,7.70e-09,22;UBERON:0005156,9.69e-09,59;UBERON:0000990,9.69e-09,59;UBERON:0005153,5.05e-08,37;UBERON:0011216,8.16e-08,223;UBERON:0001044,9.66e-08,6;UBERON:0003293,9.66e-08,6;UBERON:0003294,9.66e-08,6;UBERON:0010047,9.66e-08,6;UBERON:0000167,9.66e-08,6;UBERON:0000059,1.13e-07,11;UBERON:0000166,1.15e-07,22;UBERON:0000065,1.22e-07,54;UBERON:0003133,1.51e-07,48;UBERON:0002553,2.35e-07,61;UBERON:0005157,2.75e-07,47;UBERON:0002048,3.74e-07,22;UBERON:0000117,3.74e-07,22;UBERON:0000171,3.74e-07,22;UBERON:0000170,3.74e-07,22;UBERON:0005597,3.74e-07,22;UBERON:0000118,3.74e-07,22;UBERON:0001046,4.33e-07,19;UBERON:0005911,7.57e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,2.5500670180478,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.975789649036763,0.795178609928912,2.20768491452085,0.621966330092223,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0.109750285408626,0,0.603173834469785,0.0925884451585296,0,0,0,0,0,0,0,0,4.74122638775565,1.71697232418975,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0.766765358330422,0,0,0.621984346622316,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0,5.24861636934609,0,0,0,1.80479845162965,0.847168708148562,0,0,0.422206515571503,0,0,0,0,0,0,0.764628819135115,4.15538004464362,0.223874754722178,0,0,0,0,0,1.03041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.960950336825531,0.382838137483752,2.52894452138875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,1.34060455107157,2.17781969722645,1.03558180854457,0.43050537267123,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,4.16568367167754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54991891428769,0,0,0,0,0.23874448473769,0.296964680832639,0.921482106297696,0,0,0,0,0,1.19548792950642,1.93398740871803,2.26739473068848,0,0,0,3.05552393900911,4.47552936689023,0,1.1837208676432,0,0,0,0,0,11.4588214877503,8.39615999963479,2.17499872630438,1.82069517256799,1.01701460117107,1.89110145414349,0,0,0,0,0,0,0,0,0,0,8.78369588955201,3.15496059865568,0,4.15015027898508,2.87224462111271,5.3237212241784,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,2.28525931422807,1.69623685720729,0,9.95261931078505,6.81123246675712,11.6095727537389,0,0,0,0,0,0,0,2.15231080825299,0,7.49710365413842,4.83962864194656,0,0,0,0,0,0,0,0,4.83836228250648,0,10.9342635151132,3.72371110174635,0.435296032902013,1.7472666824203,0,0,0,0,18.6218911657765,0,1.58186518546373,0,0,0,3.91102765469606,0.721429382263803,10.4591967422283,0,5.33134543470192,0,0,0,0,5.89235086541989,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,1.28602518772015,2.06309154895851,2.07720169014593,0.449947783103001,3.86900977278975,0,1.34173875039706,0.630445658393585,0.944182586429966,0,0,5.9493711169028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8011154686501,3.20362237703084,1.57204305099666,6.62782488555513,0,0,0,0.638341257770182,0,0,0,0,5.4968933687582,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76198794747607,0,0,0,0,0,9.93144504808056,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86480665151949,0.825788063434183,1.83428598521679,1.73288499225507,0,0,0,0.376051641746286,0,46.1093266627525,2.61906694481422,0,3.54854606920909,0,0,0,0,0,8.22386650285773,3.47347824872506,0,4.08839768446705,0,0,0.606965604236632,0.682986574053893,0.0887023701626388,0,0,0,0,0,2.44709084162552,4.00314773537622,0,12.8925195124343,8.21842848458546,0,0,0,0,0,0,0,0.207216164163037,1.0243108625637,15.20771255991,7.31386509994472,0,0,7.19757985324579,5.4985648450572,0,0,4.92163899910286,6.37976518499079,4.51096322434397,0.647428837187895,0,0,1.45713297917742,0.935757853848423,0.596852325484105,0,2.59775988689608,0,6.94429080406698,5.32501690944818,1.31135736302374,3.29222107453066,0.490296643507811,8.24867914855691,0,0,0,0,0,0,0,8.21348117586025,0.705789743431384,2.08627553391837,15.3370641531769,4.12856355064087,0,0,0,0,2.1161073620616,0,0,0,0,0,0,4.07955318967927,6.41321772637345,3.40011128278926,1.25353769646188,0.151557396436479,0,0,0,8.9558272398412,1.42838658878244,0.129177819672012,0.372448285775147,0,1.71847327351045,1.81905470062397,8.27323642008453,5.4757328173645,10.5069202702757,8.82183126329919,3.99192427855216,0.976839223331694,0,0,0,0,0.611207220914332,5.2896503181046,2.66302709674205,0.201273793591026,0 | |||
|short_description=p@chr16:3086927..3086954,- | |||
}} |
Revision as of 10:12, 11 September 2013
Short description: | p@chr16:3086927..3086954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:3086927..3086954, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.40e-12 | 42 |
germ line cell | 1.17e-11 | 7 |
germ cell | 1.17e-11 | 7 |
epithelial cell | 3.49e-11 | 253 |
endodermal cell | 5.88e-09 | 58 |
epithelial cell of alimentary canal | 1.09e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.18e-19 | 106 |
adenocarcinoma | 3.53e-15 | 25 |
cell type cancer | 6.82e-15 | 143 |
squamous cell carcinoma | 2.79e-08 | 14 |
thoracic cancer | 6.95e-08 | 4 |
breast cancer | 6.95e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.