FFCP PHASE1:Hg19::chr17:28257185..28257266,-: Difference between revisions
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{{FFCP | 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7.4616978755173,17.0493767969098,16.4906801062746,39.8730680985144,44.9056654839224,49.5756085597739,25.2300046103631,36.051941749477,35.7675280942369,29.0532133366085,18.747061194316,25.1737535119135,28.8319986880417,8.23430368943601,39.3401320877781,58.2582535015517,16.2687735146693,10.2833856332779,19.4182051525915,15.5310464325573,18.1128889261854,16.9064132103342,12.1285236250369,15.7280160713769,20.517710476927,15.0812252989427,26.761856883502,13.0442902527445,21.5815510058001,34.0059090429501,18.0772365899436,14.0871166689168,17.4298826436773,23.6099231544653,13.4267341957538,16.0026820098252,15.8967624422883,19.9534516747752,19.1086026575336,19.2013327038314,10.9886625658494,10.1024846629776,29.0225265925897,48.1549576018258,14.7964698048699,24.5334634447299,21.3103569981536,32.6446688796606,11.013151702791,30.8032806660158,30.2625418217753,11.8413386772502,30.5672222486374,26.8150513196572,21.4556899629402,27.6740840074982,35.2338948565823,12.7621181594501,59.3128691090925,28.4496050905507,28.8316703479998,21.4270666475156,9.82829546539238,48.171490115729,10.5656061679314,17.5988908352338,21.231654209134,37.8872955253795,91.3700685242606,18.5947009754359,12.58915569475,21.7727041011541,20.3352050372806,24.7997066212368,8.02056303465072,11.5762216483535,13.239137336414,25.2964154921003,11.1542187833102,26.8149560627157,20.3522784418188,31.8601449805064,68.8490843525504,10.5802783107205,18.0684831638388,42.6482054640491,42.5089728976755,64.8113467772034,33.8442000997246,94.2748143869226,29.7376185596137,42.6295704468087,59.9631565088448,21.6906457887267,15.9259126519449,23.4788606107749,13.8630799380406,14.1111375322852,7.59395918666111,16.7089626577671,6.39287790968687,71.4035943210461,35.9496445167223,12.8334280295897,30.9528924094083,53.0803349519192,35.1870815861836,42.1782173251478,55.8054350553197,39.0641390794466,107.207062567571,31.2506927108594,29.2764595249684,1.93458368795583,28.4910213636297,43.3918487061412,28.5841163886,23.6716585652286,23.676867900535,20.4015451374069,31.343644615172,15.7768968682425,36.5677163415355,31.8997951779818,27.0663895624287,14.5713136478611,14.5212221773451,41.0071689680765,9.80952571598262,42.9184598639463,54.197825395874,21.0210742670302,29.6627658333124,19.5936878548581,39.4058431997945,25.7310243007818,27.2581864008286,21.3432649087928,23.5591498389651,59.4483309160119,33.5577339879817,14.7915000913207,12.952437523392,40.2217697681383,15.8083739295395,22.0246533821667,25.7995513523907,16.5546039060733,35.9229855031789,18.2876887473404,77.0440316253595,37.9852385368114,42.9131339595134,28.6569485904892,32.0497064943085,44.3660228609851,28.1840615142838,36.0298001704282,39.6885265450999,35.7781939253016,36.8120734174896,25.571468578963,25.3971340035222,19.8570140620663,46.4282797790203,40.2432357585638,39.2101248431754,29.1632452032546,25.4890672031725,23.3080116590037,30.3596652355548,32.380934519677,17.8553938605658,30.3489589675495,21.9861344728321,70.8426296599122,34.8634255387451,46.8720436905246,12.6217249754548,35.2875834090847,89.4518915197774,38.0899325171088,15.2517957448368,11.092215087154,17.3050624849516,34.1911011303064,20.5419275291748,23.8193181901502,22.233564883752,10.4214788053569,9.55706955162387,13.2874995824959,35.464430766136,96.4670868562243,53.8960135648207,52.2336629102571,34.5439050679589,30.234182795895,61.4240532540418,88.1460943001182,18.1653617380594,22.7220355053049,46.2848362714322,32.8752289324412,30.8009970976753,38.2559661122857,22.0904392609443,19.2943006796688,27.3514982532874,14.3014643476139,40.5451792802574,21.1987476971545,21.1176848163109,18.9474238483443,14.2413662410508,23.3014870964929,39.8522111310232,27.568890338078|short_description=p1@SSH2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=85464 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30580 | |||
|TSSclassifier=W | |||
|UniProt=Q76I76 | |||
|association_with_transcript=-15bp_to_ENST00000269033_5end | |||
|description=CAGE_peak_1_at_SSH2_5end | |||
|id=chr17:28257185..28257266,- | |||
|ontology_enrichment_celltype=CL:0000738!7.64e-19!140;CL:0000037!1.11e-16!172;CL:0000566!1.11e-16!172;CL:0002087!9.09e-16!119;CL:0000988!1.13e-14!182;CL:0002031!1.34e-14!124;CL:0002032!2.71e-14!165;CL:0000837!2.71e-14!165;CL:0002057!8.11e-13!42;CL:0000860!3.23e-12!45;CL:0000542!5.25e-09!53;CL:0000051!5.25e-09!53;CL:0000838!5.51e-09!52;CL:0000945!3.76e-08!24;CL:0000826!3.76e-08!24;CL:0000766!1.10e-07!76;CL:0002009!2.64e-07!65;CL:0000557!7.52e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.81e-13;33!CL:0002057;1.81e-13;33!CL:0000473;4.16e-09;39!CL:0000234;4.16e-09;39!CL:0000945;3.70e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.03e-19,136;CL:0000037,9.31e-17,168;CL:0002087,5.86e-16,115;CL:0002031,9.44e-15,120;CL:0000988,1.96e-14,177;CL:0002032,2.36e-14,161;CL:0000837,2.36e-14,161;CL:0000860,8.11e-13,42;CL:0002057,8.11e-13,42;CL:0000473,1.44e-10,48;CL:0000234,1.44e-10,48;CL:0000542,5.25e-09,53;CL:0000051,5.25e-09,53;CL:0000838,5.51e-09,52;CL:0000945,3.76e-08,24;CL:0000826,3.76e-08,24;CL:0000766,8.27e-08,72;CL:0002009,1.87e-07,61;CL:0000557,5.84e-07,67;CL:0002194,7.67e-07,59;CL:0000576,7.67e-07,59;CL:0000040,7.67e-07,59;CL:0000559,7.67e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002791;6.67e-10;32!UBERON:0001893;7.79e-10;34!UBERON:0003528;8.06e-10;34!UBERON:0002020;8.06e-10;34!UBERON:0001869;1.09e-09;32!UBERON:0002780;3.09e-09;41!UBERON:0001890;3.09e-09;41!UBERON:0002619;3.45e-09;22!UBERON:0001950;2.37e-08;20!UBERON:0000956;3.19e-08;25!UBERON:0000203;3.19e-08;25!UBERON:0000073;1.06e-07;53!UBERON:0002616;1.06e-07;53 | |||
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| |||
|short_description=p1@SSH2 | |||
}} |
Revision as of 12:52, 11 September 2013
Short description: | p1@SSH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SSH2_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000269033_5end |
EntrezGene: | SSH2 |
HGNC: | 30580 |
UniProt: | Q76I76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.03e-19 | 136 |
hematopoietic stem cell | 9.31e-17 | 168 |
nongranular leukocyte | 5.86e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 9.44e-15 | 120 |
hematopoietic cell | 1.96e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.36e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.36e-14 | 161 |
classical monocyte | 8.11e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.11e-13 | 42 |
defensive cell | 1.44e-10 | 48 |
phagocyte | 1.44e-10 | 48 |
lymphocyte | 5.25e-09 | 53 |
common lymphoid progenitor | 5.25e-09 | 53 |
lymphoid lineage restricted progenitor cell | 5.51e-09 | 52 |
lymphocyte of B lineage | 3.76e-08 | 24 |
pro-B cell | 3.76e-08 | 24 |
myeloid leukocyte | 8.27e-08 | 72 |
macrophage dendritic cell progenitor | 1.87e-07 | 61 |
granulocyte monocyte progenitor cell | 5.84e-07 | 67 |
monopoietic cell | 7.67e-07 | 59 |
monocyte | 7.67e-07 | 59 |
monoblast | 7.67e-07 | 59 |
promonocyte | 7.67e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.18e-13 | 56 |
neural rod | 3.18e-13 | 56 |
future spinal cord | 3.18e-13 | 56 |
neural keel | 3.18e-13 | 56 |
regional part of nervous system | 1.12e-12 | 53 |
regional part of brain | 1.12e-12 | 53 |
regional part of forebrain | 3.45e-12 | 41 |
forebrain | 3.45e-12 | 41 |
anterior neural tube | 3.45e-12 | 41 |
future forebrain | 3.45e-12 | 41 |
telencephalon | 1.50e-11 | 34 |
adult organism | 2.19e-11 | 114 |
brain grey matter | 2.35e-11 | 34 |
gray matter | 2.35e-11 | 34 |
regional part of telencephalon | 6.94e-11 | 32 |
cerebral hemisphere | 1.18e-10 | 32 |
brain | 2.86e-10 | 68 |
future brain | 2.86e-10 | 68 |
regional part of cerebral cortex | 3.13e-09 | 22 |
neural plate | 9.25e-09 | 82 |
presumptive neural plate | 9.25e-09 | 82 |
central nervous system | 1.11e-08 | 81 |
pre-chordal neural plate | 1.63e-08 | 61 |
neocortex | 2.16e-08 | 20 |
immune system | 3.14e-08 | 93 |
cerebral cortex | 3.23e-08 | 25 |
pallium | 3.23e-08 | 25 |
hemolymphoid system | 2.51e-07 | 108 |
neurectoderm | 2.61e-07 | 86 |
ecto-epithelium | 3.20e-07 | 104 |
nervous system | 6.67e-07 | 89 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.