FFCP PHASE1:Hg19::chr17:46692287..46692317,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3218|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5119|TSSclassifier=S|UniProt=P17481,Q8N8T3|association_with_transcript=0bp_to_NM_024016,uc002inw.2_5end|coexpression_cluster_id=C3646|description=CAGE_peak_7_at_HOXB8_5end|id=chr17:46692287..46692317,-|ontology_enrichment_celltype=CL:1000507!7.93e-12!12;CL:1000494!7.93e-12!12;CL:1000497!1.86e-10!18;CL:0002518!1.86e-10!18;CL:1000449!4.09e-10!16;CL:0002681!1.33e-08!13;CL:0002584!1.33e-08!13|ontology_enrichment_celltype_v019=CL:1000449;2.85e-12;15!CL:0002681;1.35e-11;12!CL:0002584;1.35e-11;12!CL:1000497;1.02e-10;17!CL:0002518;1.02e-10;17!CL:1000507;7.72e-10;10!CL:1000494;7.72e-10;10!CL:0002554;7.09e-09;2|ontology_enrichment_celltype_v019_2=CL:1000449,4.03e-12,15;CL:0002681,2.29e-11,12;CL:0002584,2.29e-11,12;CL:1000497,1.38e-10,17;CL:0002518,1.38e-10,17;CL:1000507,1.04e-09,10;CL:1000494,1.04e-09,10;CL:0002554,3.53e-09,2|ontology_enrichment_development_v019=UBERON:0006241;2.73e-14;3!UBERON:0003057;2.73e-14;3!UBERON:0007297;1.34e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.10e-18!32;UBERON:0003886!3.27e-13!63;UBERON:0002113!3.60e-13!27;UBERON:0003918!3.60e-13!27;UBERON:0005095!3.60e-13!27;UBERON:0007687!3.60e-13!27;UBERON:0000080!1.00e-12!18;UBERON:0002120!1.00e-12!18;UBERON:0004875!1.00e-12!18;UBERON:0005721!1.00e-12!18;UBERON:0005754!1.00e-12!18;UBERON:0007297!1.00e-12!18;UBERON:0002417!2.64e-12!61;UBERON:0000916!2.64e-12!61;UBERON:0002553!5.87e-12!70;UBERON:0003887!7.87e-12!21;UBERON:0009773!7.93e-12!12;UBERON:0001231!7.93e-12!12;UBERON:0004810!7.93e-12!12;UBERON:0006555!2.21e-11!17;UBERON:0005103!2.21e-11!17;UBERON:0000083!2.21e-11!17;UBERON:0009201!2.21e-11!17;UBERON:0004819!2.21e-11!17;UBERON:0006553!2.21e-11!17;UBERON:0003074!2.21e-11!17;UBERON:0003060!2.21e-11!17;UBERON:0004876!4.44e-11!20;UBERON:0006554!6.63e-11!44;UBERON:0000058!6.67e-11!26;UBERON:0001008!1.59e-10!45;UBERON:0005177!3.09e-10!107;UBERON:0004211!4.09e-10!16;UBERON:0001285!4.09e-10!16;UBERON:0007684!4.09e-10!16;UBERON:0003220!4.09e-10!16;UBERON:0004208!4.09e-10!16;UBERON:0005174!4.54e-09!5;UBERON:0001137!4.54e-09!5;UBERON:0000464!7.67e-09!104;UBERON:0005172!9.75e-09!55;UBERON:0005173!9.75e-09!55;UBERON:0001225!1.33e-08!13;UBERON:0008987!1.33e-08!13;UBERON:0003586!3.35e-08!5;UBERON:0009569!1.03e-07!113;UBERON:0003064!1.08e-07!37;UBERON:0000466!1.82e-07!126;UBERON:0003688!9.14e-07!6;UBERON:0002358!9.14e-07!6;UBERON:0003684!9.14e-07!6;UBERON:0001178!9.14e-07!6|ontology_enrichment_uberon_v019=UBERON:0000489;4.58e-15;29!UBERON:0002240;2.73e-14;3!UBERON:0005174;2.73e-14;3!UBERON:0001137;2.73e-14;3!UBERON:0006947;1.31e-13;3!UBERON:0004054;1.31e-13;3!UBERON:0006555;2.85e-12;15!UBERON:0004819;2.85e-12;15!UBERON:0001285;2.85e-12;15!UBERON:0007684;2.85e-12;15!UBERON:0001225;1.35e-11;12!UBERON:0008987;1.35e-11;12!UBERON:0005904;2.56e-10;4!UBERON:0004211;7.72e-10;10!UBERON:0009773;7.72e-10;10!UBERON:0001231;7.72e-10;10!UBERON:0004810;7.72e-10;10!UBERON:0002113;1.79e-09;24!UBERON:0011143;1.79e-09;24!UBERON:0001851;3.73e-09;15!UBERON:0000353;3.73e-09;15!UBERON:0001473;4.41e-08;8!UBERON:0004536;4.41e-08;8!UBERON:0006558;4.41e-08;8!UBERON:0004457;2.17e-07;9!UBERON:0000042;2.17e-07;9!UBERON:0006554;2.46e-07;30!UBERON:0001008;2.46e-07;30!UBERON:0000058;3.74e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0000489,9.53e-20,31;UBERON:0006555,8.75e-15,16;UBERON:0004819,8.75e-15,16;UBERON:0002240,2.74e-14,3;UBERON:0005174,2.74e-14,3;UBERON:0001137,2.74e-14,3;UBERON:0002113,1.19e-13,26;UBERON:0003918,1.19e-13,26;UBERON:0011143,1.19e-13,26;UBERON:0005095,1.19e-13,26;UBERON:0007687,1.19e-13,26;UBERON:0006947,1.52e-13,3;UBERON:0004054,1.52e-13,3;UBERON:0004211,4.03e-12,15;UBERON:0009773,4.03e-12,15;UBERON:0001231,4.03e-12,15;UBERON:0001285,4.03e-12,15;UBERON:0007684,4.03e-12,15;UBERON:0004208,4.03e-12,15;UBERON:0002417,1.16e-11,60;UBERON:0000916,1.16e-11,60;UBERON:0001225,2.29e-11,12;UBERON:0008987,2.29e-11,12;UBERON:0000080,3.57e-11,9;UBERON:0002120,3.57e-11,9;UBERON:0004875,3.57e-11,9;UBERON:0005721,3.57e-11,9;UBERON:0005754,3.57e-11,9;UBERON:0007297,3.57e-11,9;UBERON:0005904,2.86e-10,4;UBERON:0000058,6.92e-10,19;UBERON:0004810,1.04e-09,10;UBERON:0004876,4.32e-09,11;UBERON:0001851,5.63e-09,15;UBERON:0000353,5.63e-09,15;UBERON:0003887,2.61e-08,12;UBERON:0005172,2.79e-08,54;UBERON:0005173,2.79e-08,54;UBERON:0005103,3.30e-08,8;UBERON:0000083,3.30e-08,8;UBERON:0009201,3.30e-08,8;UBERON:0006553,3.30e-08,8;UBERON:0003074,3.30e-08,8;UBERON:0003060,3.30e-08,8;UBERON:0001473,4.33e-08,8;UBERON:0004536,4.33e-08,8;UBERON:0006558,4.33e-08,8;UBERON:0009569,1.21e-07,112;UBERON:0003103,1.71e-07,68;UBERON:0003886,6.65e-07,54;UBERON:0005177,7.86e-07,101;UBERON:0006554,9.83e-07,47|phase1_expression=0,0,1.40954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0.527533956456907,0.74259811776028,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5119 | |||
|TSSclassifier=S | |||
|UniProt=P17481,Q8N8T3 | |||
|association_with_transcript=0bp_to_NM_024016,uc002inw.2_5end | |||
|coexpression_cluster_id=C3646 | |||
|description=CAGE_peak_7_at_HOXB8_5end | |||
|id=chr17:46692287..46692317,- | |||
|ontology_enrichment_celltype=CL:1000507!7.93e-12!12;CL:1000494!7.93e-12!12;CL:1000497!1.86e-10!18;CL:0002518!1.86e-10!18;CL:1000449!4.09e-10!16;CL:0002681!1.33e-08!13;CL:0002584!1.33e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.85e-12;15!CL:0002681;1.35e-11;12!CL:0002584;1.35e-11;12!CL:1000497;1.02e-10;17!CL:0002518;1.02e-10;17!CL:1000507;7.72e-10;10!CL:1000494;7.72e-10;10!CL:0002554;7.09e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,4.03e-12,15;CL:0002681,2.29e-11,12;CL:0002584,2.29e-11,12;CL:1000497,1.38e-10,17;CL:0002518,1.38e-10,17;CL:1000507,1.04e-09,10;CL:1000494,1.04e-09,10;CL:0002554,3.53e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.73e-14;3!UBERON:0003057;2.73e-14;3!UBERON:0007297;1.34e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.10e-18!32;UBERON:0003886!3.27e-13!63;UBERON:0002113!3.60e-13!27;UBERON:0003918!3.60e-13!27;UBERON:0005095!3.60e-13!27;UBERON:0007687!3.60e-13!27;UBERON:0000080!1.00e-12!18;UBERON:0002120!1.00e-12!18;UBERON:0004875!1.00e-12!18;UBERON:0005721!1.00e-12!18;UBERON:0005754!1.00e-12!18;UBERON:0007297!1.00e-12!18;UBERON:0002417!2.64e-12!61;UBERON:0000916!2.64e-12!61;UBERON:0002553!5.87e-12!70;UBERON:0003887!7.87e-12!21;UBERON:0009773!7.93e-12!12;UBERON:0001231!7.93e-12!12;UBERON:0004810!7.93e-12!12;UBERON:0006555!2.21e-11!17;UBERON:0005103!2.21e-11!17;UBERON:0000083!2.21e-11!17;UBERON:0009201!2.21e-11!17;UBERON:0004819!2.21e-11!17;UBERON:0006553!2.21e-11!17;UBERON:0003074!2.21e-11!17;UBERON:0003060!2.21e-11!17;UBERON:0004876!4.44e-11!20;UBERON:0006554!6.63e-11!44;UBERON:0000058!6.67e-11!26;UBERON:0001008!1.59e-10!45;UBERON:0005177!3.09e-10!107;UBERON:0004211!4.09e-10!16;UBERON:0001285!4.09e-10!16;UBERON:0007684!4.09e-10!16;UBERON:0003220!4.09e-10!16;UBERON:0004208!4.09e-10!16;UBERON:0005174!4.54e-09!5;UBERON:0001137!4.54e-09!5;UBERON:0000464!7.67e-09!104;UBERON:0005172!9.75e-09!55;UBERON:0005173!9.75e-09!55;UBERON:0001225!1.33e-08!13;UBERON:0008987!1.33e-08!13;UBERON:0003586!3.35e-08!5;UBERON:0009569!1.03e-07!113;UBERON:0003064!1.08e-07!37;UBERON:0000466!1.82e-07!126;UBERON:0003688!9.14e-07!6;UBERON:0002358!9.14e-07!6;UBERON:0003684!9.14e-07!6;UBERON:0001178!9.14e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;4.58e-15;29!UBERON:0002240;2.73e-14;3!UBERON:0005174;2.73e-14;3!UBERON:0001137;2.73e-14;3!UBERON:0006947;1.31e-13;3!UBERON:0004054;1.31e-13;3!UBERON:0006555;2.85e-12;15!UBERON:0004819;2.85e-12;15!UBERON:0001285;2.85e-12;15!UBERON:0007684;2.85e-12;15!UBERON:0001225;1.35e-11;12!UBERON:0008987;1.35e-11;12!UBERON:0005904;2.56e-10;4!UBERON:0004211;7.72e-10;10!UBERON:0009773;7.72e-10;10!UBERON:0001231;7.72e-10;10!UBERON:0004810;7.72e-10;10!UBERON:0002113;1.79e-09;24!UBERON:0011143;1.79e-09;24!UBERON:0001851;3.73e-09;15!UBERON:0000353;3.73e-09;15!UBERON:0001473;4.41e-08;8!UBERON:0004536;4.41e-08;8!UBERON:0006558;4.41e-08;8!UBERON:0004457;2.17e-07;9!UBERON:0000042;2.17e-07;9!UBERON:0006554;2.46e-07;30!UBERON:0001008;2.46e-07;30!UBERON:0000058;3.74e-07;10 | |||
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|phase1_expression=0,0,1.40954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0.527533956456907,0.74259811776028,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,1.06729878806013,1.00416183829401,0,6.0821768457481,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352303495931295,0,0.280901613404497,0,0,0,0,0,1.82032272387605,1.43723628363248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843881661206331,0.974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,1.41849132023278,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,3.00102312635806,0.813795071099207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,1.40953064181271,1.02341449813341,0.482561763430822,0,1.3878872442239,0,0.492762936082855,0,0.464841513839837,0.120859449591622,0.40101294060657,0,0,0,0,1.35359883872224,0.308061348417659,0,1.46139224653261,0.73886140225013,1.13733384070897,2.38131187387122,0,0,0.541892875087706,1.00337954770971,1.01950509218015,0.831076008928724,2.0148727924996,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,17.0481688083848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0.451191321234361,0.19606253431774,0,0.37950746544837,0,0,0,0,0,0,0,1.83309043480088,0,0.123563938946503,0,0,0,0,0,0,2.91336455440911,3.55125962564451,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,1.13843818411917,0,0,0,0,2.27144668714639,4.81560890920526,0,0,0,0,0,0,0.411125773940253,0.19871461170299,0,1.17330829640882,0.160317640503067,0,0,0.576361668616424,2.29073192331831,1.20116498503375,0,0.248505071130865,0,7.47473133404877,7.11299354923866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0.709251365692784,1.52118305591495,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0.314108192500469,0,0,0,0,0,2.29756690883119,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797525143673985,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0.694567422971502,0,0.179088841081487,0,0,2.47364804324233,0,0,0,0,0,0,0,0,0,0.327609848846413,0,2.3244333569449,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.425149840203366,0,0,0,0,9.60684897942564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0.397832444232549,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0.840816489941367,0,0,0.9555033757741,0,0,6.62576124598314,0.521574816907738,0,0,0,0,0,0.591660003652827,0.340853619036631,3.81048345171836,0,0.31020638566432,3.82215575590973,0,0.196300467230486,0,0,0,0,0.485710993059139,0.935757853848423,0,0,0,0,2.56636834063345,0.154348316215889,0.218559560503957,0.470317296361523,0,8.72003224276016,30.0351954685866,5.34683520588755,13.9476390102522,0,0,0.0644578879735772,0,0.178553938605658,0,0,0.730336388246517,0,0,4.89091842798872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p7@HOXB8 | |||
}} |
Revision as of 14:16, 11 September 2013
Short description: | p7@HOXB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_HOXB8_5end |
Coexpression cluster: | C3646_spinal_alveolar_glioblastoma_somatostatinoma_Endothelial_rhabdomyosarcoma_nonsmall |
Association with transcript: | 0bp_to_NM_024016, uc002inw.2_5end |
EntrezGene: | HOXB8 |
HGNC: | 5119 |
UniProt: | P17481Q8N8T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 4.03e-12 | 15 |
kidney cortical cell | 2.29e-11 | 12 |
renal cortical epithelial cell | 2.29e-11 | 12 |
kidney cell | 1.38e-10 | 17 |
kidney epithelial cell | 1.38e-10 | 17 |
kidney tubule cell | 1.04e-09 | 10 |
nephron tubule epithelial cell | 1.04e-09 | 10 |
fibroblast of lymphatic vessel | 3.53e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.