FFCP PHASE1:Hg19::chr18:11689520..11689566,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2774|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4388|TSSclassifier=S|UniProt=Q86XU3|association_with_transcript=255bp_to_ENST00000334049_5end|description=CAGE_peak_5_at_GNAL_5end|id=chr18:11689520..11689566,+|ontology_enrichment_celltype=CL:0000066!8.01e-08!254;CL:0002076!8.87e-07!43|ontology_enrichment_celltype_v019=CL:0000244;1.31e-08;4!CL:0000731;1.31e-08;4!CL:0000622;1.74e-08;5!CL:0000154;5.56e-07;6|ontology_enrichment_celltype_v019_2=CL:0000244,1.43e-08,4;CL:0000731,1.43e-08,4;CL:0000622,1.43e-08,5;CL:0000066,4.75e-08,253;CL:0000154,4.73e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!1.17e-18!86;UBERON:0003075!7.03e-18!86;UBERON:0007284!7.03e-18!86;UBERON:0007023!1.46e-17!115;UBERON:0001017!6.57e-17!82;UBERON:0004121!3.40e-16!169;UBERON:0002346!4.40e-16!90;UBERON:0000153!4.67e-16!129;UBERON:0007811!4.67e-16!129;UBERON:0000033!5.41e-16!123;UBERON:0000481!1.89e-15!347;UBERON:0001049!2.07e-15!57;UBERON:0005068!2.07e-15!57;UBERON:0006241!2.07e-15!57;UBERON:0007135!2.07e-15!57;UBERON:0000073!2.78e-15!94;UBERON:0001016!2.78e-15!94;UBERON:0000924!4.31e-15!173;UBERON:0006601!4.31e-15!173;UBERON:0003056!5.61e-14!61;UBERON:0000064!1.46e-13!219;UBERON:0001869!5.33e-12!32;UBERON:0000955!5.44e-12!69;UBERON:0006238!5.44e-12!69;UBERON:0003080!5.50e-12!42;UBERON:0002616!1.10e-11!59;UBERON:0001893!1.26e-11!34;UBERON:0002020!1.57e-11!34;UBERON:0003528!1.57e-11!34;UBERON:0002780!2.13e-11!41;UBERON:0001890!2.13e-11!41;UBERON:0006240!2.13e-11!41;UBERON:0002791!4.55e-11!33;UBERON:0001004!6.31e-11!72;UBERON:0004119!8.14e-11!169;UBERON:0000925!8.14e-11!169;UBERON:0006595!8.14e-11!169;UBERON:0000956!9.48e-11!25;UBERON:0000203!9.48e-11!25;UBERON:0000922!1.24e-10!612;UBERON:0001950!1.39e-10!20;UBERON:0000475!3.55e-10!365;UBERON:0002619!5.42e-10!22;UBERON:0004921!2.50e-09!129;UBERON:0004185!2.50e-09!129;UBERON:0001737!3.95e-09!9;UBERON:0000063!4.14e-09!97;UBERON:0002050!7.55e-09!605;UBERON:0005423!7.55e-09!605;UBERON:0001007!9.58e-09!155;UBERON:0001555!9.58e-09!155;UBERON:0007026!9.58e-09!155;UBERON:0000923!1.34e-08!604;UBERON:0005291!1.34e-08!604;UBERON:0006598!1.34e-08!604;UBERON:0002532!1.34e-08!604;UBERON:0000468!1.46e-08!659;UBERON:0000077!1.60e-08!130;UBERON:0008947!1.68e-08!38;UBERON:0003258!1.68e-08!38;UBERON:0000065!1.74e-08!53;UBERON:0000062!1.86e-08!511;UBERON:0000467!4.69e-08!625;UBERON:0000480!6.09e-08!626;UBERON:0000119!2.40e-07!312;UBERON:0001041!2.73e-07!98;UBERON:0000483!5.96e-07!309;UBERON:0000477!8.39e-07!286;UBERON:0000072!9.54e-07!46|ontology_enrichment_uberon_v019=UBERON:0001737;1.36e-16;9!UBERON:0001557;1.36e-16;9!UBERON:0000365;5.32e-10;5!UBERON:0005910;3.25e-08;6!UBERON:0001869;1.84e-07;32!UBERON:0001950;9.42e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.56e-16,9;UBERON:0010371,6.26e-11,104;UBERON:0000365,6.90e-10,5;UBERON:0011216,3.96e-09,223;UBERON:0003075,4.07e-09,82;UBERON:0007284,4.07e-09,82;UBERON:0002346,2.36e-08,86;UBERON:0005910,4.01e-08,6;UBERON:0001869,4.26e-08,32;UBERON:0000073,5.02e-08,53;UBERON:0002616,5.02e-08,53;UBERON:0001557,5.24e-08,19;UBERON:0004121,6.14e-08,171;UBERON:0000924,6.14e-08,171;UBERON:0006601,6.14e-08,171;UBERON:0003056,1.00e-07,61;UBERON:0003528,1.90e-07,34;UBERON:0002020,1.90e-07,34;UBERON:0001893,2.03e-07,34;UBERON:0002780,2.34e-07,41;UBERON:0001890,2.34e-07,41;UBERON:0003080,2.34e-07,41;UBERON:0006240,2.34e-07,41;UBERON:0001049,2.50e-07,56;UBERON:0005068,2.50e-07,56;UBERON:0006241,2.50e-07,56;UBERON:0007135,2.50e-07,56;UBERON:0002791,5.45e-07,32;UBERON:0001950,8.19e-07,20|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,1.43117993565528,0.136874425072884,0.251085279189606,0,0,0,0,0,0,4.59710612239464,0.30120591877825,3.69754010166788,3.56349122669387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01392563272577,0,0,1.13441780596881,0.443458794925128,0.175669571386252,0.916853528483988,7.65020105414339,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,1.3082821564276,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.421352420106746,0,0.245668634623536,0.103325781175765,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.966304265816484,0.545492241181669,0.860413786167011,0.487894824518382,1.19276791489337,0.69716365721711,0.414644220061482,1.7662459561294,0.72995471815166,0,0,0,0,0,3.54920400119532,5.56329477257736,6.50729780685401,4.08087699109858,6.53638332277218,6.16903609688851,4.31460186112526,4.31687223275761,4.23221872641029,0,0,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458729283404541,0,0,1.08786384305464,2.18175345170189,0,0,0.924351257262837,0,0,0.327796715891087,0,0.101988829741982,0,0.18378979906969,0.50141507858475,0.454672189309436,0,1.65833887891756,0.20686599172379,0.426467963801962,0.23806443146374,0.0645889098360061,0.248298857183432,0,0.190941474834495,0,1.30630048738177,0,0.80822463617505,2.51027718874367,0.99798106963804,2.03508171527436,0,0,0.269475606319761,0,0.733448665097199,0.813792356631477,1.33151354837103,0.603821380773079,0|short_description=p5@GNAL}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2774 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4388 | |||
|TSSclassifier=S | |||
|UniProt=Q86XU3 | |||
|association_with_transcript=255bp_to_ENST00000334049_5end | |||
|description=CAGE_peak_5_at_GNAL_5end | |||
|id=chr18:11689520..11689566,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.01e-08!254;CL:0002076!8.87e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.31e-08;4!CL:0000731;1.31e-08;4!CL:0000622;1.74e-08;5!CL:0000154;5.56e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.43e-08,4;CL:0000731,1.43e-08,4;CL:0000622,1.43e-08,5;CL:0000066,4.75e-08,253;CL:0000154,4.73e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.17e-18!86;UBERON:0003075!7.03e-18!86;UBERON:0007284!7.03e-18!86;UBERON:0007023!1.46e-17!115;UBERON:0001017!6.57e-17!82;UBERON:0004121!3.40e-16!169;UBERON:0002346!4.40e-16!90;UBERON:0000153!4.67e-16!129;UBERON:0007811!4.67e-16!129;UBERON:0000033!5.41e-16!123;UBERON:0000481!1.89e-15!347;UBERON:0001049!2.07e-15!57;UBERON:0005068!2.07e-15!57;UBERON:0006241!2.07e-15!57;UBERON:0007135!2.07e-15!57;UBERON:0000073!2.78e-15!94;UBERON:0001016!2.78e-15!94;UBERON:0000924!4.31e-15!173;UBERON:0006601!4.31e-15!173;UBERON:0003056!5.61e-14!61;UBERON:0000064!1.46e-13!219;UBERON:0001869!5.33e-12!32;UBERON:0000955!5.44e-12!69;UBERON:0006238!5.44e-12!69;UBERON:0003080!5.50e-12!42;UBERON:0002616!1.10e-11!59;UBERON:0001893!1.26e-11!34;UBERON:0002020!1.57e-11!34;UBERON:0003528!1.57e-11!34;UBERON:0002780!2.13e-11!41;UBERON:0001890!2.13e-11!41;UBERON:0006240!2.13e-11!41;UBERON:0002791!4.55e-11!33;UBERON:0001004!6.31e-11!72;UBERON:0004119!8.14e-11!169;UBERON:0000925!8.14e-11!169;UBERON:0006595!8.14e-11!169;UBERON:0000956!9.48e-11!25;UBERON:0000203!9.48e-11!25;UBERON:0000922!1.24e-10!612;UBERON:0001950!1.39e-10!20;UBERON:0000475!3.55e-10!365;UBERON:0002619!5.42e-10!22;UBERON:0004921!2.50e-09!129;UBERON:0004185!2.50e-09!129;UBERON:0001737!3.95e-09!9;UBERON:0000063!4.14e-09!97;UBERON:0002050!7.55e-09!605;UBERON:0005423!7.55e-09!605;UBERON:0001007!9.58e-09!155;UBERON:0001555!9.58e-09!155;UBERON:0007026!9.58e-09!155;UBERON:0000923!1.34e-08!604;UBERON:0005291!1.34e-08!604;UBERON:0006598!1.34e-08!604;UBERON:0002532!1.34e-08!604;UBERON:0000468!1.46e-08!659;UBERON:0000077!1.60e-08!130;UBERON:0008947!1.68e-08!38;UBERON:0003258!1.68e-08!38;UBERON:0000065!1.74e-08!53;UBERON:0000062!1.86e-08!511;UBERON:0000467!4.69e-08!625;UBERON:0000480!6.09e-08!626;UBERON:0000119!2.40e-07!312;UBERON:0001041!2.73e-07!98;UBERON:0000483!5.96e-07!309;UBERON:0000477!8.39e-07!286;UBERON:0000072!9.54e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.36e-16;9!UBERON:0001557;1.36e-16;9!UBERON:0000365;5.32e-10;5!UBERON:0005910;3.25e-08;6!UBERON:0001869;1.84e-07;32!UBERON:0001950;9.42e-07;20 | |||
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| |||
|short_description=p5@GNAL | |||
}} |
Revision as of 16:50, 11 September 2013
Short description: | p5@GNAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GNAL_5end |
Coexpression cluster: | NA |
Association with transcript: | 255bp_to_ENST00000334049_5end |
EntrezGene: | GNAL |
HGNC: | 4388 |
UniProt: | Q86XU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.43e-08 | 4 |
urothelial cell | 1.43e-08 | 4 |
acinar cell | 1.43e-08 | 5 |
epithelial cell | 4.75e-08 | 253 |
protein secreting cell | 4.73e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.56e-16 | 9 |
ecto-epithelium | 6.26e-11 | 104 |
urothelium | 6.90e-10 | 5 |
organ system subdivision | 3.96e-09 | 223 |
neural plate | 4.07e-09 | 82 |
presumptive neural plate | 4.07e-09 | 82 |
neurectoderm | 2.36e-08 | 86 |
transitional epithelium | 4.01e-08 | 6 |
cerebral hemisphere | 4.26e-08 | 32 |
regional part of nervous system | 5.02e-08 | 53 |
regional part of brain | 5.02e-08 | 53 |
upper respiratory tract | 5.24e-08 | 19 |
ectoderm-derived structure | 6.14e-08 | 171 |
ectoderm | 6.14e-08 | 171 |
presumptive ectoderm | 6.14e-08 | 171 |
pre-chordal neural plate | 1.00e-07 | 61 |
brain grey matter | 1.90e-07 | 34 |
gray matter | 1.90e-07 | 34 |
telencephalon | 2.03e-07 | 34 |
regional part of forebrain | 2.34e-07 | 41 |
forebrain | 2.34e-07 | 41 |
anterior neural tube | 2.34e-07 | 41 |
future forebrain | 2.34e-07 | 41 |
neural tube | 2.50e-07 | 56 |
neural rod | 2.50e-07 | 56 |
future spinal cord | 2.50e-07 | 56 |
neural keel | 2.50e-07 | 56 |
regional part of telencephalon | 5.45e-07 | 32 |
neocortex | 8.19e-07 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.