FFCP PHASE1:Hg19::chr2:46605104..46605115,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:46605104..46605115,+|id=chr2:46605104..46605115,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002541;7.53e-16;3!CL:0002188;9.69e-10;5!CL:1000746;3.35e-07;7!CL:1000612;3.35e-07;7|ontology_enrichment_celltype_v019_2=CL:0002541,5.80e-16,3;CL:0002188,1.06e-09,5;CL:1000746,3.56e-07,7;CL:1000612,3.56e-07,7|ontology_enrichment_development_v019=UBERON:0010226;7.88e-13;1!UBERON:0003124;2.46e-12;1!UBERON:0010227;2.46e-12;1!UBERON:0005754;2.46e-12;1!UBERON:0007297;8.52e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.32e-12!115;UBERON:0000477!6.86e-11!286;UBERON:0004111!6.63e-08!241;UBERON:0003937!2.05e-07!12;UBERON:0005399!2.05e-07!12;UBERON:0000481!4.17e-07!347;UBERON:0000483!5.45e-07!309|ontology_enrichment_uberon_v019=UBERON:0004151;6.25e-16;3!UBERON:0003124;7.53e-16;3!UBERON:0000920;7.53e-16;3!UBERON:0002084;7.88e-13;1!UBERON:0002082;7.88e-13;1!UBERON:0002079;2.46e-12;1!UBERON:0000998;2.46e-12;1!UBERON:0006868;2.46e-12;1!UBERON:0000074;3.35e-07;7!UBERON:0001229;3.35e-07;7!UBERON:0002081;8.52e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004151,5.38e-16,3;UBERON:0000920,5.80e-16,3;UBERON:0003124,5.82e-15,7;UBERON:0002084,7.89e-13,1;UBERON:0002082,7.89e-13,1;UBERON:0010226,7.89e-13,1;UBERON:0002079,1.96e-12,1;UBERON:0000998,3.08e-12,1;UBERON:0006868,3.08e-12,1;UBERON:0000080,1.63e-11,9;UBERON:0002120,1.63e-11,9;UBERON:0004875,1.63e-11,9;UBERON:0005721,1.63e-11,9;UBERON:0005754,1.63e-11,9;UBERON:0007297,1.63e-11,9;UBERON:0004876,1.60e-09,11;UBERON:0003887,9.01e-09,12;UBERON:0005631,9.46e-08,14;UBERON:0000158,9.46e-08,14;UBERON:0010532,3.56e-07,7;UBERON:0000074,3.56e-07,7;UBERON:0001229,3.56e-07,7;UBERON:0001230,3.56e-07,7;UBERON:0003220,3.56e-07,7;UBERON:0005749,3.56e-07,7;UBERON:0004199,3.56e-07,7;UBERON:0004209,3.56e-07,7;UBERON:0004198,3.56e-07,7;UBERON:0002081,7.61e-07,2;UBERON:0010227,7.61e-07,2|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.783556884599516,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.12786256184353,0,1.00267582127178,0.724232594804119,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0.550236083880135,0.208994966536811,0.775250277507987,0.35576626268671,0,0,0.760272105718513,1.22031028774085,0,0,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0.340296549480063,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0.721879481669586,0.236613600079688,0.337169380156203,0,0,0,0.237270619111097,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0.387815147273333,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,1.60586089917446,0.157702415033935,0.35142424497814,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0.34444334449382,0.728364672026868,0.393373244878272,0,0.0770153371044148,0,0,0,1.13733384070897,0.340187410553031,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,1.30151357865721,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.762520775695299,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0.591860433821602,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0.10893846351899,0,0.307801034015188,0.341826167541004,0,0.089757644409772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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:46605104..46605115,+ | |||
|id=chr2:46605104..46605115,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.53e-16;3!CL:0002188;9.69e-10;5!CL:1000746;3.35e-07;7!CL:1000612;3.35e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.80e-16,3;CL:0002188,1.06e-09,5;CL:1000746,3.56e-07,7;CL:1000612,3.56e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0010226;7.88e-13;1!UBERON:0003124;2.46e-12;1!UBERON:0010227;2.46e-12;1!UBERON:0005754;2.46e-12;1!UBERON:0007297;8.52e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-12!115;UBERON:0000477!6.86e-11!286;UBERON:0004111!6.63e-08!241;UBERON:0003937!2.05e-07!12;UBERON:0005399!2.05e-07!12;UBERON:0000481!4.17e-07!347;UBERON:0000483!5.45e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.25e-16;3!UBERON:0003124;7.53e-16;3!UBERON:0000920;7.53e-16;3!UBERON:0002084;7.88e-13;1!UBERON:0002082;7.88e-13;1!UBERON:0002079;2.46e-12;1!UBERON:0000998;2.46e-12;1!UBERON:0006868;2.46e-12;1!UBERON:0000074;3.35e-07;7!UBERON:0001229;3.35e-07;7!UBERON:0002081;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,5.38e-16,3;UBERON:0000920,5.80e-16,3;UBERON:0003124,5.82e-15,7;UBERON:0002084,7.89e-13,1;UBERON:0002082,7.89e-13,1;UBERON:0010226,7.89e-13,1;UBERON:0002079,1.96e-12,1;UBERON:0000998,3.08e-12,1;UBERON:0006868,3.08e-12,1;UBERON:0000080,1.63e-11,9;UBERON:0002120,1.63e-11,9;UBERON:0004875,1.63e-11,9;UBERON:0005721,1.63e-11,9;UBERON:0005754,1.63e-11,9;UBERON:0007297,1.63e-11,9;UBERON:0004876,1.60e-09,11;UBERON:0003887,9.01e-09,12;UBERON:0005631,9.46e-08,14;UBERON:0000158,9.46e-08,14;UBERON:0010532,3.56e-07,7;UBERON:0000074,3.56e-07,7;UBERON:0001229,3.56e-07,7;UBERON:0001230,3.56e-07,7;UBERON:0003220,3.56e-07,7;UBERON:0005749,3.56e-07,7;UBERON:0004199,3.56e-07,7;UBERON:0004209,3.56e-07,7;UBERON:0004198,3.56e-07,7;UBERON:0002081,7.61e-07,2;UBERON:0010227,7.61e-07,2 | |||
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| |||
|short_description=p@chr2:46605104..46605115,+ | |||
}} |
Revision as of 18:47, 12 September 2013
Short description: | p@chr2:46605104..46605115, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:46605104..46605115, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.80e-16 | 3 |
glomerular endothelial cell | 1.06e-09 | 5 |
glomerular cell | 3.56e-07 | 7 |
kidney corpuscule cell | 3.56e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 5.38e-16 | 3 |
egg chorion | 5.80e-16 | 3 |
chorion | 5.82e-15 | 7 |
heart left ventricle | 7.89e-13 | 1 |
cardiac ventricle | 7.89e-13 | 1 |
future cardiac ventricle | 7.89e-13 | 1 |
left cardiac atrium | 1.96e-12 | 1 |
seminal vesicle | 3.08e-12 | 1 |
seminal fluid secreting gland | 3.08e-12 | 1 |
mesonephros | 1.63e-11 | 9 |
pronephros | 1.63e-11 | 9 |
nephrogenic cord | 1.63e-11 | 9 |
pronephric mesoderm | 1.63e-11 | 9 |
rostral part of nephrogenic cord | 1.63e-11 | 9 |
presumptive pronephric mesoderm | 1.63e-11 | 9 |
urogenital ridge | 1.60e-09 | 11 |
intraembryonic coelom | 9.01e-09 | 12 |
extraembryonic membrane | 9.46e-08 | 14 |
membranous layer | 9.46e-08 | 14 |
primitive nephron | 3.56e-07 | 7 |
renal glomerulus | 3.56e-07 | 7 |
renal corpuscle | 3.56e-07 | 7 |
glomerular capsule | 3.56e-07 | 7 |
metanephric mesenchyme | 3.56e-07 | 7 |
glomerular tuft | 3.56e-07 | 7 |
S-shaped body | 3.56e-07 | 7 |
renal vesicle | 3.56e-07 | 7 |
comma-shaped body | 3.56e-07 | 7 |
cardiac atrium | 7.61e-07 | 2 |
future cardiac atrium | 7.61e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.