FFCP PHASE1:Hg19::chr2:110873631..110873652,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7851|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6818|TSSclassifier=S|UniProt=C9IZ55|association_with_transcript=-32bp_to_ENST00000427178_5end|description=CAGE_peak_5_at_MALL_5end|id=chr2:110873631..110873652,-|ontology_enrichment_celltype=CL:0002139!2.58e-23!24;CL:0000071!1.75e-20!18;CL:0002546!1.75e-20!18;CL:0000115!2.09e-19!35;CL:0002078!3.57e-19!44;CL:0000213!5.39e-13!57;CL:0000215!5.39e-13!57;CL:1000413!8.31e-11!9;CL:0000222!1.19e-09!119;CL:0002543!1.66e-08!6;CL:0002544!1.14e-07!6;CL:0000499!3.90e-07!27|ontology_enrichment_celltype_v019=CL:0002139;1.15e-43;24!CL:0000071;1.52e-41;18!CL:0000115;2.39e-31;36!CL:0002543;1.94e-22;6!CL:1000413;1.77e-18;9!CL:0002078;2.76e-18;45!CL:0000213;9.46e-15;58!CL:0000215;9.46e-15;58!CL:0002618;2.49e-12;3!CL:0002544;9.37e-10;6!CL:0000138;3.25e-09;6!CL:1000746;4.00e-08;7!CL:1000612;4.00e-08;7!CL:0000650;7.00e-08;2!CL:1000500;7.00e-08;2!CL:1000618;7.00e-08;2!CL:1001318;7.00e-08;2!CL:0002173;7.00e-08;2|ontology_enrichment_celltype_v019_2=CL:0002139,8.01e-44,24;CL:0000071,7.22e-42,18;CL:0002546,7.22e-42,18;CL:0000115,1.96e-38,36;CL:0002078,1.26e-29,45;CL:0002543,1.81e-22,6;CL:0000213,9.56e-22,58;CL:0000215,9.56e-22,58;CL:1000413,1.26e-18,9;CL:0002618,2.45e-12,3;CL:0000222,1.02e-10,121;CL:0002544,7.06e-10,6;CL:0000076,2.50e-09,63;CL:0000058,3.98e-09,6;CL:0000138,3.98e-09,6;CL:1000746,3.64e-08,7;CL:1000612,3.64e-08,7;CL:0000650,9.42e-08,2;CL:1000500,9.42e-08,2;CL:1000618,9.42e-08,2;CL:1001318,9.42e-08,2;CL:0002173,9.42e-08,2|ontology_enrichment_development_v019=CL:0002546;1.52e-41;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.75e-20!18;UBERON:0004638!1.75e-20!18;UBERON:0004852!1.75e-20!18;UBERON:0000487!2.65e-19!22;UBERON:0006914!3.88e-19!25;UBERON:0002049!4.34e-15!79;UBERON:0007798!4.34e-15!79;UBERON:0000055!1.40e-14!69;UBERON:0001009!9.68e-13!113;UBERON:0003914!1.13e-12!118;UBERON:0001981!5.79e-12!60;UBERON:0007500!5.79e-12!60;UBERON:0004537!5.79e-12!60;UBERON:0006965!5.79e-12!60;UBERON:0004535!1.88e-11!110;UBERON:0003915!8.31e-11!9;UBERON:0004700!8.31e-11!9;UBERON:0001917!8.31e-11!9;UBERON:0004872!1.19e-10!84;UBERON:0004111!3.23e-10!241;UBERON:0000483!6.06e-10!309;UBERON:0000119!1.37e-09!312;UBERON:0000477!2.09e-09!286;UBERON:0000467!3.56e-09!625;UBERON:0000480!4.39e-09!626;UBERON:0001638!2.77e-08!9;UBERON:0003920!2.77e-08!9;UBERON:0004582!2.77e-08!9;UBERON:0000468!3.01e-08!659;UBERON:0000025!6.22e-08!194;UBERON:0000490!1.30e-07!138|ontology_enrichment_uberon_v019=UBERON:0004638;1.52e-41;18!UBERON:0001986;1.52e-41;18!UBERON:0004852;1.52e-41;18!UBERON:0000487;2.75e-38;22!UBERON:0006914;3.42e-33;25!UBERON:0000490;5.47e-22;33!UBERON:0003915;1.77e-18;9!UBERON:0004700;1.77e-18;9!UBERON:0001917;1.77e-18;9!UBERON:0001638;1.05e-14;9!UBERON:0003920;1.05e-14;9!UBERON:0004582;1.05e-14;9!UBERON:0007500;4.03e-13;56!UBERON:0001981;4.03e-13;56!UBERON:0004537;4.03e-13;56!UBERON:0000055;1.02e-11;65!UBERON:0003914;2.85e-10;74!UBERON:0000025;1.81e-08;93!UBERON:0000074;4.00e-08;7!UBERON:0001229;4.00e-08;7!UBERON:0003567;7.00e-08;2!UBERON:0003838;7.00e-08;2!UBERON:0003586;7.00e-08;2!UBERON:0005169;7.00e-08;2!UBERON:0002321;7.00e-08;2!UBERON:0005215;7.00e-08;2!UBERON:0002303;7.00e-08;2!UBERON:0002319;7.00e-08;2!UBERON:0002049;7.09e-08;75!UBERON:0007798;7.09e-08;75!UBERON:0002066;1.55e-07;5!UBERON:0002108;2.88e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.22e-42,18;UBERON:0001986,7.22e-42,18;UBERON:0004852,7.22e-42,18;UBERON:0000487,1.46e-38,22;UBERON:0006914,1.97e-33,25;UBERON:0000055,1.29e-19,68;UBERON:0003915,1.26e-18,9;UBERON:0004700,1.26e-18,9;UBERON:0001917,1.26e-18,9;UBERON:0007500,3.81e-17,59;UBERON:0001981,3.81e-17,59;UBERON:0004537,3.81e-17,59;UBERON:0006965,3.81e-17,59;UBERON:0002049,2.22e-16,78;UBERON:0007798,2.22e-16,78;UBERON:0001638,1.00e-14,9;UBERON:0003920,1.00e-14,9;UBERON:0004582,1.00e-14,9;UBERON:0003914,6.59e-14,117;UBERON:0004872,7.96e-11,83;UBERON:0004535,3.52e-10,109;UBERON:0001009,9.10e-10,112;UBERON:0010532,3.64e-08,7;UBERON:0000074,3.64e-08,7;UBERON:0001229,3.64e-08,7;UBERON:0001230,3.64e-08,7;UBERON:0003220,3.64e-08,7;UBERON:0005749,3.64e-08,7;UBERON:0004199,3.64e-08,7;UBERON:0004209,3.64e-08,7;UBERON:0004198,3.64e-08,7;UBERON:0000025,3.73e-08,192;UBERON:0003567,9.42e-08,2;UBERON:0003838,9.42e-08,2;UBERON:0003586,9.42e-08,2;UBERON:0005169,9.42e-08,2;UBERON:0002321,9.42e-08,2;UBERON:0005215,9.42e-08,2;UBERON:0002303,9.42e-08,2;UBERON:0002319,9.42e-08,2;UBERON:0004111,1.00e-07,240;UBERON:0002066,1.54e-07,5;UBERON:0002108,3.10e-07,4;UBERON:0005103,3.82e-07,8;UBERON:0000083,3.82e-07,8;UBERON:0009201,3.82e-07,8;UBERON:0006553,3.82e-07,8;UBERON:0003074,3.82e-07,8;UBERON:0003060,3.82e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.618831764800233,0,0,0,0,0,0.369363174230364,1.02000345622126,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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0,0.201273793591026,0|short_description=p5@MALL}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6818 | |||
|TSSclassifier=S | |||
|UniProt=C9IZ55 | |||
|association_with_transcript=-32bp_to_ENST00000427178_5end | |||
|description=CAGE_peak_5_at_MALL_5end | |||
|id=chr2:110873631..110873652,- | |||
|ontology_enrichment_celltype=CL:0002139!2.58e-23!24;CL:0000071!1.75e-20!18;CL:0002546!1.75e-20!18;CL:0000115!2.09e-19!35;CL:0002078!3.57e-19!44;CL:0000213!5.39e-13!57;CL:0000215!5.39e-13!57;CL:1000413!8.31e-11!9;CL:0000222!1.19e-09!119;CL:0002543!1.66e-08!6;CL:0002544!1.14e-07!6;CL:0000499!3.90e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.15e-43;24!CL:0000071;1.52e-41;18!CL:0000115;2.39e-31;36!CL:0002543;1.94e-22;6!CL:1000413;1.77e-18;9!CL:0002078;2.76e-18;45!CL:0000213;9.46e-15;58!CL:0000215;9.46e-15;58!CL:0002618;2.49e-12;3!CL:0002544;9.37e-10;6!CL:0000138;3.25e-09;6!CL:1000746;4.00e-08;7!CL:1000612;4.00e-08;7!CL:0000650;7.00e-08;2!CL:1000500;7.00e-08;2!CL:1000618;7.00e-08;2!CL:1001318;7.00e-08;2!CL:0002173;7.00e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.01e-44,24;CL:0000071,7.22e-42,18;CL:0002546,7.22e-42,18;CL:0000115,1.96e-38,36;CL:0002078,1.26e-29,45;CL:0002543,1.81e-22,6;CL:0000213,9.56e-22,58;CL:0000215,9.56e-22,58;CL:1000413,1.26e-18,9;CL:0002618,2.45e-12,3;CL:0000222,1.02e-10,121;CL:0002544,7.06e-10,6;CL:0000076,2.50e-09,63;CL:0000058,3.98e-09,6;CL:0000138,3.98e-09,6;CL:1000746,3.64e-08,7;CL:1000612,3.64e-08,7;CL:0000650,9.42e-08,2;CL:1000500,9.42e-08,2;CL:1000618,9.42e-08,2;CL:1001318,9.42e-08,2;CL:0002173,9.42e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.52e-41;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.75e-20!18;UBERON:0004638!1.75e-20!18;UBERON:0004852!1.75e-20!18;UBERON:0000487!2.65e-19!22;UBERON:0006914!3.88e-19!25;UBERON:0002049!4.34e-15!79;UBERON:0007798!4.34e-15!79;UBERON:0000055!1.40e-14!69;UBERON:0001009!9.68e-13!113;UBERON:0003914!1.13e-12!118;UBERON:0001981!5.79e-12!60;UBERON:0007500!5.79e-12!60;UBERON:0004537!5.79e-12!60;UBERON:0006965!5.79e-12!60;UBERON:0004535!1.88e-11!110;UBERON:0003915!8.31e-11!9;UBERON:0004700!8.31e-11!9;UBERON:0001917!8.31e-11!9;UBERON:0004872!1.19e-10!84;UBERON:0004111!3.23e-10!241;UBERON:0000483!6.06e-10!309;UBERON:0000119!1.37e-09!312;UBERON:0000477!2.09e-09!286;UBERON:0000467!3.56e-09!625;UBERON:0000480!4.39e-09!626;UBERON:0001638!2.77e-08!9;UBERON:0003920!2.77e-08!9;UBERON:0004582!2.77e-08!9;UBERON:0000468!3.01e-08!659;UBERON:0000025!6.22e-08!194;UBERON:0000490!1.30e-07!138 | |||
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| |||
|short_description=p5@MALL | |||
}} |
Revision as of 12:56, 12 September 2013
Short description: | p5@MALL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MALL_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000427178_5end |
EntrezGene: | MALL |
HGNC: | 6818 |
UniProt: | C9IZ55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.01e-44 | 24 |
blood vessel endothelial cell | 7.22e-42 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.22e-42 | 18 |
endothelial cell | 1.96e-38 | 36 |
meso-epithelial cell | 1.26e-29 | 45 |
vein endothelial cell | 1.81e-22 | 6 |
lining cell | 9.56e-22 | 58 |
barrier cell | 9.56e-22 | 58 |
endothelial cell of artery | 1.26e-18 | 9 |
endothelial cell of umbilical vein | 2.45e-12 | 3 |
mesodermal cell | 1.02e-10 | 121 |
aortic endothelial cell | 7.06e-10 | 6 |
squamous epithelial cell | 2.50e-09 | 63 |
chondroblast | 3.98e-09 | 6 |
chondrocyte | 3.98e-09 | 6 |
glomerular cell | 3.64e-08 | 7 |
kidney corpuscule cell | 3.64e-08 | 7 |
mesangial cell | 9.42e-08 | 2 |
kidney interstitial cell | 9.42e-08 | 2 |
juxtaglomerular complex cell | 9.42e-08 | 2 |
renal interstitial pericyte | 9.42e-08 | 2 |
extraglomerular mesangial cell | 9.42e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.