FFCP PHASE1:Hg19::chr20:48124348..48124365,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C517|description=CAGE_peak_at_chr20:48124348..48124365,-|id=chr20:48124348..48124365,-|ontology_enrichment_celltype=CL:0000057!6.10e-15!75;CL:0000055!4.19e-10!180;CL:0002334!8.54e-10!12;CL:1000306!2.25e-07!4;CL:0002547!2.25e-07!4|ontology_enrichment_celltype_v019=CL:0000135;4.13e-25;3!CL:0000388;4.13e-25;3!CL:0000214;1.18e-12;3!CL:0002334;3.01e-11;12!CL:0002581;6.87e-10;1!CL:0002616;6.87e-10;1!CL:1000306;2.08e-09;4!CL:0002547;2.08e-09;4!CL:0000499;2.31e-07;28|ontology_enrichment_celltype_v019_2=CL:0000135,2.21e-25,3;CL:0000388,2.21e-25,3;CL:0000214,1.15e-12,3;CL:0000057,2.44e-11,76;CL:0002334,2.66e-11,12;CL:0002581,5.79e-10,1;CL:0002616,6.31e-10,1;CL:1000306,2.57e-09,4;CL:0002547,2.57e-09,4;CL:0000499,2.07e-07,28|ontology_enrichment_development_v019=UBERON:0006242;1.55e-09;1!UBERON:0003099;1.55e-09;1!UBERON:0003852;1.55e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004573!2.52e-08!33;UBERON:0004571!2.52e-08!33;UBERON:0001637!1.85e-07!42;UBERON:0003509!1.85e-07!42;UBERON:0004572!1.85e-07!42;UBERON:0000415!2.25e-07!4;UBERON:0007240!2.25e-07!4;UBERON:0005742!2.25e-07!4;UBERON:0005734!2.25e-07!4;UBERON:0004664!2.25e-07!4;UBERON:0004663!2.25e-07!4;UBERON:0007100!6.87e-07!27;UBERON:0004458!8.19e-07!49|ontology_enrichment_uberon_v019=UBERON:0007846;4.13e-25;3!UBERON:0000043;4.13e-25;3!UBERON:0007845;4.13e-25;3!UBERON:0005406;4.84e-18;2!UBERON:0004457;2.81e-15;9!UBERON:0000042;2.81e-15;9!UBERON:0006915;1.18e-12;3!UBERON:0007616;1.18e-12;3!UBERON:0002217;1.18e-12;3!UBERON:0002018;1.18e-12;3!UBERON:0005705;1.55e-09;1!UBERON:0008193;1.55e-09;1!UBERON:0010912;1.55e-09;1!UBERON:0002514;1.55e-09;1!UBERON:0003457;1.55e-09;1!UBERON:0008907;1.55e-09;1!UBERON:0008001;1.55e-09;1!UBERON:0007213;1.55e-09;1!UBERON:0009891;1.55e-09;1!UBERON:0007914;1.55e-09;1!UBERON:0007375;1.55e-09;1!UBERON:0003323;1.55e-09;1!UBERON:0010258;1.55e-09;1!UBERON:0005253;1.55e-09;1!UBERON:0007842;1.55e-09;1!UBERON:0002397;1.55e-09;1!UBERON:0003113;1.55e-09;1!UBERON:0003277;1.55e-09;1!UBERON:0001709;1.55e-09;1!UBERON:0002244;1.55e-09;1!UBERON:0005620;1.55e-09;1!UBERON:0010364;1.55e-09;1!UBERON:0004288;1.55e-09;1!UBERON:0004797;2.08e-09;4!UBERON:0000415;2.08e-09;4!UBERON:0007240;2.08e-09;4!UBERON:0005742;2.08e-09;4!UBERON:0005734;2.08e-09;4!UBERON:0004664;2.08e-09;4!UBERON:0004663;2.08e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.21e-25,3;UBERON:0000043,2.21e-25,3;UBERON:0007845,2.21e-25,3;UBERON:0005406,3.76e-18,2;UBERON:0006915,1.15e-12,3;UBERON:0007616,1.15e-12,3;UBERON:0002217,1.15e-12,3;UBERON:0002018,1.15e-12,3;UBERON:0004457,1.39e-11,12;UBERON:0000042,1.39e-11,12;UBERON:0005705,2.46e-09,1;UBERON:0008193,2.46e-09,1;UBERON:0010912,2.46e-09,1;UBERON:0002514,2.46e-09,1;UBERON:0003457,2.46e-09,1;UBERON:0008907,2.46e-09,1;UBERON:0008001,2.46e-09,1;UBERON:0007213,2.46e-09,1;UBERON:0009891,2.46e-09,1;UBERON:0007914,2.46e-09,1;UBERON:0009292,2.46e-09,1;UBERON:0003099,2.46e-09,1;UBERON:0007375,2.46e-09,1;UBERON:0003323,2.46e-09,1;UBERON:0010258,2.46e-09,1;UBERON:0007842,2.46e-09,1;UBERON:0009494,2.46e-09,1;UBERON:0010042,2.46e-09,1;UBERON:0010045,2.46e-09,1;UBERON:0010259,2.46e-09,1;UBERON:0010359,2.46e-09,1;UBERON:0009526,2.46e-09,1;UBERON:0002397,2.46e-09,1;UBERON:0003113,2.46e-09,1;UBERON:0003277,2.46e-09,1;UBERON:0001709,2.46e-09,1;UBERON:0004066,2.46e-09,1;UBERON:0002244,2.46e-09,1;UBERON:0005620,2.46e-09,1;UBERON:0004362,2.46e-09,1;UBERON:0010364,2.46e-09,1;UBERON:0010046,2.46e-09,1;UBERON:0005868,2.46e-09,1;UBERON:0007238,2.46e-09,1;UBERON:0004288,2.46e-09,1;UBERON:0004068,2.46e-09,1;UBERON:0010334,2.46e-09,1;UBERON:0003852,2.46e-09,1;UBERON:0010253,2.46e-09,1;UBERON:0000415,2.57e-09,4;UBERON:0007240,2.57e-09,4;UBERON:0005742,2.57e-09,4;UBERON:0005734,2.57e-09,4;UBERON:0004664,2.57e-09,4;UBERON:0004663,2.57e-09,4|phase1_expression=0.181678379270557,0.428201047781966,0.986680828671798,0,1.34088328328186,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,4.58938593198102,1.06400514659507,1.12135520028461,1.06748995729705,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0.355009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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48124348..48124365,- | |||
|id=chr20:48124348..48124365,- | |||
|ontology_enrichment_celltype=CL:0000057!6.10e-15!75;CL:0000055!4.19e-10!180;CL:0002334!8.54e-10!12;CL:1000306!2.25e-07!4;CL:0002547!2.25e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000135;4.13e-25;3!CL:0000388;4.13e-25;3!CL:0000214;1.18e-12;3!CL:0002334;3.01e-11;12!CL:0002581;6.87e-10;1!CL:0002616;6.87e-10;1!CL:1000306;2.08e-09;4!CL:0002547;2.08e-09;4!CL:0000499;2.31e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.21e-25,3;CL:0000388,2.21e-25,3;CL:0000214,1.15e-12,3;CL:0000057,2.44e-11,76;CL:0002334,2.66e-11,12;CL:0002581,5.79e-10,1;CL:0002616,6.31e-10,1;CL:1000306,2.57e-09,4;CL:0002547,2.57e-09,4;CL:0000499,2.07e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.55e-09;1!UBERON:0003099;1.55e-09;1!UBERON:0003852;1.55e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!2.52e-08!33;UBERON:0004571!2.52e-08!33;UBERON:0001637!1.85e-07!42;UBERON:0003509!1.85e-07!42;UBERON:0004572!1.85e-07!42;UBERON:0000415!2.25e-07!4;UBERON:0007240!2.25e-07!4;UBERON:0005742!2.25e-07!4;UBERON:0005734!2.25e-07!4;UBERON:0004664!2.25e-07!4;UBERON:0004663!2.25e-07!4;UBERON:0007100!6.87e-07!27;UBERON:0004458!8.19e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.13e-25;3!UBERON:0000043;4.13e-25;3!UBERON:0007845;4.13e-25;3!UBERON:0005406;4.84e-18;2!UBERON:0004457;2.81e-15;9!UBERON:0000042;2.81e-15;9!UBERON:0006915;1.18e-12;3!UBERON:0007616;1.18e-12;3!UBERON:0002217;1.18e-12;3!UBERON:0002018;1.18e-12;3!UBERON:0005705;1.55e-09;1!UBERON:0008193;1.55e-09;1!UBERON:0010912;1.55e-09;1!UBERON:0002514;1.55e-09;1!UBERON:0003457;1.55e-09;1!UBERON:0008907;1.55e-09;1!UBERON:0008001;1.55e-09;1!UBERON:0007213;1.55e-09;1!UBERON:0009891;1.55e-09;1!UBERON:0007914;1.55e-09;1!UBERON:0007375;1.55e-09;1!UBERON:0003323;1.55e-09;1!UBERON:0010258;1.55e-09;1!UBERON:0005253;1.55e-09;1!UBERON:0007842;1.55e-09;1!UBERON:0002397;1.55e-09;1!UBERON:0003113;1.55e-09;1!UBERON:0003277;1.55e-09;1!UBERON:0001709;1.55e-09;1!UBERON:0002244;1.55e-09;1!UBERON:0005620;1.55e-09;1!UBERON:0010364;1.55e-09;1!UBERON:0004288;1.55e-09;1!UBERON:0004797;2.08e-09;4!UBERON:0000415;2.08e-09;4!UBERON:0007240;2.08e-09;4!UBERON:0005742;2.08e-09;4!UBERON:0005734;2.08e-09;4!UBERON:0004664;2.08e-09;4!UBERON:0004663;2.08e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.21e-25,3;UBERON:0000043,2.21e-25,3;UBERON:0007845,2.21e-25,3;UBERON:0005406,3.76e-18,2;UBERON:0006915,1.15e-12,3;UBERON:0007616,1.15e-12,3;UBERON:0002217,1.15e-12,3;UBERON:0002018,1.15e-12,3;UBERON:0004457,1.39e-11,12;UBERON:0000042,1.39e-11,12;UBERON:0005705,2.46e-09,1;UBERON:0008193,2.46e-09,1;UBERON:0010912,2.46e-09,1;UBERON:0002514,2.46e-09,1;UBERON:0003457,2.46e-09,1;UBERON:0008907,2.46e-09,1;UBERON:0008001,2.46e-09,1;UBERON:0007213,2.46e-09,1;UBERON:0009891,2.46e-09,1;UBERON:0007914,2.46e-09,1;UBERON:0009292,2.46e-09,1;UBERON:0003099,2.46e-09,1;UBERON:0007375,2.46e-09,1;UBERON:0003323,2.46e-09,1;UBERON:0010258,2.46e-09,1;UBERON:0007842,2.46e-09,1;UBERON:0009494,2.46e-09,1;UBERON:0010042,2.46e-09,1;UBERON:0010045,2.46e-09,1;UBERON:0010259,2.46e-09,1;UBERON:0010359,2.46e-09,1;UBERON:0009526,2.46e-09,1;UBERON:0002397,2.46e-09,1;UBERON:0003113,2.46e-09,1;UBERON:0003277,2.46e-09,1;UBERON:0001709,2.46e-09,1;UBERON:0004066,2.46e-09,1;UBERON:0002244,2.46e-09,1;UBERON:0005620,2.46e-09,1;UBERON:0004362,2.46e-09,1;UBERON:0010364,2.46e-09,1;UBERON:0010046,2.46e-09,1;UBERON:0005868,2.46e-09,1;UBERON:0007238,2.46e-09,1;UBERON:0004288,2.46e-09,1;UBERON:0004068,2.46e-09,1;UBERON:0010334,2.46e-09,1;UBERON:0003852,2.46e-09,1;UBERON:0010253,2.46e-09,1;UBERON:0000415,2.57e-09,4;UBERON:0007240,2.57e-09,4;UBERON:0005742,2.57e-09,4;UBERON:0005734,2.57e-09,4;UBERON:0004664,2.57e-09,4;UBERON:0004663,2.57e-09,4 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.986680828671798,0,1.34088328328186,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,4.58938593198102,1.06400514659507,1.12135520028461,1.06748995729705,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,2.41151501647669,0,3.39908170018994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0,0,0,2.27407504055985,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,1.73675465473144,0.153461973288062,0.561320188866147,1.53766979106841,0,0.321707842287215,2.96836132889982,0,0.177561725313127,0,1.03850885836724,0.116210378459959,0,0,0,0.34444334449382,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.929691098594572,0.94443704049192,0,0,0,0,0.18532421910392,0.572499546967965,0.372158369359667,0,0,0,0,0,1.56989728039846,0,0,0,0.606547444719948,0,0.421258456238981,0,0.731140468893853,0,0,0.424216295861138,0,1.10273068709225,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0,0,0,0,0,4.64436797654861,5.92730807327823,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0,1.06726497369676,2.19790570540343,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604923695052956,0.15543720058278,0,0.63718706865481,0,0,0.829412415681711,0.265841714557995,0,0.300515217994437,0.380805212168795,0.813741466409323,0,0.537052785212442,0.464033759878494,0,0,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0.260994291965212,0,0.231522474323834,0,0,0,3.72782884283802,0,0.578742114812744,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |||
|short_description=p@chr20:48124348..48124365,- | |||
}} |
Revision as of 08:59, 12 September 2013
Short description: | p@chr20:48124348..48124365, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:48124348..48124365, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.21e-25 | 3 |
tendon cell | 2.21e-25 | 3 |
synovial cell | 1.15e-12 | 3 |
fibroblast | 2.44e-11 | 76 |
preadipocyte | 2.66e-11 | 12 |
perirenal preadipocyte | 5.79e-10 | 1 |
perirenal adipocyte cell | 6.31e-10 | 1 |
fibroblast of tunica adventitia of artery | 2.57e-09 | 4 |
fibroblast of the aortic adventitia | 2.57e-09 | 4 |
stromal cell | 2.07e-07 | 28 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.