FFCP PHASE1:Hg19::chr22:31968960..31968972,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9814|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29064|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000484806_5end|coexpression_cluster_id=C11|description=CAGE_peak_13_at_SFI1_5end|id=chr22:31968960..31968972,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.42e-30!57;UBERON:0005068!8.42e-30!57;UBERON:0006241!8.42e-30!57;UBERON:0007135!8.42e-30!57;UBERON:0002616!9.77e-29!59;UBERON:0004733!1.13e-28!12;UBERON:0002028!1.13e-28!12;UBERON:0007277!1.13e-28!12;UBERON:0000955!1.16e-27!69;UBERON:0006238!1.16e-27!69;UBERON:0004732!1.92e-26!13;UBERON:0007023!4.46e-24!115;UBERON:0001017!5.05e-23!82;UBERON:0003076!7.12e-23!15;UBERON:0003057!7.12e-23!15;UBERON:0005743!7.17e-22!86;UBERON:0000073!1.27e-19!94;UBERON:0001016!1.27e-19!94;UBERON:0003075!3.84e-19!86;UBERON:0007284!3.84e-19!86;UBERON:0002346!3.33e-18!90;UBERON:0002680!1.38e-17!9;UBERON:0001895!1.38e-17!9;UBERON:0010092!1.38e-17!9;UBERON:0001869!3.53e-17!32;UBERON:0001893!3.81e-16!34;UBERON:0001950!1.00e-15!20;UBERON:0002037!1.84e-15!6;UBERON:0006215!1.84e-15!6;UBERON:0000200!5.83e-15!6;UBERON:0000033!1.08e-14!123;UBERON:0002619!2.52e-14!22;UBERON:0000153!6.56e-14!129;UBERON:0007811!6.56e-14!129;UBERON:0001896!7.92e-14!3;UBERON:0005290!7.92e-14!3;UBERON:0010096!7.92e-14!3;UBERON:0002780!2.67e-13!41;UBERON:0001890!2.67e-13!41;UBERON:0006240!2.67e-13!41;UBERON:0003080!5.73e-13!42;UBERON:0002791!8.04e-13!33;UBERON:0000956!1.25e-12!25;UBERON:0000203!1.25e-12!25;UBERON:0002020!1.95e-12!34;UBERON:0003528!1.95e-12!34;UBERON:0002298!2.57e-11!8;UBERON:0002702!3.41e-11!1;UBERON:0000989!3.76e-11!1;UBERON:0008811!3.76e-11!1;UBERON:0006258!3.76e-11!1;UBERON:0005876!3.76e-11!1;UBERON:0004874!3.76e-11!1;UBERON:0001301!5.05e-11!1;UBERON:0002902!9.05e-11!1;UBERON:0009899!9.05e-11!1;UBERON:0007190!1.21e-10!1;UBERON:0001882!1.46e-10!1;UBERON:0005403!1.46e-10!1;UBERON:0002022!1.77e-10!1;UBERON:0004121!5.19e-10!169;UBERON:0000924!9.97e-10!173;UBERON:0006601!9.97e-10!173;UBERON:0003056!1.06e-08!61;UBERON:0000025!1.50e-08!194;UBERON:0003135!1.90e-08!11|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.13e-09;53!UBERON:0002616;8.13e-09;53!UBERON:0001016;9.28e-08;83!UBERON:0000955;1.62e-07;68!UBERON:0001017;8.55e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,4.86548743697388,9.75307142546707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9814 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29064 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000484806_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_13_at_SFI1_5end | |||
|id=chr22:31968960..31968972,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.42e-30!57;UBERON:0005068!8.42e-30!57;UBERON:0006241!8.42e-30!57;UBERON:0007135!8.42e-30!57;UBERON:0002616!9.77e-29!59;UBERON:0004733!1.13e-28!12;UBERON:0002028!1.13e-28!12;UBERON:0007277!1.13e-28!12;UBERON:0000955!1.16e-27!69;UBERON:0006238!1.16e-27!69;UBERON:0004732!1.92e-26!13;UBERON:0007023!4.46e-24!115;UBERON:0001017!5.05e-23!82;UBERON:0003076!7.12e-23!15;UBERON:0003057!7.12e-23!15;UBERON:0005743!7.17e-22!86;UBERON:0000073!1.27e-19!94;UBERON:0001016!1.27e-19!94;UBERON:0003075!3.84e-19!86;UBERON:0007284!3.84e-19!86;UBERON:0002346!3.33e-18!90;UBERON:0002680!1.38e-17!9;UBERON:0001895!1.38e-17!9;UBERON:0010092!1.38e-17!9;UBERON:0001869!3.53e-17!32;UBERON:0001893!3.81e-16!34;UBERON:0001950!1.00e-15!20;UBERON:0002037!1.84e-15!6;UBERON:0006215!1.84e-15!6;UBERON:0000200!5.83e-15!6;UBERON:0000033!1.08e-14!123;UBERON:0002619!2.52e-14!22;UBERON:0000153!6.56e-14!129;UBERON:0007811!6.56e-14!129;UBERON:0001896!7.92e-14!3;UBERON:0005290!7.92e-14!3;UBERON:0010096!7.92e-14!3;UBERON:0002780!2.67e-13!41;UBERON:0001890!2.67e-13!41;UBERON:0006240!2.67e-13!41;UBERON:0003080!5.73e-13!42;UBERON:0002791!8.04e-13!33;UBERON:0000956!1.25e-12!25;UBERON:0000203!1.25e-12!25;UBERON:0002020!1.95e-12!34;UBERON:0003528!1.95e-12!34;UBERON:0002298!2.57e-11!8;UBERON:0002702!3.41e-11!1;UBERON:0000989!3.76e-11!1;UBERON:0008811!3.76e-11!1;UBERON:0006258!3.76e-11!1;UBERON:0005876!3.76e-11!1;UBERON:0004874!3.76e-11!1;UBERON:0001301!5.05e-11!1;UBERON:0002902!9.05e-11!1;UBERON:0009899!9.05e-11!1;UBERON:0007190!1.21e-10!1;UBERON:0001882!1.46e-10!1;UBERON:0005403!1.46e-10!1;UBERON:0002022!1.77e-10!1;UBERON:0004121!5.19e-10!169;UBERON:0000924!9.97e-10!173;UBERON:0006601!9.97e-10!173;UBERON:0003056!1.06e-08!61;UBERON:0000025!1.50e-08!194;UBERON:0003135!1.90e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.13e-09;53!UBERON:0002616;8.13e-09;53!UBERON:0001016;9.28e-08;83!UBERON:0000955;1.62e-07;68!UBERON:0001017;8.55e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,4.86548743697388,9.75307142546707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@SFI1 | |||
}} |
Revision as of 11:34, 12 September 2013
Short description: | p13@SFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SFI1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000484806_5end |
EntrezGene: | SFI1 |
HGNC: | 29064 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
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