FFCP PHASE1:Hg19::chr3:69370095..69370115,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23150|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24886|TSSclassifier=N|UniProt=C9J6Q2|association_with_transcript=0bp_to_ENST00000470070,ENST00000473029,uc003dnx.1_5end|description=CAGE_peak_11_at_FRMD4B_5end|id=chr3:69370095..69370115,-|ontology_enrichment_celltype=CL:0000557!1.86e-27!71;CL:0000766!1.48e-25!76;CL:0000839!9.85e-25!70;CL:0002009!6.66e-23!65;CL:0002194!7.67e-21!63;CL:0000576!7.67e-21!63;CL:0000040!7.67e-21!63;CL:0000559!7.67e-21!63;CL:0000763!4.75e-17!112;CL:0000049!4.75e-17!112;CL:0000738!1.23e-15!140;CL:0002057!1.55e-15!42;CL:0002031!8.01e-15!124;CL:0000860!6.07e-14!45;CL:0002032!7.87e-11!165;CL:0000837!7.87e-11!165;CL:0002087!1.52e-10!119;CL:0000037!2.81e-10!172;CL:0000566!2.81e-10!172;CL:0000988!2.21e-09!182;CL:0002274!6.15e-08!5;CL:0000457!6.15e-08!5;CL:0002191!6.15e-08!5;CL:0000097!6.15e-08!5;CL:0000831!6.15e-08!5;CL:0002028!6.15e-08!5;CL:0000990!8.50e-07!8|ontology_enrichment_celltype_v019=CL:0000097;2.74e-16;5!CL:0000235;2.93e-15;6!CL:0002619;7.83e-12;3!CL:0000163;6.55e-09;9!CL:0000840;6.58e-09;5!CL:0001014;9.23e-08;2!CL:0001016;9.23e-08;2|ontology_enrichment_celltype_v019_2=CL:0000097,2.28e-16,5;CL:0002028,2.28e-16,5;CL:0000235,3.05e-15,6;CL:0000557,7.23e-15,67;CL:0000766,5.37e-12,72;CL:0000839,6.91e-12,66;CL:0002619,7.89e-12,3;CL:0000840,5.64e-09,5;CL:0001029,5.64e-09,5;CL:0000163,5.94e-09,9;CL:0002009,6.84e-09,61;CL:0000763,1.87e-08,108;CL:0000049,1.87e-08,108;CL:0001014,6.07e-08,2;CL:0001016,6.07e-08,2;CL:0002031,4.27e-07,120;CL:0002194,9.48e-07,59;CL:0000576,9.48e-07,59;CL:0000040,9.48e-07,59;CL:0000559,9.48e-07,59|ontology_enrichment_development_v019=UBERON:0004872;1.97e-12;7!UBERON:0005062;6.76e-08;4!UBERON:0007284;6.76e-08;4!UBERON:0006965;1.36e-07;2!UBERON:0006603;2.12e-07;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.98e-37!115;UBERON:0002390!9.50e-28!102;UBERON:0003061!9.50e-28!102;UBERON:0002193!4.79e-26!112;UBERON:0002371!4.04e-24!80;UBERON:0001474!2.15e-21!86;UBERON:0002405!4.31e-21!115;UBERON:0004765!6.02e-17!101;UBERON:0001434!6.02e-17!101;UBERON:0000062!1.07e-10!511;UBERON:0003081!5.76e-10!216;UBERON:0000922!7.98e-08!612;UBERON:0002204!1.22e-07!167;UBERON:0000480!1.27e-07!626;UBERON:0002050!2.13e-07!605;UBERON:0005423!2.13e-07!605;UBERON:0000467!2.53e-07!625;UBERON:0000923!4.84e-07!604;UBERON:0005291!4.84e-07!604;UBERON:0006598!4.84e-07!604;UBERON:0002532!4.84e-07!604;UBERON:0000468!5.80e-07!659|ontology_enrichment_uberon_v019=UBERON:0003978;2.16e-10;3!UBERON:0000946;2.16e-10;3!UBERON:0002081;6.04e-08;2!UBERON:0002133;1.36e-07;2!UBERON:0004177;7.37e-07;5!UBERON:0005057;7.37e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.79e-16,93;UBERON:0007023,5.17e-14,114;UBERON:0002371,5.19e-14,76;UBERON:0002390,1.51e-13,98;UBERON:0003061,1.51e-13,98;UBERON:0002193,6.74e-13,108;UBERON:0001474,1.28e-12,82;UBERON:0004765,4.70e-11,90;UBERON:0003978,1.38e-10,3;UBERON:0009751,1.38e-10,3;UBERON:0000946,1.38e-10,3;UBERON:0002523,1.38e-10,3;UBERON:0005983,1.38e-10,3;UBERON:0002165,1.38e-10,3;UBERON:0002062,1.38e-10,3;UBERON:0007280,1.38e-10,3;UBERON:0003081,8.84e-10,203;UBERON:0001434,1.85e-09,100;UBERON:0002081,8.24e-08,2;UBERON:0010227,8.24e-08,2;UBERON:0002133,1.36e-07,2;UBERON:0000926,2.04e-07,315;UBERON:0004120,2.04e-07,315;UBERON:0006603,2.04e-07,315;UBERON:0005409,4.95e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.328402357799783,0.550975469195755,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,7.16529517567758,7.77344798445551,10.0454471377333,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.619412741790207,0,0.256160706529101,0,0.689491361473237,0.645484683583826,1.35426486594342,0.376484679085209,0.545812300115692,0,0.918251677112708,0.320929027076094,0.639337125799041,0,0.797854630486527,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,1.3031330682307,0.605399502633369,0.368277635987565,0,0.211255286311942,0.212604299965044,0.209658645508376,0.336985893439485,1.20141514273205,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0.97364218096405,1.0447784237956,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5268033591564,0,4.45893486866185,0,0,0,0,0,0,2.46331618947972,1.93706554829097,2.07328115540772,1.72943944100354,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,8.03611346291402,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24886 | |||
|TSSclassifier=N | |||
|UniProt=C9J6Q2 | |||
|association_with_transcript=0bp_to_ENST00000470070,ENST00000473029,uc003dnx.1_5end | |||
|description=CAGE_peak_11_at_FRMD4B_5end | |||
|id=chr3:69370095..69370115,- | |||
|ontology_enrichment_celltype=CL:0000557!1.86e-27!71;CL:0000766!1.48e-25!76;CL:0000839!9.85e-25!70;CL:0002009!6.66e-23!65;CL:0002194!7.67e-21!63;CL:0000576!7.67e-21!63;CL:0000040!7.67e-21!63;CL:0000559!7.67e-21!63;CL:0000763!4.75e-17!112;CL:0000049!4.75e-17!112;CL:0000738!1.23e-15!140;CL:0002057!1.55e-15!42;CL:0002031!8.01e-15!124;CL:0000860!6.07e-14!45;CL:0002032!7.87e-11!165;CL:0000837!7.87e-11!165;CL:0002087!1.52e-10!119;CL:0000037!2.81e-10!172;CL:0000566!2.81e-10!172;CL:0000988!2.21e-09!182;CL:0002274!6.15e-08!5;CL:0000457!6.15e-08!5;CL:0002191!6.15e-08!5;CL:0000097!6.15e-08!5;CL:0000831!6.15e-08!5;CL:0002028!6.15e-08!5;CL:0000990!8.50e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.74e-16;5!CL:0000235;2.93e-15;6!CL:0002619;7.83e-12;3!CL:0000163;6.55e-09;9!CL:0000840;6.58e-09;5!CL:0001014;9.23e-08;2!CL:0001016;9.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.28e-16,5;CL:0002028,2.28e-16,5;CL:0000235,3.05e-15,6;CL:0000557,7.23e-15,67;CL:0000766,5.37e-12,72;CL:0000839,6.91e-12,66;CL:0002619,7.89e-12,3;CL:0000840,5.64e-09,5;CL:0001029,5.64e-09,5;CL:0000163,5.94e-09,9;CL:0002009,6.84e-09,61;CL:0000763,1.87e-08,108;CL:0000049,1.87e-08,108;CL:0001014,6.07e-08,2;CL:0001016,6.07e-08,2;CL:0002031,4.27e-07,120;CL:0002194,9.48e-07,59;CL:0000576,9.48e-07,59;CL:0000040,9.48e-07,59;CL:0000559,9.48e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.97e-12;7!UBERON:0005062;6.76e-08;4!UBERON:0007284;6.76e-08;4!UBERON:0006965;1.36e-07;2!UBERON:0006603;2.12e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.98e-37!115;UBERON:0002390!9.50e-28!102;UBERON:0003061!9.50e-28!102;UBERON:0002193!4.79e-26!112;UBERON:0002371!4.04e-24!80;UBERON:0001474!2.15e-21!86;UBERON:0002405!4.31e-21!115;UBERON:0004765!6.02e-17!101;UBERON:0001434!6.02e-17!101;UBERON:0000062!1.07e-10!511;UBERON:0003081!5.76e-10!216;UBERON:0000922!7.98e-08!612;UBERON:0002204!1.22e-07!167;UBERON:0000480!1.27e-07!626;UBERON:0002050!2.13e-07!605;UBERON:0005423!2.13e-07!605;UBERON:0000467!2.53e-07!625;UBERON:0000923!4.84e-07!604;UBERON:0005291!4.84e-07!604;UBERON:0006598!4.84e-07!604;UBERON:0002532!4.84e-07!604;UBERON:0000468!5.80e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.16e-10;3!UBERON:0000946;2.16e-10;3!UBERON:0002081;6.04e-08;2!UBERON:0002133;1.36e-07;2!UBERON:0004177;7.37e-07;5!UBERON:0005057;7.37e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.79e-16,93;UBERON:0007023,5.17e-14,114;UBERON:0002371,5.19e-14,76;UBERON:0002390,1.51e-13,98;UBERON:0003061,1.51e-13,98;UBERON:0002193,6.74e-13,108;UBERON:0001474,1.28e-12,82;UBERON:0004765,4.70e-11,90;UBERON:0003978,1.38e-10,3;UBERON:0009751,1.38e-10,3;UBERON:0000946,1.38e-10,3;UBERON:0002523,1.38e-10,3;UBERON:0005983,1.38e-10,3;UBERON:0002165,1.38e-10,3;UBERON:0002062,1.38e-10,3;UBERON:0007280,1.38e-10,3;UBERON:0003081,8.84e-10,203;UBERON:0001434,1.85e-09,100;UBERON:0002081,8.24e-08,2;UBERON:0010227,8.24e-08,2;UBERON:0002133,1.36e-07,2;UBERON:0000926,2.04e-07,315;UBERON:0004120,2.04e-07,315;UBERON:0006603,2.04e-07,315;UBERON:0005409,4.95e-07,25 | |||
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|short_description=p11@FRMD4B | |||
}} |
Revision as of 01:15, 13 September 2013
Short description: | p11@FRMD4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_FRMD4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000470070, ENST00000473029, uc003dnx.1_5end |
EntrezGene: | FRMD4B |
HGNC: | 24886 |
UniProt: | C9J6Q2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.28e-16 | 5 |
basophil mast progenitor cell | 2.28e-16 | 5 |
macrophage | 3.05e-15 | 6 |
granulocyte monocyte progenitor cell | 7.23e-15 | 67 |
myeloid leukocyte | 5.37e-12 | 72 |
myeloid lineage restricted progenitor cell | 6.91e-12 | 66 |
adult endothelial progenitor cell | 7.89e-12 | 3 |
immature conventional dendritic cell | 5.64e-09 | 5 |
common dendritic progenitor | 5.64e-09 | 5 |
endocrine cell | 5.94e-09 | 9 |
macrophage dendritic cell progenitor | 6.84e-09 | 61 |
myeloid cell | 1.87e-08 | 108 |
common myeloid progenitor | 1.87e-08 | 108 |
CD1a-positive Langerhans cell | 6.07e-08 | 2 |
immature CD1a-positive Langerhans cell | 6.07e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 4.27e-07 | 120 |
monopoietic cell | 9.48e-07 | 59 |
monocyte | 9.48e-07 | 59 |
monoblast | 9.48e-07 | 59 |
promonocyte | 9.48e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
immune system | 5.79e-16 | 93 |
adult organism | 5.17e-14 | 114 |
bone marrow | 5.19e-14 | 76 |
hematopoietic system | 1.51e-13 | 98 |
blood island | 1.51e-13 | 98 |
hemolymphoid system | 6.74e-13 | 108 |
bone element | 1.28e-12 | 82 |
skeletal element | 4.70e-11 | 90 |
valve | 1.38e-10 | 3 |
cardiac mesenchyme | 1.38e-10 | 3 |
cardial valve | 1.38e-10 | 3 |
tunica intima | 1.38e-10 | 3 |
heart layer | 1.38e-10 | 3 |
endocardium | 1.38e-10 | 3 |
endocardial cushion | 1.38e-10 | 3 |
presumptive endocardium | 1.38e-10 | 3 |
lateral plate mesoderm | 8.84e-10 | 203 |
skeletal system | 1.85e-09 | 100 |
cardiac atrium | 8.24e-08 | 2 |
future cardiac atrium | 8.24e-08 | 2 |
atrioventricular valve | 1.36e-07 | 2 |
mesoderm | 2.04e-07 | 315 |
mesoderm-derived structure | 2.04e-07 | 315 |
presumptive mesoderm | 2.04e-07 | 315 |
gastrointestinal system | 4.95e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.