FFCP PHASE1:Hg19::chr3:111261025..111261070,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10225|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16892|TSSclassifier=S|UniProt=F8WDV3,E9PEJ1|association_with_transcript=0bp_to_ENST00000488054,ENST00000494798_5end|coexpression_cluster_id=C18|description=CAGE_peak_1_at_CD96_5end|id=chr3:111261025..111261070,+|ontology_enrichment_celltype=CL:0000037!4.44e-43!172;CL:0000566!4.44e-43!172;CL:0000988!7.67e-42!182;CL:0000738!1.54e-40!140;CL:0002032!1.22e-38!165;CL:0000837!1.22e-38!165;CL:0002087!2.29e-30!119;CL:0002031!8.94e-30!124;CL:0000838!1.76e-25!52;CL:0000542!1.20e-24!53;CL:0000051!1.20e-24!53;CL:0000084!8.45e-22!25;CL:0000827!8.45e-22!25;CL:0000791!4.00e-18!18;CL:0000789!4.00e-18!18;CL:0002420!4.00e-18!18;CL:0002419!4.00e-18!18;CL:0000790!4.00e-18!18;CL:0000763!1.30e-15!112;CL:0000049!1.30e-15!112;CL:0000766!6.39e-12!76;CL:0000625!6.47e-12!11;CL:0002057!8.49e-10!42;CL:0000557!1.34e-08!71;CL:0000860!1.60e-08!45;CL:0000839!3.58e-08!70;CL:0002009!2.66e-07!65;CL:0002194!3.05e-07!63;CL:0000576!3.05e-07!63;CL:0000040!3.05e-07!63;CL:0000559!3.05e-07!63;CL:0000094!5.91e-07!8;CL:0000624!6.05e-07!6|ontology_enrichment_celltype_v019=CL:0000084;4.93e-27;25!CL:0000791;3.19e-25;18!CL:0000789;3.19e-25;18!CL:0002419;3.19e-25;18!CL:0000625;2.42e-16;11!CL:0000542;2.36e-13;53!CL:0002087;4.93e-12;104!CL:0000738;2.01e-09;136!CL:0000624;2.93e-09;6!CL:0000988;1.64e-08;177!CL:0000860;4.56e-08;33!CL:0002057;4.56e-08;33!CL:0000094;1.46e-07;8!CL:0000081;9.15e-07;11!CL:0000576;9.84e-07;48|ontology_enrichment_celltype_v019_2=CL:0000988,3.12e-41,177;CL:0000037,6.39e-41,168;CL:0000738,5.50e-40,136;CL:0002032,2.34e-37,161;CL:0000837,2.34e-37,161;CL:0002087,2.23e-30,115;CL:0002031,1.31e-27,120;CL:0000084,4.37e-27,25;CL:0000827,4.37e-27,25;CL:0000791,3.18e-25,18;CL:0000789,3.18e-25,18;CL:0002420,3.18e-25,18;CL:0002419,3.18e-25,18;CL:0000790,3.18e-25,18;CL:0000838,2.40e-23,52;CL:0000542,1.12e-22,53;CL:0000051,1.12e-22,53;CL:0000625,2.42e-16,11;CL:0000763,9.74e-16,108;CL:0000049,9.74e-16,108;CL:0000766,5.01e-12,72;CL:0000624,2.96e-09,6;CL:0000860,8.68e-09,42;CL:0002057,8.68e-09,42;CL:0000557,1.30e-08,67;CL:0002009,6.60e-08,61;CL:0000134,8.01e-08,354;CL:0002194,1.03e-07,59;CL:0000576,1.03e-07,59;CL:0000040,1.03e-07,59;CL:0000559,1.03e-07,59;CL:0000094,1.40e-07,8;CL:0000839,1.54e-07,66;CL:0002320,2.94e-07,361;CL:0000473,5.73e-07,48;CL:0000234,5.73e-07,48;CL:0000081,8.82e-07,11|ontology_enrichment_development_v019=CL:0000790;3.19e-25;18!CL:0000051;2.36e-13;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.67e-18!102;UBERON:0003061!1.67e-18!102;UBERON:0002193!1.29e-16!112;UBERON:0007023!4.17e-14!115;UBERON:0000178!1.88e-13!15;UBERON:0000179!1.88e-13!15;UBERON:0000463!1.88e-13!15;UBERON:0002405!2.07e-07!115;UBERON:0002371!2.62e-07!80;UBERON:0001474!5.78e-07!86|ontology_enrichment_uberon_v019=UBERON:0000178;1.53e-18;15!UBERON:0000179;1.53e-18;15!UBERON:0000463;1.53e-18;15!UBERON:0002390;2.19e-11;32!UBERON:0002193;9.32e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.92e-20,98;UBERON:0003061,1.92e-20,98;UBERON:0002193,3.90e-19,108;UBERON:0000178,1.54e-18,15;UBERON:0000179,1.54e-18,15;UBERON:0000463,1.54e-18,15;UBERON:0002405,3.21e-09,93;UBERON:0004177,4.26e-07,7;UBERON:0005057,4.26e-07,7;UBERON:0002384,7.65e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0.916960868975415,0.492603536699674,0.708397031823113,14.1611139665605,63.7156800841373,10.3726802621771,0,0,0,0.0774672005803016,0,0.880801318004542,9.41792194504192,11.4310335057981,8.89744569934992,2.46307021663917,10.0407036465884,4.37878464978117,2.32637182047304,0.755751887377619,0.727752183563449,1.85943229524548,0.822335776043652,1.54853185447552,0.575384784644301,2.0492856522328,2.12834006899727,2.75796544589295,2.5819387343353,0,0.941211697713023,3.0019676506363,0.674170453335254,4.28517449319264,4.17207735198922,2.55734850319616,1.31940520074686,1.19678194572979,0,2.90209238628584,1.70215567407342,1.24564449799115,2.00998932205395,1.5644487552606,0.434377689410233,3.02699751316684,2.20966581592539,1.26584954976354,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0.889509253863555,0.853460445133014,0,1.14950487990897,0,1.90810750907073,7.96898156753228,1.76171156811282,9.55683070313072,0,21.8598339562799,1.58030450865046,72.3891954018906,47.1612915298998,42.1483072948994,87.271350593934,63.2289197269165,65.3357971913932,29.2240092611867,203.881136099868,49.1991865482978,48.7374568083967,95.0521561815205,51.3646192099957,71.7927598530528,163.780152985261,162.770160475865,230.393453159367,81.8541828654573,82.1350342235419,54.3584723785879,186.393868737496,94.2722414260726,76.2852928971438,124.485688473595,77.4113956807555,70.3170130164932,78.8875196892151,76.4921604915086,94.0701591984975,79.9556649935013,87.1340287521982,78.8282877044205,105.23871996331,66.3251685543098,58.0745859570024,0,0,0.5114502473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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10225 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16892 | |||
|TSSclassifier=S | |||
|UniProt=F8WDV3,E9PEJ1 | |||
|association_with_transcript=0bp_to_ENST00000488054,ENST00000494798_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_CD96_5end | |||
|id=chr3:111261025..111261070,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.44e-43!172;CL:0000566!4.44e-43!172;CL:0000988!7.67e-42!182;CL:0000738!1.54e-40!140;CL:0002032!1.22e-38!165;CL:0000837!1.22e-38!165;CL:0002087!2.29e-30!119;CL:0002031!8.94e-30!124;CL:0000838!1.76e-25!52;CL:0000542!1.20e-24!53;CL:0000051!1.20e-24!53;CL:0000084!8.45e-22!25;CL:0000827!8.45e-22!25;CL:0000791!4.00e-18!18;CL:0000789!4.00e-18!18;CL:0002420!4.00e-18!18;CL:0002419!4.00e-18!18;CL:0000790!4.00e-18!18;CL:0000763!1.30e-15!112;CL:0000049!1.30e-15!112;CL:0000766!6.39e-12!76;CL:0000625!6.47e-12!11;CL:0002057!8.49e-10!42;CL:0000557!1.34e-08!71;CL:0000860!1.60e-08!45;CL:0000839!3.58e-08!70;CL:0002009!2.66e-07!65;CL:0002194!3.05e-07!63;CL:0000576!3.05e-07!63;CL:0000040!3.05e-07!63;CL:0000559!3.05e-07!63;CL:0000094!5.91e-07!8;CL:0000624!6.05e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.93e-27;25!CL:0000791;3.19e-25;18!CL:0000789;3.19e-25;18!CL:0002419;3.19e-25;18!CL:0000625;2.42e-16;11!CL:0000542;2.36e-13;53!CL:0002087;4.93e-12;104!CL:0000738;2.01e-09;136!CL:0000624;2.93e-09;6!CL:0000988;1.64e-08;177!CL:0000860;4.56e-08;33!CL:0002057;4.56e-08;33!CL:0000094;1.46e-07;8!CL:0000081;9.15e-07;11!CL:0000576;9.84e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.12e-41,177;CL:0000037,6.39e-41,168;CL:0000738,5.50e-40,136;CL:0002032,2.34e-37,161;CL:0000837,2.34e-37,161;CL:0002087,2.23e-30,115;CL:0002031,1.31e-27,120;CL:0000084,4.37e-27,25;CL:0000827,4.37e-27,25;CL:0000791,3.18e-25,18;CL:0000789,3.18e-25,18;CL:0002420,3.18e-25,18;CL:0002419,3.18e-25,18;CL:0000790,3.18e-25,18;CL:0000838,2.40e-23,52;CL:0000542,1.12e-22,53;CL:0000051,1.12e-22,53;CL:0000625,2.42e-16,11;CL:0000763,9.74e-16,108;CL:0000049,9.74e-16,108;CL:0000766,5.01e-12,72;CL:0000624,2.96e-09,6;CL:0000860,8.68e-09,42;CL:0002057,8.68e-09,42;CL:0000557,1.30e-08,67;CL:0002009,6.60e-08,61;CL:0000134,8.01e-08,354;CL:0002194,1.03e-07,59;CL:0000576,1.03e-07,59;CL:0000040,1.03e-07,59;CL:0000559,1.03e-07,59;CL:0000094,1.40e-07,8;CL:0000839,1.54e-07,66;CL:0002320,2.94e-07,361;CL:0000473,5.73e-07,48;CL:0000234,5.73e-07,48;CL:0000081,8.82e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.19e-25;18!CL:0000051;2.36e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-18!102;UBERON:0003061!1.67e-18!102;UBERON:0002193!1.29e-16!112;UBERON:0007023!4.17e-14!115;UBERON:0000178!1.88e-13!15;UBERON:0000179!1.88e-13!15;UBERON:0000463!1.88e-13!15;UBERON:0002405!2.07e-07!115;UBERON:0002371!2.62e-07!80;UBERON:0001474!5.78e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.53e-18;15!UBERON:0000179;1.53e-18;15!UBERON:0000463;1.53e-18;15!UBERON:0002390;2.19e-11;32!UBERON:0002193;9.32e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.92e-20,98;UBERON:0003061,1.92e-20,98;UBERON:0002193,3.90e-19,108;UBERON:0000178,1.54e-18,15;UBERON:0000179,1.54e-18,15;UBERON:0000463,1.54e-18,15;UBERON:0002405,3.21e-09,93;UBERON:0004177,4.26e-07,7;UBERON:0005057,4.26e-07,7;UBERON:0002384,7.65e-07,371 | |||
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| |||
|short_description=p1@CD96 | |||
}} |
Revision as of 20:42, 12 September 2013
Short description: | p1@CD96 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CD96_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000488054, ENST00000494798_5end |
EntrezGene: | CD96 |
HGNC: | 16892 |
UniProt: | F8WDV3E9PEJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.92e-20 | 98 |
blood island | 1.92e-20 | 98 |
hemolymphoid system | 3.90e-19 | 108 |
blood | 1.54e-18 | 15 |
haemolymphatic fluid | 1.54e-18 | 15 |
organism substance | 1.54e-18 | 15 |
immune system | 3.21e-09 | 93 |
hemopoietic organ | 4.26e-07 | 7 |
immune organ | 4.26e-07 | 7 |
connective tissue | 7.65e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.