FFCP PHASE1:Hg19::chr7:107872849..107872866,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:107872849..107872866,-|id=chr7:107872849..107872866,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002561;1.44e-09;2!CL:0002615;8.62e-07;3!CL:0000307;8.62e-07;3|ontology_enrichment_celltype_v019_2=CL:0002561,1.12e-09,2|ontology_enrichment_development_v019=CL:0000377;8.62e-07;3!UBERON:0006215;8.62e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.42e-46!57;UBERON:0005068!2.42e-46!57;UBERON:0006241!2.42e-46!57;UBERON:0007135!2.42e-46!57;UBERON:0001017!1.51e-39!82;UBERON:0003075!9.71e-39!86;UBERON:0007284!9.71e-39!86;UBERON:0005743!1.42e-38!86;UBERON:0002616!2.73e-37!59;UBERON:0002780!3.59e-37!41;UBERON:0001890!3.59e-37!41;UBERON:0006240!3.59e-37!41;UBERON:0002346!2.56e-36!90;UBERON:0003080!4.75e-36!42;UBERON:0000073!4.71e-35!94;UBERON:0001016!4.71e-35!94;UBERON:0000955!5.14e-35!69;UBERON:0006238!5.14e-35!69;UBERON:0001893!1.06e-32!34;UBERON:0002020!1.49e-32!34;UBERON:0003528!1.49e-32!34;UBERON:0003056!9.39e-32!61;UBERON:0002791!1.41e-31!33;UBERON:0001869!2.48e-30!32;UBERON:0000956!2.30e-26!25;UBERON:0000203!2.30e-26!25;UBERON:0007023!8.77e-25!115;UBERON:0002619!1.28e-24!22;UBERON:0001950!1.91e-24!20;UBERON:0000033!1.91e-24!123;UBERON:0000153!1.34e-22!129;UBERON:0007811!1.34e-22!129;UBERON:0004121!9.16e-21!169;UBERON:0000924!6.78e-20!173;UBERON:0006601!6.78e-20!173;UBERON:0000025!3.26e-15!194;UBERON:0004111!6.36e-13!241;UBERON:0000477!4.31e-12!286;UBERON:0003076!3.49e-11!15;UBERON:0003057!3.49e-11!15;UBERON:0000475!1.91e-10!365;UBERON:0000483!2.62e-10!309;UBERON:0000119!4.89e-10!312;UBERON:0002021!1.15e-09!5;UBERON:0000064!2.78e-09!219;UBERON:0001872!3.84e-09!5;UBERON:0001871!3.47e-08!7;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9;UBERON:0000200!2.62e-07!6;UBERON:0004733!2.82e-07!12;UBERON:0002028!2.82e-07!12;UBERON:0007277!2.82e-07!12;UBERON:0000481!8.75e-07!347|ontology_enrichment_uberon_v019=UBERON:0001950;7.95e-20;20!UBERON:0002619;4.09e-18;22!UBERON:0000956;4.87e-16;25!UBERON:0000203;4.87e-16;25!UBERON:0002021;2.75e-14;5!UBERON:0002791;1.70e-12;32!UBERON:0001869;1.70e-12;32!UBERON:0001893;1.71e-12;34!UBERON:0001871;1.61e-10;6!UBERON:0002771;7.97e-10;2!UBERON:0005933;1.44e-09;2!UBERON:0005942;1.44e-09;2!UBERON:0005932;1.44e-09;2!UBERON:0003528;3.74e-09;34!UBERON:0002020;3.74e-09;34!UBERON:0000955;1.27e-08;68!UBERON:0001017;2.87e-08;75!UBERON:0002780;4.39e-08;41!UBERON:0001890;4.39e-08;41!UBERON:0002114;8.62e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.35e-20,20;UBERON:0002619,3.81e-18,22;UBERON:0000956,4.57e-16,25;UBERON:0000203,4.57e-16,25;UBERON:0002021,2.95e-14,5;UBERON:0002791,1.12e-12,32;UBERON:0001869,1.12e-12,32;UBERON:0003528,5.90e-12,34;UBERON:0002020,5.90e-12,34;UBERON:0001893,5.90e-12,34;UBERON:0000955,2.93e-11,68;UBERON:0006238,2.93e-11,68;UBERON:0000073,6.71e-11,53;UBERON:0002616,6.71e-11,53;UBERON:0001871,1.53e-10,6;UBERON:0001049,2.58e-10,56;UBERON:0005068,2.58e-10,56;UBERON:0006241,2.58e-10,56;UBERON:0007135,2.58e-10,56;UBERON:0002780,5.72e-10,41;UBERON:0001890,5.72e-10,41;UBERON:0003080,5.72e-10,41;UBERON:0006240,5.72e-10,41;UBERON:0002771,7.98e-10,2;UBERON:0005933,1.12e-09,2;UBERON:0005942,1.12e-09,2;UBERON:0005932,1.12e-09,2;UBERON:0001017,1.98e-09,81;UBERON:0001016,1.83e-08,89;UBERON:0010371,2.37e-07,104;UBERON:0003075,5.25e-07,82;UBERON:0007284,5.25e-07,82;UBERON:0003056,9.54e-07,61;UBERON:0002114,9.64e-07,2|phase1_expression=0,0.642301571672949,0.281908808191942,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:107872849..107872866,- | |||
|id=chr7:107872849..107872866,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002561;1.44e-09;2!CL:0002615;8.62e-07;3!CL:0000307;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.12e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000377;8.62e-07;3!UBERON:0006215;8.62e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.42e-46!57;UBERON:0005068!2.42e-46!57;UBERON:0006241!2.42e-46!57;UBERON:0007135!2.42e-46!57;UBERON:0001017!1.51e-39!82;UBERON:0003075!9.71e-39!86;UBERON:0007284!9.71e-39!86;UBERON:0005743!1.42e-38!86;UBERON:0002616!2.73e-37!59;UBERON:0002780!3.59e-37!41;UBERON:0001890!3.59e-37!41;UBERON:0006240!3.59e-37!41;UBERON:0002346!2.56e-36!90;UBERON:0003080!4.75e-36!42;UBERON:0000073!4.71e-35!94;UBERON:0001016!4.71e-35!94;UBERON:0000955!5.14e-35!69;UBERON:0006238!5.14e-35!69;UBERON:0001893!1.06e-32!34;UBERON:0002020!1.49e-32!34;UBERON:0003528!1.49e-32!34;UBERON:0003056!9.39e-32!61;UBERON:0002791!1.41e-31!33;UBERON:0001869!2.48e-30!32;UBERON:0000956!2.30e-26!25;UBERON:0000203!2.30e-26!25;UBERON:0007023!8.77e-25!115;UBERON:0002619!1.28e-24!22;UBERON:0001950!1.91e-24!20;UBERON:0000033!1.91e-24!123;UBERON:0000153!1.34e-22!129;UBERON:0007811!1.34e-22!129;UBERON:0004121!9.16e-21!169;UBERON:0000924!6.78e-20!173;UBERON:0006601!6.78e-20!173;UBERON:0000025!3.26e-15!194;UBERON:0004111!6.36e-13!241;UBERON:0000477!4.31e-12!286;UBERON:0003076!3.49e-11!15;UBERON:0003057!3.49e-11!15;UBERON:0000475!1.91e-10!365;UBERON:0000483!2.62e-10!309;UBERON:0000119!4.89e-10!312;UBERON:0002021!1.15e-09!5;UBERON:0000064!2.78e-09!219;UBERON:0001872!3.84e-09!5;UBERON:0001871!3.47e-08!7;UBERON:0002308!1.03e-07!9;UBERON:0000125!1.03e-07!9;UBERON:0000200!2.62e-07!6;UBERON:0004733!2.82e-07!12;UBERON:0002028!2.82e-07!12;UBERON:0007277!2.82e-07!12;UBERON:0000481!8.75e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.95e-20;20!UBERON:0002619;4.09e-18;22!UBERON:0000956;4.87e-16;25!UBERON:0000203;4.87e-16;25!UBERON:0002021;2.75e-14;5!UBERON:0002791;1.70e-12;32!UBERON:0001869;1.70e-12;32!UBERON:0001893;1.71e-12;34!UBERON:0001871;1.61e-10;6!UBERON:0002771;7.97e-10;2!UBERON:0005933;1.44e-09;2!UBERON:0005942;1.44e-09;2!UBERON:0005932;1.44e-09;2!UBERON:0003528;3.74e-09;34!UBERON:0002020;3.74e-09;34!UBERON:0000955;1.27e-08;68!UBERON:0001017;2.87e-08;75!UBERON:0002780;4.39e-08;41!UBERON:0001890;4.39e-08;41!UBERON:0002114;8.62e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.35e-20,20;UBERON:0002619,3.81e-18,22;UBERON:0000956,4.57e-16,25;UBERON:0000203,4.57e-16,25;UBERON:0002021,2.95e-14,5;UBERON:0002791,1.12e-12,32;UBERON:0001869,1.12e-12,32;UBERON:0003528,5.90e-12,34;UBERON:0002020,5.90e-12,34;UBERON:0001893,5.90e-12,34;UBERON:0000955,2.93e-11,68;UBERON:0006238,2.93e-11,68;UBERON:0000073,6.71e-11,53;UBERON:0002616,6.71e-11,53;UBERON:0001871,1.53e-10,6;UBERON:0001049,2.58e-10,56;UBERON:0005068,2.58e-10,56;UBERON:0006241,2.58e-10,56;UBERON:0007135,2.58e-10,56;UBERON:0002780,5.72e-10,41;UBERON:0001890,5.72e-10,41;UBERON:0003080,5.72e-10,41;UBERON:0006240,5.72e-10,41;UBERON:0002771,7.98e-10,2;UBERON:0005933,1.12e-09,2;UBERON:0005942,1.12e-09,2;UBERON:0005932,1.12e-09,2;UBERON:0001017,1.98e-09,81;UBERON:0001016,1.83e-08,89;UBERON:0010371,2.37e-07,104;UBERON:0003075,5.25e-07,82;UBERON:0007284,5.25e-07,82;UBERON:0003056,9.54e-07,61;UBERON:0002114,9.64e-07,2 | |||
|phase1_expression=0,0.642301571672949,0.281908808191942,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.482385754501632,1.52581736317083,0.774054819518572,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,1.53036380815245,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0.544813624446302,0,0,0,0.2249738915515,0,0.242998226632099,0,0.0788057072991982,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6369980662746,0.625954653532499,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0.276516872303462,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0.319267718114302,2.66651273512982,0.504143392443436,0.345786262321089,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.135075169236789,0.781078098613847,0.620060389503552,0.126831620387814,1.64092442705466,0,0,0,0,0,0.336283722218824,0.606965604236632,0.227662191351298,0.177404740325278,0.460935950223117,0,0.135939465953663,0.263091094251396,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0.23248285073625,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0,0.701818390386317,0,0,0.22589216407792,0.109940516745429,0,0,0,0.470317296361523,0,0,0.392616934229891,0.594092800654172,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.407948941145488,1.30905207102113,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:107872849..107872866,- | |||
}} |
Revision as of 22:41, 13 September 2013
Short description: | p@chr7:107872849..107872866, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:107872849..107872866, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.12e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
neocortex | 7.35e-20 | 20 |
regional part of cerebral cortex | 3.81e-18 | 22 |
cerebral cortex | 4.57e-16 | 25 |
pallium | 4.57e-16 | 25 |
occipital lobe | 2.95e-14 | 5 |
regional part of telencephalon | 1.12e-12 | 32 |
cerebral hemisphere | 1.12e-12 | 32 |
brain grey matter | 5.90e-12 | 34 |
gray matter | 5.90e-12 | 34 |
telencephalon | 5.90e-12 | 34 |
brain | 2.93e-11 | 68 |
future brain | 2.93e-11 | 68 |
regional part of nervous system | 6.71e-11 | 53 |
regional part of brain | 6.71e-11 | 53 |
temporal lobe | 1.53e-10 | 6 |
neural tube | 2.58e-10 | 56 |
neural rod | 2.58e-10 | 56 |
future spinal cord | 2.58e-10 | 56 |
neural keel | 2.58e-10 | 56 |
regional part of forebrain | 5.72e-10 | 41 |
forebrain | 5.72e-10 | 41 |
anterior neural tube | 5.72e-10 | 41 |
future forebrain | 5.72e-10 | 41 |
middle temporal gyrus | 7.98e-10 | 2 |
hair root sheath | 1.12e-09 | 2 |
hair outer root sheath | 1.12e-09 | 2 |
bulb of hair follicle | 1.12e-09 | 2 |
central nervous system | 1.98e-09 | 81 |
nervous system | 1.83e-08 | 89 |
ecto-epithelium | 2.37e-07 | 104 |
neural plate | 5.25e-07 | 82 |
presumptive neural plate | 5.25e-07 | 82 |
pre-chordal neural plate | 9.54e-07 | 61 |
duodenum | 9.64e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.