FFCP PHASE1:Hg19::chr7:150945865..150945896,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6604 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11108 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-94bp_to_ENST00000472988_5end | |||
|description=CAGE_peak_4_at_SMARCD3_5end | |||
|id=chr7:150945865..150945896,- | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-21!180;CL:0000183!2.19e-16!59;CL:0000680!6.58e-16!57;CL:0000056!6.58e-16!57;CL:0000355!6.58e-16!57;CL:0000187!1.64e-15!54;CL:0000393!3.09e-14!60;CL:0000211!3.09e-14!60;CL:0000192!1.80e-13!42;CL:0000514!1.80e-13!42;CL:0000359!3.14e-11!32;CL:0000057!4.53e-07!75;CL:0000220!7.23e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.58e-16;32!CL:0000192;3.68e-13;43!CL:0000187;1.63e-10;55!CL:0000393;4.34e-09;61!CL:0000211;4.34e-09;61!CL:0002594;3.75e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.40e-19,58;CL:0000056,3.40e-19,58;CL:0000355,3.40e-19,58;CL:0000187,1.11e-17,55;CL:0000359,5.17e-17,32;CL:0000192,2.22e-16,43;CL:0000514,2.22e-16,43;CL:0000393,2.63e-16,61;CL:0000211,2.63e-16,61;CL:0002594,4.21e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000514;3.68e-13;43!CL:0000355;3.06e-11;58!UBERON:0005062;5.71e-07;4!UBERON:0007284;5.71e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!6.68e-19!63;UBERON:0001015!6.68e-19!63;UBERON:0000383!6.68e-19!63;UBERON:0001134!1.31e-18!61;UBERON:0002036!1.31e-18!61;UBERON:0003082!1.31e-18!61;UBERON:0004290!5.20e-18!70;UBERON:0000914!1.51e-16!83;UBERON:0002329!1.51e-16!83;UBERON:0003077!1.51e-16!83;UBERON:0003059!1.51e-16!83;UBERON:0007282!1.51e-16!83;UBERON:0009618!1.51e-16!83;UBERON:0007285!1.51e-16!83;UBERON:0000486!3.54e-14!82;UBERON:0002100!2.24e-13!216;UBERON:0001637!7.71e-13!42;UBERON:0003509!7.71e-13!42;UBERON:0004572!7.71e-13!42;UBERON:0000490!9.91e-13!138;UBERON:0001981!3.48e-12!60;UBERON:0007500!3.48e-12!60;UBERON:0004537!3.48e-12!60;UBERON:0006965!3.48e-12!60;UBERON:0004872!3.74e-12!84;UBERON:0005256!1.01e-11!143;UBERON:0000481!8.15e-11!347;UBERON:0003914!1.31e-10!118;UBERON:0000475!1.84e-10!365;UBERON:0003104!3.67e-10!238;UBERON:0009142!3.67e-10!238;UBERON:0007100!6.25e-10!27;UBERON:0002049!2.06e-09!79;UBERON:0007798!2.06e-09!79;UBERON:0000055!2.07e-09!69;UBERON:0000119!2.46e-09!312;UBERON:0004573!3.73e-09!33;UBERON:0004571!3.73e-09!33;UBERON:0000483!6.17e-09!309;UBERON:0001009!1.03e-08!113;UBERON:0000468!1.89e-08!659;UBERON:0000948!5.20e-08!24;UBERON:0005498!5.20e-08!24;UBERON:0004140!5.20e-08!24;UBERON:0009881!5.20e-08!24;UBERON:0004141!5.20e-08!24;UBERON:0003084!5.20e-08!24;UBERON:0007005!5.20e-08!24;UBERON:0004139!5.20e-08!24;UBERON:0004291!5.20e-08!24;UBERON:0004535!1.49e-07!110;UBERON:0003103!9.84e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.11e-15;42!UBERON:0003509;1.11e-15;42!UBERON:0004572;1.11e-15;42!UBERON:0004573;3.56e-11;33!UBERON:0004571;3.56e-11;33!UBERON:0003688;4.55e-11;6!UBERON:0002358;4.55e-11;6!UBERON:0003684;4.55e-11;6!UBERON:0001178;4.55e-11;6!UBERON:0001134;2.81e-09;16!UBERON:0002036;2.81e-09;16!UBERON:0007100;3.14e-09;25!UBERON:0004457;3.65e-09;9!UBERON:0000042;3.65e-09;9!UBERON:0007500;8.78e-09;56!UBERON:0001981;8.78e-09;56!UBERON:0004537;8.78e-09;56!UBERON:0002385;1.63e-08;31!UBERON:0001015;1.63e-08;31!UBERON:0000383;1.63e-08;31!UBERON:0001310;3.75e-08;4!UBERON:0010313;3.88e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.83e-24,62;UBERON:0002036,2.83e-24,62;UBERON:0003082,2.83e-24,62;UBERON:0002385,3.59e-23,64;UBERON:0001015,3.59e-23,64;UBERON:0000383,3.59e-23,64;UBERON:0007524,5.29e-23,73;UBERON:0002329,1.62e-22,71;UBERON:0003059,1.62e-22,71;UBERON:0007282,1.62e-22,71;UBERON:0004290,1.62e-22,71;UBERON:0009618,1.62e-22,71;UBERON:0001637,3.11e-22,42;UBERON:0003509,3.11e-22,42;UBERON:0004572,3.11e-22,42;UBERON:0003077,4.81e-22,72;UBERON:0007285,4.81e-22,72;UBERON:0007503,1.78e-19,78;UBERON:0000486,7.43e-19,83;UBERON:0007500,1.70e-17,59;UBERON:0001981,1.70e-17,59;UBERON:0004537,1.70e-17,59;UBERON:0006965,1.70e-17,59;UBERON:0005256,2.98e-15,122;UBERON:0000055,3.05e-15,68;UBERON:0004872,4.62e-15,83;UBERON:0003104,1.47e-14,160;UBERON:0009142,1.47e-14,160;UBERON:0004573,1.13e-13,33;UBERON:0004571,1.13e-13,33;UBERON:0003914,2.24e-13,117;UBERON:0002049,3.31e-13,78;UBERON:0007798,3.31e-13,78;UBERON:0002100,3.64e-13,199;UBERON:0001009,4.69e-13,112;UBERON:0000490,2.02e-12,148;UBERON:0007100,4.01e-11,27;UBERON:0003688,5.86e-11,6;UBERON:0002358,5.86e-11,6;UBERON:0003684,5.86e-11,6;UBERON:0001178,5.86e-11,6;UBERON:0004535,8.67e-11,109;UBERON:0004797,1.78e-10,7;UBERON:0001310,4.21e-08,4;UBERON:0000948,1.09e-07,24;UBERON:0005498,1.09e-07,24;UBERON:0004140,1.09e-07,24;UBERON:0009881,1.09e-07,24;UBERON:0004141,1.09e-07,24;UBERON:0003084,1.09e-07,24;UBERON:0007005,1.09e-07,24;UBERON:0004139,1.09e-07,24;UBERON:0004291,1.09e-07,24;UBERON:0010313,5.39e-07,10;UBERON:0002342,5.39e-07,10;UBERON:0005062,5.39e-07,10;UBERON:0000483,7.01e-07,306 | |||
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| |||
|short_description=p4@SMARCD3 | |||
}} |
Revision as of 00:01, 14 September 2013
Short description: | p4@SMARCD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SMARCD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_ENST00000472988_5end |
EntrezGene: | SMARCD3 |
HGNC: | 11108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.40e-19 | 58 |
myoblast | 3.40e-19 | 58 |
multi-potent skeletal muscle stem cell | 3.40e-19 | 58 |
muscle cell | 1.11e-17 | 55 |
vascular associated smooth muscle cell | 5.17e-17 | 32 |
smooth muscle cell | 2.22e-16 | 43 |
smooth muscle myoblast | 2.22e-16 | 43 |
electrically responsive cell | 2.63e-16 | 61 |
electrically active cell | 2.63e-16 | 61 |
smooth muscle cell of the umbilical artery | 4.21e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.