FFCP PHASE1:Hg19::chr11:7695039..7695048,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24376 | |||
|TSSclassifier=strong | |||
|UniProt=E9PRM4 | |||
|association_with_transcript=-38bp_to_ENST00000436351_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_17_at_CYB5R2_5end | |||
|id=chr11:7695039..7695048,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.58e-50;1!UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10!UBERON:0003056;1.12e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-19!115;UBERON:0000073!4.70e-18!94;UBERON:0001016!4.70e-18!94;UBERON:0001049!1.48e-17!57;UBERON:0005068!1.48e-17!57;UBERON:0006241!1.48e-17!57;UBERON:0007135!1.48e-17!57;UBERON:0005162!1.91e-17!2;UBERON:0000122!1.91e-17!2;UBERON:0002616!6.64e-17!59;UBERON:0000955!1.71e-16!69;UBERON:0006238!1.71e-16!69;UBERON:0001017!5.78e-16!82;UBERON:0005743!3.99e-15!86;UBERON:0001872!9.08e-15!5;UBERON:0002780!5.28e-14!41;UBERON:0001890!5.28e-14!41;UBERON:0006240!5.28e-14!41;UBERON:0003080!1.20e-13!42;UBERON:0003075!4.77e-13!86;UBERON:0007284!4.77e-13!86;UBERON:0002346!2.25e-12!90;UBERON:0000988!1.43e-11!3;UBERON:0003056!3.34e-11!61;UBERON:0002791!1.30e-10!33;UBERON:0002020!2.67e-10!34;UBERON:0003528!2.67e-10!34;UBERON:0001893!2.75e-10!34;UBERON:0004121!2.90e-10!169;UBERON:0004732!5.11e-10!13;UBERON:0000924!5.84e-10!173;UBERON:0006601!5.84e-10!173;UBERON:0000033!7.25e-10!123;UBERON:0000941!1.03e-09!1;UBERON:0004904!1.03e-09!1;UBERON:0002464!1.03e-09!1;UBERON:0001021!1.03e-09!1;UBERON:0001785!1.03e-09!1;UBERON:0002171!1.43e-09!1;UBERON:0006518!1.43e-09!1;UBERON:0008949!1.43e-09!1;UBERON:0000101!1.43e-09!1;UBERON:0002167!1.43e-09!1;UBERON:0002336!1.84e-09!1;UBERON:0001018!1.84e-09!1;UBERON:0002473!1.84e-09!1;UBERON:0005340!1.84e-09!1;UBERON:0002316!1.84e-09!1;UBERON:0003544!1.84e-09!1;UBERON:0001020!1.84e-09!1;UBERON:0005970!1.84e-09!1;UBERON:0002437!1.84e-09!1;UBERON:0002298!2.14e-09!8;UBERON:0002022!2.35e-09!1;UBERON:0001301!2.55e-09!1;UBERON:0000153!2.67e-09!129;UBERON:0007811!2.67e-09!129;UBERON:0001950!2.81e-09!20;UBERON:0002581!4.87e-09!1;UBERON:0001882!5.28e-09!1;UBERON:0005403!5.28e-09!1;UBERON:0002619!1.87e-08!22;UBERON:0001869!4.04e-08!32;UBERON:0000956!1.85e-07!25;UBERON:0000203!1.85e-07!25;UBERON:0003135!2.60e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.58e-50;1!UBERON:0001785;6.58e-50;1!UBERON:0002464;6.58e-50;1!UBERON:0004904;6.58e-50;1!UBERON:0001021;6.58e-50;1!UBERON:0000473;8.65e-26;8!UBERON:0003714;9.18e-26;2!UBERON:0005162;9.18e-26;2!UBERON:0000122;9.18e-26;2!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0000010;8.85e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.58e-50,1;UBERON:0001785,6.58e-50,1;UBERON:0002464,6.58e-50,1;UBERON:0004904,6.58e-50,1;UBERON:0001021,6.58e-50,1;UBERON:0003902,6.58e-50,1;UBERON:0005425,6.58e-50,1;UBERON:0000473,8.65e-26,8;UBERON:0003714,9.18e-26,2;UBERON:0005162,9.18e-26,2;UBERON:0000122,9.18e-26,2;UBERON:0003135,4.28e-19,11;UBERON:0001781,1.29e-13,4;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6;UBERON:0000010,8.85e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77405798774908,7.77095977452918,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@CYB5R2 | |||
}} |
Revision as of 06:26, 11 January 2014
Short description: | p17@CYB5R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CYB5R2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -38bp_to_ENST00000436351_5end |
EntrezGene: | CYB5R2 |
HGNC: | 24376 |
UniProt: | E9PRM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.58e-50 | 1 |
cranial nerve | 6.58e-50 | 1 |
nerve trunk | 6.58e-50 | 1 |
nerve connecting eye with brain | 6.58e-50 | 1 |
nerve | 6.58e-50 | 1 |
retinal neural layer | 6.58e-50 | 1 |
presumptive neural retina | 6.58e-50 | 1 |
testis | 8.65e-26 | 8 |
neural tissue | 9.18e-26 | 2 |
multi cell component structure | 9.18e-26 | 2 |
neuron projection bundle | 9.18e-26 | 2 |
male reproductive organ | 4.28e-19 | 11 |
layer of retina | 1.29e-13 | 4 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
peripheral nervous system | 8.85e-07 | 8 |