FFCP PHASE1:Hg19::chr12:113682304..113682315,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53373 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18182 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000428632_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_17_at_TPCN1_5end | |||
|id=chr12:113682304..113682315,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.34e-35!57;UBERON:0005068!3.34e-35!57;UBERON:0006241!3.34e-35!57;UBERON:0007135!3.34e-35!57;UBERON:0002616!6.29e-34!59;UBERON:0004733!1.49e-31!12;UBERON:0002028!1.49e-31!12;UBERON:0007277!1.49e-31!12;UBERON:0004732!4.51e-29!13;UBERON:0000955!3.38e-28!69;UBERON:0006238!3.38e-28!69;UBERON:0005743!4.08e-28!86;UBERON:0001017!1.98e-26!82;UBERON:0003075!2.52e-25!86;UBERON:0007284!2.52e-25!86;UBERON:0000073!3.41e-25!94;UBERON:0001016!3.41e-25!94;UBERON:0003076!4.23e-25!15;UBERON:0003057!4.23e-25!15;UBERON:0000349!4.76e-25!5;UBERON:0002346!4.55e-24!90;UBERON:0007023!3.89e-23!115;UBERON:0002680!4.57e-22!9;UBERON:0001895!4.57e-22!9;UBERON:0010092!4.57e-22!9;UBERON:0000033!9.16e-19!123;UBERON:0000153!9.53e-18!129;UBERON:0007811!9.53e-18!129;UBERON:0001954!5.32e-17!2;UBERON:0003022!5.32e-17!2;UBERON:0002421!5.32e-17!2;UBERON:0002600!5.32e-17!2;UBERON:0002791!1.07e-16!33;UBERON:0002780!2.15e-16!41;UBERON:0001890!2.15e-16!41;UBERON:0006240!2.15e-16!41;UBERON:0001893!3.49e-16!34;UBERON:0002020!3.56e-16!34;UBERON:0003528!3.56e-16!34;UBERON:0003080!5.62e-16!42;UBERON:0002298!7.77e-16!8;UBERON:0002619!1.96e-15!22;UBERON:0004121!2.42e-14!169;UBERON:0000924!6.20e-14!173;UBERON:0006601!6.20e-14!173;UBERON:0001869!1.26e-13!32;UBERON:0000956!1.45e-13!25;UBERON:0000203!1.45e-13!25;UBERON:0003056!7.16e-13!61;UBERON:0002037!9.10e-13!6;UBERON:0006215!9.10e-13!6;UBERON:0000988!2.15e-11!3;UBERON:0001896!2.26e-11!3;UBERON:0005290!2.26e-11!3;UBERON:0010096!2.26e-11!3;UBERON:0003112!4.54e-09!1;UBERON:0000032!4.54e-09!1;UBERON:0005253!4.54e-09!1;UBERON:0003128!4.54e-09!1;UBERON:0002241!4.54e-09!1;UBERON:0001703!4.54e-09!1;UBERON:0004761!4.54e-09!1;UBERON:0009617!4.54e-09!1;UBERON:0001871!4.58e-09!7;UBERON:0002336!5.31e-09!1;UBERON:0001018!5.31e-09!1;UBERON:0002473!5.31e-09!1;UBERON:0005340!5.31e-09!1;UBERON:0002316!5.31e-09!1;UBERON:0003544!5.31e-09!1;UBERON:0001020!5.31e-09!1;UBERON:0005970!5.31e-09!1;UBERON:0002437!5.31e-09!1;UBERON:0001950!9.36e-09!20;UBERON:0001882!9.91e-09!1;UBERON:0005403!9.91e-09!1;UBERON:0002022!1.16e-08!1;UBERON:0000025!2.83e-08!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.25e-09;53!UBERON:0002616;8.25e-09;53!UBERON:0001016;9.26e-08;83!UBERON:0000955;1.67e-07;68!UBERON:0001017;8.52e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,3.05163472634166,3.53853631779919,2.06883333267483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@TPCN1 | |||
}} |
Revision as of 16:02, 11 January 2014
Short description: | p17@TPCN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TPCN1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000428632_5end |
EntrezGene: | TPCN1 |
HGNC: | 18182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |