FFCP PHASE1:Hg19::chr17:36609957..36609978,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3626 | |||
|description=CAGE_peak_at_chr17:36609957..36609978,+ | |||
|id=chr17:36609957..36609978,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.14e-26!119;CL:0000220!2.88e-25!246;CL:0002321!9.34e-25!248;CL:0000066!8.52e-19!254;CL:0000076!1.07e-18!62;CL:0000055!2.51e-18!180;CL:0000213!9.57e-17!57;CL:0000215!9.57e-17!57;CL:0000183!2.95e-11!59;CL:0000057!4.44e-11!75;CL:0002078!4.60e-11!44;CL:0000115!5.80e-10!35;CL:0002139!3.39e-09!24;CL:0000187!3.97e-09!54;CL:0000680!6.68e-09!57;CL:0000056!6.68e-09!57;CL:0000355!6.68e-09!57;CL:0000071!1.01e-08!18;CL:0002546!1.01e-08!18;CL:0000077!1.21e-08!19;CL:0000192!1.92e-08!42;CL:0000514!1.92e-08!42;CL:0000393!3.00e-07!60;CL:0000211!3.00e-07!60;CL:1000449!9.08e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000213;5.01e-10;58!CL:0000215;5.01e-10;58!CL:0000076;1.06e-09;63!CL:0002139;2.43e-09;24!CL:0000115;6.65e-09;36!CL:0000071;7.01e-09;18!CL:0000077;7.03e-09;19!CL:0002078;6.95e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.49e-27,121;CL:0002321,3.91e-24,250;CL:0000076,3.54e-19,63;CL:0000066,7.31e-18,253;CL:0000213,1.68e-17,58;CL:0000215,1.68e-17,58;CL:0002078,1.26e-11,45;CL:0000057,2.10e-11,76;CL:0000115,9.94e-11,36;CL:0000187,1.41e-09,55;CL:0000680,2.43e-09,58;CL:0000056,2.43e-09,58;CL:0000355,2.43e-09,58;CL:0002139,2.44e-09,24;CL:0000192,6.86e-09,43;CL:0000514,6.86e-09,43;CL:0000071,7.46e-09,18;CL:0002546,7.46e-09,18;CL:0000077,7.61e-09,19;CL:0000393,1.41e-07,61;CL:0000211,1.41e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;7.01e-09;18!CL:0000222;1.54e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.64e-18!312;UBERON:0000483!9.66e-18!309;UBERON:0000481!2.10e-17!347;UBERON:0002049!2.34e-17!79;UBERON:0007798!2.34e-17!79;UBERON:0000475!3.30e-17!365;UBERON:0003914!1.97e-16!118;UBERON:0000477!1.68e-15!286;UBERON:0005256!4.53e-15!143;UBERON:0003104!8.40e-15!238;UBERON:0009142!8.40e-15!238;UBERON:0004872!8.55e-15!84;UBERON:0000055!3.22e-14!69;UBERON:0002100!1.54e-13!216;UBERON:0001981!4.11e-13!60;UBERON:0007500!4.11e-13!60;UBERON:0004537!4.11e-13!60;UBERON:0006965!4.11e-13!60;UBERON:0000490!7.75e-13!138;UBERON:0000468!1.44e-12!659;UBERON:0000486!3.73e-12!82;UBERON:0004111!3.78e-12!241;UBERON:0000467!9.35e-12!625;UBERON:0000480!1.70e-11!626;UBERON:0001009!4.04e-11!113;UBERON:0000914!5.03e-11!83;UBERON:0002329!5.03e-11!83;UBERON:0003077!5.03e-11!83;UBERON:0003059!5.03e-11!83;UBERON:0007282!5.03e-11!83;UBERON:0009618!5.03e-11!83;UBERON:0007285!5.03e-11!83;UBERON:0004535!9.77e-11!110;UBERON:0000064!1.42e-10!219;UBERON:0004290!1.08e-09!70;UBERON:0003102!3.70e-09!95;UBERON:0001986!1.01e-08!18;UBERON:0004638!1.01e-08!18;UBERON:0004852!1.01e-08!18;UBERON:0001637!1.18e-08!42;UBERON:0003509!1.18e-08!42;UBERON:0004572!1.18e-08!42;UBERON:0000025!1.71e-08!194;UBERON:0003103!4.97e-08!69;UBERON:0001134!5.39e-08!61;UBERON:0002036!5.39e-08!61;UBERON:0003082!5.39e-08!61;UBERON:0000487!6.81e-08!22;UBERON:0000923!7.70e-08!604;UBERON:0005291!7.70e-08!604;UBERON:0006598!7.70e-08!604;UBERON:0002532!7.70e-08!604;UBERON:0002050!9.21e-08!605;UBERON:0005423!9.21e-08!605;UBERON:0002385!1.11e-07!63;UBERON:0001015!1.11e-07!63;UBERON:0000383!1.11e-07!63;UBERON:0006914!1.66e-07!25;UBERON:0001444!1.67e-07!48;UBERON:0000922!2.06e-07!612;UBERON:0004119!3.53e-07!169;UBERON:0000925!3.53e-07!169;UBERON:0006595!3.53e-07!169;UBERON:0004211!9.08e-07!16;UBERON:0001285!9.08e-07!16;UBERON:0007684!9.08e-07!16;UBERON:0003220!9.08e-07!16;UBERON:0004208!9.08e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.01e-09;18!UBERON:0001986;7.01e-09;18!UBERON:0004852;7.01e-09;18!UBERON:0003914;1.87e-08;74!UBERON:0007500;4.45e-08;56!UBERON:0001981;4.45e-08;56!UBERON:0004537;4.45e-08;56!UBERON:0000487;4.47e-08;22!UBERON:0000490;9.06e-08;33!UBERON:0002049;1.14e-07;75!UBERON:0007798;1.14e-07;75!UBERON:0000055;1.80e-07;65!UBERON:0006914;1.95e-07;25!UBERON:0001637;7.27e-07;42!UBERON:0003509;7.27e-07;42!UBERON:0004572;7.27e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.16e-17,78;UBERON:0007798,1.16e-17,78;UBERON:0000119,2.35e-17,309;UBERON:0000483,1.34e-16,306;UBERON:0003914,2.32e-16,117;UBERON:0000490,5.96e-15,148;UBERON:0004872,6.68e-15,83;UBERON:0000055,1.63e-14,68;UBERON:0003104,1.15e-13,160;UBERON:0009142,1.15e-13,160;UBERON:0007500,2.42e-13,59;UBERON:0001981,2.42e-13,59;UBERON:0004537,2.42e-13,59;UBERON:0006965,2.42e-13,59;UBERON:0007503,1.62e-12,78;UBERON:0000486,2.24e-12,83;UBERON:0002100,4.96e-12,199;UBERON:0005256,7.94e-12,122;UBERON:0001009,1.16e-11,112;UBERON:0004535,2.87e-11,109;UBERON:0004111,3.19e-11,240;UBERON:0007524,4.26e-10,73;UBERON:0002329,5.02e-10,71;UBERON:0003059,5.02e-10,71;UBERON:0007282,5.02e-10,71;UBERON:0004290,5.02e-10,71;UBERON:0009618,5.02e-10,71;UBERON:0003077,9.71e-10,72;UBERON:0007285,9.71e-10,72;UBERON:0003102,2.19e-09,99;UBERON:0004638,7.46e-09,18;UBERON:0001986,7.46e-09,18;UBERON:0004852,7.46e-09,18;UBERON:0001637,8.71e-09,42;UBERON:0003509,8.71e-09,42;UBERON:0004572,8.71e-09,42;UBERON:0001134,2.74e-08,62;UBERON:0002036,2.74e-08,62;UBERON:0003082,2.74e-08,62;UBERON:0000487,4.49e-08,22;UBERON:0002385,5.74e-08,64;UBERON:0001015,5.74e-08,64;UBERON:0000383,5.74e-08,64;UBERON:0003103,8.89e-08,68;UBERON:0001444,1.68e-07,49;UBERON:0000025,1.83e-07,192;UBERON:0006914,1.85e-07,25;UBERON:0000033,5.80e-07,56;UBERON:0004923,5.84e-07,66 | |||
|phase1_expression=5.63202975738726,3.63970890614671,5.49722175974288,5.00366491765652,1.78784437770915,5.23403114460221,2.53299878168311,1.89515962028049,0,10.8122932060664,23.7252397110625,7.8638893966862,6.59417445571134,10.643906354564,13.5872924048445,10.0848771967766,6.62963980826375,14.6062018077475,6.8310591830671,8.37223194922158,26.1120884792644,13.1650983020797,2.28988789704845,2.6006140763848,4.2684497462233,0,0.0821005894499457,0,0,0,0.154816123316076,22.9855306119732,18.9759728830298,12.5716363456708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0.419317291016752,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,12.0726154746655,14.4484694883189,18.7948359239974,21.0561922467074,22.7409034768493,1.5905718941022,6.32625331393427,8.60266836193017,8.86917589850256,11.5063569257995,4.1913304159268,27.3221466219407,16.3145154825149,0,0,0,0,0,0,18.2861414777369,14.6239881168041,19.4398680900253,27.7000891542765,36.0769515140519,26.4113320262465,24.0344211517332,17.5723396235144,14.2306505074684,5.69025041699939,12.4877088303836,23.5684352772739,53.4495906030491,15.0741862941806,18.6332648012805,23.1286296255767,19.7585847911029,20.9457353698979,27.596994743859,32.2750324253164,15.5721482340846,0,0,25.293455024267,26.8364853915472,8.99076632818516,2.1185468930115,6.3104056564739,15.9600771989261,21.86642640555,20.2823091886439,20.2267389702071,26.4529380089801,13.0669351907597,17.0000379237997,13.0167387774641,8.64263886719998,15.4652145010306,15.9201639183463,14.8322673601557,13.4503812496621,5.51942143625695,5.98929894162087,7.58434356192142,8.16616685019573,10.8094199234356,6.40619843289746,4.75201142912821,16.5668842616633,24.5743567723267,42.3984703671581,5.72342787443825,6.88151859295803,13.8532057742091,17.9980824561144,15.63087758575,16.5261864797256,20.1909286024837,19.0153013830194,27.3353457687766,16.1068244881267,8.40255069036326,17.4158774412962,11.8514648420989,32.5704498580282,3.03797398034279,6.33340533547791,9.59248342127635,28.6275184777551,17.1344820227941,7.4552014428489,15.2135668323737,19.6690287080166,19.519346169493,14.1827982707234,15.7742527463952,1.34171076742555,0.530119073285941,0.69716365721711,2.59152637538426,1.00928340350251,0,14.0804579096834,67.540298510253,29.0083334840209,34.8275946023984,28.1532997851138,8.6363964029086,9.4407426443737,5.06123162755312,8.38234192766194,9.15093665188106,6.16903609688851,6.47190279168789,6.67152981426177,6.15595451114225,51.6708818237254,30.8531902367581,45.6847152577854,58.8034845542168,0,0,3.54473944008842,0,6.64137568132813,12.5244501517924,6.03626569747441,26.9764207818287,4.32274581370013,22.7767575089983,15.3129903495853,28.0782392025486,15.8764476227801,4.63721619900307,9.7449216215732,12.7042474029745,9.25971025153221,10.4639783729029,0,0,0,0,0,10.3107217385455,1.84780341018745,7.79763034833126,0.358234090811393,0.871901815541886,1.91691339582606,0,0,0.207328115540772,0.144119953416961,0.37872730027914,0.317489471460845,0.763976851116555,0,8.55362230113526,2.15937734676979,7.50857644609794,0,21.5291681943093,10.0270815831654,18.8479394559842,16.8053230485111,28.6125156681506,2.535908257668,25.2641210755627,37.4426772880918,16.4612719527771,34.0437916855868,26.6422179016099,14.8697113404473,19.5343777940919,6.58592269424615,5.86325131728723,12.4387182059891,5.543663110534,23.5122714106477,19.1737360892065,62.1832005152395,0,0,0,19.4096132948182,16.0806710167759,4.27910715122155,2.02693829334611,17.0545347716818,1.96967059563885,0,0,0,0,0.76228387266739,0,0,0.335032530668698,0,0,0,0,15.827202431769,17.5059682370887,10.0368058768902,34.1072212910524,31.938788994692,33.1175071571263,25.4196870534188,38.8220468648757,31.8370505678379,49.6670742204024,19.2625423575277,13.0902109664609,21.981554460425,69.5094108992729,25.3926133620033,0,0,0,5.15316871458641,6.65741758041988,5.44302527993425,7.93944985020086,4.910783145218,8.98112302185835,9.35415789566617,11.2575594794675,7.72098821489316,10.3892646511494,6.16838775210622,5.50441348470694,5.09188367285617,3.11552657510173,5.22946703069817,6.04297247958111,11.6293752775905,3.86740153530765,13.6629193315882,9.650831904356,17.1772983596846,27.9743760002595,12.7845459593329,29.0209414595436,24.8436681910543,5.69978796021529,20.4720091327614,23.9832124439887,11.8753753856177,29.303178011155,24.9270722540345,25.5861784665975,13.253566198342,20.7769002232181,10.074363962498,1.09629938322967,0.784306353074702,17.6950586330309,40.6738160667635,37.7438937810591,5.04900957073839,6.13515414282901,4.29049399587058,6.3169209179579,2.60024098414608,16.068392984416,6.57360884386429,5.85384745035649,3.68408819342711,7.99452120410277,4.94133126394059,11.0212687374814,8.77834262385839,10.9509403845487,10.5782345831026,17.1049159954944,13.3993348119313,8.80072693443284,7.90237433805386,5.35180989612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| |||
|short_description=p@chr17:36609957..36609978,+ | |||
}} |
Revision as of 14:53, 20 January 2014
Short description: | p@chr17:36609957..36609978, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:36609957..36609978, + |
Coexpression cluster: | C3626_Pericytes_oral_Hair_Hepatic_Endothelial_Mesothelial_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.49e-27 | 121 |
embryonic cell | 3.91e-24 | 250 |
squamous epithelial cell | 3.54e-19 | 63 |
epithelial cell | 7.31e-18 | 253 |
lining cell | 1.68e-17 | 58 |
barrier cell | 1.68e-17 | 58 |
meso-epithelial cell | 1.26e-11 | 45 |
fibroblast | 2.10e-11 | 76 |
endothelial cell | 9.94e-11 | 36 |
muscle cell | 1.41e-09 | 55 |
muscle precursor cell | 2.43e-09 | 58 |
myoblast | 2.43e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.43e-09 | 58 |
endothelial cell of vascular tree | 2.44e-09 | 24 |
smooth muscle cell | 6.86e-09 | 43 |
smooth muscle myoblast | 6.86e-09 | 43 |
blood vessel endothelial cell | 7.46e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.46e-09 | 18 |
mesothelial cell | 7.61e-09 | 19 |
electrically responsive cell | 1.41e-07 | 61 |
electrically active cell | 1.41e-07 | 61 |