FFCP PHASE1:Hg19::chr17:79826634..79826655,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=396 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=678 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-135bp_to_BC007630_5end | |||
|description=CAGE_peak_20_at_ARHGDIA_5end | |||
|id=chr17:79826634..79826655,- | |||
|ontology_enrichment_celltype=CL:0000222!1.56e-07!119;CL:0000071!4.72e-07!18;CL:0002546!4.72e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.79e-09;18!CL:1000413;3.94e-08;9!CL:0000115;8.92e-08;36!CL:0000359;1.10e-07;32!CL:0002139;1.57e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.95e-09,36;CL:0000071,2.44e-09,18;CL:0002546,2.44e-09,18;CL:1000413,2.39e-08,9;CL:0000359,6.97e-08,32;CL:0002139,1.94e-07,24;CL:0000222,4.17e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;2.79e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.11e-13!84;UBERON:0001981!7.18e-12!60;UBERON:0007500!7.18e-12!60;UBERON:0004537!7.18e-12!60;UBERON:0006965!7.18e-12!60;UBERON:0001637!5.62e-10!42;UBERON:0003509!5.62e-10!42;UBERON:0004572!5.62e-10!42;UBERON:0000055!5.78e-10!69;UBERON:0003914!9.37e-09!118;UBERON:0002049!3.07e-08!79;UBERON:0007798!3.07e-08!79;UBERON:0000926!9.67e-08!448;UBERON:0004120!9.67e-08!448;UBERON:0006603!9.67e-08!448;UBERON:0004573!3.24e-07!33;UBERON:0004571!3.24e-07!33;UBERON:0001986!4.72e-07!18;UBERON:0004638!4.72e-07!18;UBERON:0004852!4.72e-07!18;UBERON:0003081!5.07e-07!216;UBERON:0000487!7.27e-07!22;UBERON:0004535!8.53e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;5.89e-12;56!UBERON:0001981;5.89e-12;56!UBERON:0004537;5.89e-12;56!UBERON:0001637;2.23e-11;42!UBERON:0003509;2.23e-11;42!UBERON:0004572;2.23e-11;42!UBERON:0004638;2.79e-09;18!UBERON:0001986;2.79e-09;18!UBERON:0004852;2.79e-09;18!UBERON:0004573;5.80e-09;33!UBERON:0004571;5.80e-09;33!UBERON:0003513;1.40e-08;7!UBERON:0000490;1.52e-08;33!UBERON:0000487;1.76e-08;22!UBERON:0000055;2.06e-08;65!UBERON:0003915;3.94e-08;9!UBERON:0004700;3.94e-08;9!UBERON:0001917;3.94e-08;9!UBERON:0006914;4.10e-07;25!UBERON:0003914;4.63e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,4.72e-18,59;UBERON:0001981,4.72e-18,59;UBERON:0004537,4.72e-18,59;UBERON:0006965,4.72e-18,59;UBERON:0004872,1.30e-17,83;UBERON:0001637,1.19e-15,42;UBERON:0003509,1.19e-15,42;UBERON:0004572,1.19e-15,42;UBERON:0000055,1.72e-15,68;UBERON:0003914,5.61e-14,117;UBERON:0002049,2.87e-13,78;UBERON:0007798,2.87e-13,78;UBERON:0000490,1.92e-12,148;UBERON:0000926,3.86e-11,315;UBERON:0004120,3.86e-11,315;UBERON:0006603,3.86e-11,315;UBERON:0003081,9.90e-11,203;UBERON:0004535,1.02e-10,109;UBERON:0001009,3.64e-10,112;UBERON:0004573,3.79e-10,33;UBERON:0004571,3.79e-10,33;UBERON:0004638,2.44e-09,18;UBERON:0001986,2.44e-09,18;UBERON:0004852,2.44e-09,18;UBERON:0000487,1.23e-08,22;UBERON:0003513,2.32e-08,7;UBERON:0000483,2.36e-08,306;UBERON:0003915,2.39e-08,9;UBERON:0004700,2.39e-08,9;UBERON:0001917,2.39e-08,9;UBERON:0000119,4.11e-08,309;UBERON:0004111,4.66e-08,240;UBERON:0005256,9.17e-08,122;UBERON:0000025,1.14e-07,192;UBERON:0000923,1.23e-07,560;UBERON:0010316,1.23e-07,560;UBERON:0005291,1.23e-07,560;UBERON:0006598,1.23e-07,560;UBERON:0010317,1.23e-07,560;UBERON:0002532,1.23e-07,560;UBERON:0002050,2.10e-07,564;UBERON:0006914,3.04e-07,25;UBERON:0002100,3.10e-07,199;UBERON:0007503,3.35e-07,78;UBERON:0005423,7.67e-07,581 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.704772020479856,2.00146596706261,1.78784437770915,0,0,0,1.30592814099919,0.245733936501509,2.79120467188971,0.436882744260345,0.527533956456907,0.37129905888014,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.612002073732759,0.313454721478088,0,0,0.376627918784408,0.382067028739756,0.246301768349837,0.157421562627358,0.393364276848904,0.383829398097213,0.154816123316076,2.75826367343678,2.409647350226,2.58827807116751,0.154934401160603,0,0,0,0.802177789880567,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0.726991193897824,0.377875943688809,0.485168122375632,0.697287110717054,0.411167888021826,0.619412741790207,1.7261543539329,0.256160706529101,0,2.06847408441971,0.645484683583826,0,1.69418105588344,1.09162460023138,0.224723484445085,0.918251677112708,0.320929027076094,0,0.329851300186716,1.19678194572979,0,0.580418477257168,0,1.24564449799115,0.75374599577023,0,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0,0.336985893439485,0.600707571366025,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.786021525498329,0,0.167186495390678,0,0,0,0.557052284425868,0.589211814949674,0,0,0.384273959177026,0,0.164437904603676,0,0.289803085735052,0.14828656316206,0.535081656179426,0,0.113309342697566,0.766440987203842,0.34362744548263,0.253019692019503,0.95569624297229,0,0,0,0,0,0,0,0.80642697289893,0.534880391567015,0.579297615531196,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.579386075843295,0.795285947051099,0.486634870302636,0,0,0.175669571386252,0.392937226493138,0.364295288292542,0.741568885568859,0,0.348259474598534,0.398873881556595,0,0.571994910780128,0,1.98762407366705,1.72046919021225,0.347140501607594,1.13061588384802,1.25849830862972,1.10047216776027,2.08994966536811,0,0,0,0.805658634218294,2.28081631715554,0.732186172644509,0,2.43042584364528,0.625098097988558,0.673588117878509,0.337834441449967,3.06633274931766,3.79706263827252,1.09921046358244,0,0,0,0,1.01304409331664,0.132409180813219,0.573673241497627,1.06400514659507,0.560677600142307,1.06748995729705,1.72667283892012,0.622422070799533,0.808264032418128,0.653847612453835,0.151357427644931,0,0,0.936480230490962,1.71141546463335,0.448346041655403,1.29177948508141,1.61872944368132,0.702254033511242,0.204154171254893,0,0.413303124703062,0,1.97813543422845,0,0.718618141816238,0,0.875829639103749,0.277064115484183,0.877955241761676,0.919463387397059,1.65261864797256,0.113432183160021,0.538168907066586,0.213557388818567,0,0.900273288253207,0.206105058476878,0.772921620136887,0.37223371266318,0.506328996723799,0.487185025805993,0,0.0920498986422993,0.161646056818812,0.710019185033229,0.302256294682921,0.169560592310488,1.15956511897978,0.818238361772504,0.573609190778008,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0,0.241011029883482,0.330881918197182,0.435758888184812,0.237270619111097,0.269662616320329,0,0,2.21446636387394,2.80483547606892,0,0,2.53510069643662,0,1.77236972004421,0,0,0.171567810298526,0.329250856225877,1.1240175325762,0.804231779293047,0.555530670951178,0.325808305310325,1.03993478527958,0,0,0,1.01056513432752,0.925971025153221,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.567100388969546,0.179117045405697,0,1.15014803749563,0,0.968532774145487,2.48793738648926,1.15295962733569,1.76739406796932,0.063497894292169,1.52795370223311,11.7217447210047,5.13217338068116,1.02827492703324,0.600686115687835,0.571652865261156,0.448524337381443,0.87192013766656,0.07333828582095,0,0,1.690605505112,0.797814349754612,1.04007436911366,0.257207374262142,0,0.532844358032199,0,0.542621605391443,0,0.65147236858747,0.355391948742546,1.58390374586686,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0.718874566474748,1.14861935834114,0,0.723906533337896,0.410952645100767,0,0,0,0.431255149719035,0.385029108839245,0.508189248444927,0,0,0,0,0,2.99161459204025,0.414415513436035,0.12269149171914,0.500170521059677,0.813795071099207,0.207970861530807,0.535286966391485,0.157702415033935,0,1.50473049863859,11.3703752027992,3.10419213877515,0,1.47495334833363,1.04260337361699,0.587403472388222,1.02943027143257,0.206768026122887,0,0.640365346820666,1.21251028578504,1.66435439510497,0.604780586659361,0.744323423456331,0,0.841980283299221,0.896974044789907,1.02341449813341,0.482561763430822,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0.813472649219715,0.483437798366489,2.00506470303285,0.920809889358963,0.34444334449382,0.546273504020151,1.44236856455367,0,0.308061348417659,0,0,0.422206515571503,0,0.850468526382578,0.215915916102139,4.62681758070868,0,1.50506932156456,0,0.831076008928724,0.447749509444357,0.219259876645935,0,0,0,0.325378394664303,0.618246069886334,0.732555718546747,0.165018999841176,1.14853107599234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|short_description=p20@ARHGDIA | |||
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Revision as of 18:02, 20 January 2014
Short description: | p20@ARHGDIA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_ARHGDIA_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.95e-09 | 36 |
blood vessel endothelial cell | 2.44e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.44e-09 | 18 |
endothelial cell of artery | 2.39e-08 | 9 |
vascular associated smooth muscle cell | 6.97e-08 | 32 |
endothelial cell of vascular tree | 1.94e-07 | 24 |
mesodermal cell | 4.17e-07 | 121 |