FFCP PHASE1:Hg19::chr18:13612668..13612678,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_at_chr18:13612668..13612678,+ | |||
|id=chr18:13612668..13612678,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.41e-07!182;CL:0000542!4.89e-07!53;CL:0000051!4.89e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002032;6.82e-13;1!CL:0000557;6.82e-13;1!CL:0001014;3.09e-07;2!CL:0001016;3.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.09e-07,2;CL:0001016,3.09e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!2.40e-08!10;DOID:2531!6.65e-08!51;DOID:0060083!6.65e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:6193;3.33e-13;1!DOID:0060060;6.82e-13;1!DOID:0060061;6.82e-13;1!DOID:8691;6.82e-13;1!DOID:3350;3.09e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.95e-13,1;DOID:0060060,6.82e-13,1;DOID:0060061,6.82e-13,1;DOID:8691,6.82e-13,1;DOID:3350,2.91e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.78e-21!57;UBERON:0005068!3.78e-21!57;UBERON:0006241!3.78e-21!57;UBERON:0007135!3.78e-21!57;UBERON:0002616!6.05e-17!59;UBERON:0002780!1.38e-16!41;UBERON:0001890!1.38e-16!41;UBERON:0006240!1.38e-16!41;UBERON:0003080!4.50e-16!42;UBERON:0007023!1.57e-15!115;UBERON:0000955!1.08e-14!69;UBERON:0006238!1.08e-14!69;UBERON:0001893!1.67e-14!34;UBERON:0002020!2.64e-14!34;UBERON:0003528!2.64e-14!34;UBERON:0001017!1.38e-13!82;UBERON:0002791!3.70e-13!33;UBERON:0005743!1.24e-12!86;UBERON:0001869!7.33e-12!32;UBERON:0003075!1.18e-11!86;UBERON:0007284!1.18e-11!86;UBERON:0002308!4.23e-11!9;UBERON:0000125!4.23e-11!9;UBERON:0002346!7.76e-11!90;UBERON:0000073!8.68e-11!94;UBERON:0001016!8.68e-11!94;UBERON:0003056!1.52e-09!61;UBERON:0002298!1.92e-09!8;UBERON:0002420!2.11e-08!9;UBERON:0007245!2.11e-08!9;UBERON:0010009!2.11e-08!9;UBERON:0010011!2.11e-08!9;UBERON:0000454!2.11e-08!9;UBERON:0002619!4.74e-08!22;UBERON:0000153!9.08e-08!129;UBERON:0007811!9.08e-08!129;UBERON:0009663!1.40e-07!7;UBERON:0000988!1.58e-07!3;UBERON:0001950!2.12e-07!20;UBERON:0006331!3.93e-07!3;UBERON:0000956!6.94e-07!25;UBERON:0000203!6.94e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.01e-25;2!UBERON:0005058;9.01e-25;2!UBERON:0009113;9.01e-25;2!UBERON:0002336;6.82e-13;1!UBERON:0011215;6.82e-13;1!UBERON:0001018;6.82e-13;1!UBERON:0002473;6.82e-13;1!UBERON:0005340;6.82e-13;1!UBERON:0003544;6.82e-13;1!UBERON:0005970;6.82e-13;1!UBERON:0002316;6.82e-13;1!UBERON:0001020;6.82e-13;1!UBERON:0002437;6.82e-13;1!UBERON:0002390;1.01e-11;32!UBERON:0002331;4.02e-11;10!UBERON:0004177;1.69e-10;5!UBERON:0005057;1.69e-10;5!UBERON:0000178;1.37e-07;15!UBERON:0000179;1.37e-07;15!UBERON:0000463;1.37e-07;15!UBERON:0005162;4.42e-07;2!UBERON:0000122;4.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,4.77e-13,1;UBERON:0011215,4.77e-13,1;UBERON:0001018,4.77e-13,1;UBERON:0002473,4.77e-13,1;UBERON:0005340,4.77e-13,1;UBERON:0003544,4.77e-13,1;UBERON:0005970,4.77e-13,1;UBERON:0002316,4.77e-13,1;UBERON:0001020,4.77e-13,1;UBERON:0002437,4.77e-13,1;UBERON:0002370,7.26e-13,4;UBERON:0005058,7.26e-13,4;UBERON:0009113,7.26e-13,4;UBERON:0003295,7.26e-13,4;UBERON:0005562,7.26e-13,4;UBERON:0002331,3.50e-11,10;UBERON:0000358,3.50e-11,10;UBERON:0000307,3.50e-11,10;UBERON:0000091,3.50e-11,10;UBERON:0000087,3.50e-11,10;UBERON:0007010,3.50e-11,10;UBERON:0007806,3.50e-11,10;UBERON:0008780,3.50e-11,10;UBERON:0005728,3.50e-11,10;UBERON:0003351,7.05e-09,6;UBERON:0004177,9.88e-08,7;UBERON:0005057,9.88e-08,7;UBERON:0000178,1.25e-07,15;UBERON:0000179,1.25e-07,15;UBERON:0000463,1.25e-07,15;UBERON:0005162,3.70e-07,2;UBERON:0000122,3.70e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0.426507697462265,0.880801318004542,0,0,0,0,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4780405847809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,3.69937585411753,0.318852545457645,0,0.5745161103971,0.423347165447766,0,0.561594356226918,0.456469358066384,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,1.11321717794222,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85477467284809,1.72989514525104,1.67075119208729,1.81983059047828,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,2.92376255201748,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,2.4747128070665,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,0.13223260174269,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0.558867626472451,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0.513833800771676,0,0,0.205116364240755,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0,0.634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0.475788130837822,0.526182188502793,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.128915775947154,0.499705779624645,0,0,0,0,0,0.143339583151451,1.10440093535229,0.339957450954573,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0.829169439458779,0.310298987585686,0,0.23806443146374,3.81074568032436,2.29676442894674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.320568492303233 | |||
|short_description=p@chr18:13612668..13612678,+ | |||
}} |
Revision as of 18:41, 20 January 2014
Short description: | p@chr18:13612668..13612678, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:13612668..13612678, + |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.09e-07 | 2 |
immature CD1a-positive Langerhans cell | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 4.77e-13 | 1 |
central nervous system cell part cluster | 4.77e-13 | 1 |
axon tract | 4.77e-13 | 1 |
intercerebral commissure | 4.77e-13 | 1 |
dorsal telencephalic commissure | 4.77e-13 | 1 |
brain white matter | 4.77e-13 | 1 |
brain commissure | 4.77e-13 | 1 |
white matter | 4.77e-13 | 1 |
nervous system commissure | 4.77e-13 | 1 |
cerebral hemisphere white matter | 4.77e-13 | 1 |
thymus | 7.26e-13 | 4 |
hemolymphoid system gland | 7.26e-13 | 4 |
thymic region | 7.26e-13 | 4 |
pharyngeal gland | 7.26e-13 | 4 |
thymus primordium | 7.26e-13 | 4 |
umbilical cord | 3.50e-11 | 10 |
blastocyst | 3.50e-11 | 10 |
blastula | 3.50e-11 | 10 |
bilaminar disc | 3.50e-11 | 10 |
inner cell mass | 3.50e-11 | 10 |
cleaving embryo | 3.50e-11 | 10 |
connecting stalk | 3.50e-11 | 10 |
inner cell mass derived epiblast | 3.50e-11 | 10 |
extraembryonic mesoderm | 3.50e-11 | 10 |
pharyngeal epithelium | 7.05e-09 | 6 |
hemopoietic organ | 9.88e-08 | 7 |
immune organ | 9.88e-08 | 7 |
blood | 1.25e-07 | 15 |
haemolymphatic fluid | 1.25e-07 | 15 |
organism substance | 1.25e-07 | 15 |
multi cell component structure | 3.70e-07 | 2 |
neuron projection bundle | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.95e-13 | 1 |
non-Hodgkin lymphoma | 6.82e-13 | 1 |
cutaneous T cell lymphoma | 6.82e-13 | 1 |
mycosis fungoides | 6.82e-13 | 1 |
mesenchymal cell neoplasm | 2.91e-07 | 2 |