FFCP PHASE1:Hg19::chr1:29064167..29064196,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr1:29064167..29064196,- | |||
|id=chr1:29064167..29064196,- | |||
|ontology_enrichment_celltype=CL:0000066!1.55e-12!254;CL:0000039!1.16e-07!7;CL:0000586!1.16e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.37e-29;7!CL:0000586;2.37e-29;7!CL:0002322;2.04e-28;5!CL:0002321;4.25e-13;15!CL:0002591;8.00e-07;1!CL:0000313;8.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.02e-29,7;CL:0000586,1.02e-29,7;CL:0002322,7.42e-29,5;CL:0000313,4.25e-07,1;CL:0002591,8.98e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.48e-14;10!UBERON:0005564;2.48e-14;10!UBERON:0008801;8.00e-07;1!UBERON:0005425;8.00e-07;1 | |||
|ontology_enrichment_disease=DOID:305!3.82e-21!106;DOID:0050687!2.18e-20!143;DOID:162!1.66e-16!235;DOID:14566!2.44e-15!239;DOID:299!1.23e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.28e-15;22!DOID:2994;1.28e-15;22!DOID:1799;8.00e-07;1!DOID:10165;8.00e-07;1!DOID:2152;8.00e-07;1!DOID:1798;8.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.13e-15,22;DOID:2994,1.13e-15,22;DOID:2152,4.25e-07,1;DOID:1799,4.51e-07,1;DOID:10165,4.51e-07,1;DOID:1798,4.51e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000464!2.02e-07!104;UBERON:0004921!2.15e-07!129;UBERON:0004185!2.15e-07!129;UBERON:0001041!3.70e-07!98;UBERON:0001007!4.04e-07!155;UBERON:0001555!4.04e-07!155;UBERON:0007026!4.04e-07!155;UBERON:0000466!5.15e-07!126;UBERON:0000077!6.33e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;3.58e-13;11!UBERON:0000473;5.99e-12;8!UBERON:0000922;2.48e-09;49!UBERON:0001000;3.36e-07;1!UBERON:0005352;3.36e-07;1!UBERON:0001831;8.00e-07;1!UBERON:0000941;8.00e-07;1!UBERON:0004911;8.00e-07;1!UBERON:0001785;8.00e-07;1!UBERON:0002464;8.00e-07;1!UBERON:0004904;8.00e-07;1!UBERON:0001021;8.00e-07;1!UBERON:0001567;8.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,3.06e-13,11;UBERON:0000473,5.02e-12,8;UBERON:0002553,1.72e-07,61;UBERON:0001000,3.36e-07,1;UBERON:0005352,3.36e-07,1;UBERON:0004911,4.25e-07,1;UBERON:0000941,5.69e-07,1;UBERON:0001785,5.69e-07,1;UBERON:0002464,5.69e-07,1;UBERON:0004904,5.69e-07,1;UBERON:0001021,5.69e-07,1;UBERON:0003902,5.69e-07,1;UBERON:0005425,5.69e-07,1;UBERON:0000991,8.94e-07,21;UBERON:0009196,8.94e-07,21;UBERON:0009117,8.94e-07,21;UBERON:0005564,8.94e-07,21 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0.655324116390517,0.263766978228454,0.247532705920093,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0.229240217243854,0.0821005894499457,0.157421562627358,0.393364276848904,0,0,0,0,0,0.154934401160603,0,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.289648807765598,0,0,0,0,0,0.289693037921647,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0.523916301990851,0.364295288292542,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.976248230192678,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.193260853163297,0,0,2.80539524098069,2.38553582978673,2.09149097165133,1.45125477021519,1.51392510525377,0.72995471815166,0,0,0,0,0,0.118306800039844,0.505754070234305,0.482022059766964,0.110293972732394,0.435758888184812,0.237270619111097,0,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.966875596732978,0.40101294060657,0,0,0,0,0.451199612907412,0.539107359730903,0.784349769176855,0,0.211103257785751,0,0,0,0,1.08378575017541,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.309123034943167,0.457847324091717,0.330037999682352,0,0,0,0.290012154876366,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.576570202095319,0,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0.379473173765715,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.185803175125719,0,0.142283686696828,0,0,0.383010740264733,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0.242721043499027,0.222886768554957,0,0,0,0.614321404198464,0,0.140669416410513,0.333926115068718,0,0.422250816255987,0.19924798825107,0,0.503865495708552,0.102268682502155,0.123084805461069,0,0.179736702294654,0.716084698702437,0.511572370226872,0.394573622547734,0,0,0,0,0,0.7812832832557,0.174919999992391,0,0,0.508507300585533,0.472775363535873,0.689486746482929,0,0.520874984799877,0,0.241192877250816,0,0,0,0.219385397153973,0.762569244632931,0.139423744278603,0.0769502585037971,0,0.922255617552241,2.2439411102443,1.84700532267414,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0.498635045700469,0.451191321234361,0.19606253431774,0.671286347903371,0.37950746544837,0,0.210998064528027,1.30586246527318,0,0.216388639742091,0.995261931078505,0.0884575645033392,1.22206028986725,0.889563386041866,0.370691816839509,0.626531697032732,0.134802265961354,0,0,0.547364367646998,0,0.485560759068186,2.36750641709634,0,0.61214552326098,0,3.15679180770434,0.72581733978073,0.664653872707185,0,0,1.19472429772959,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0.34945333648406,0,0.677294319023596,0.877071805034227,0.492692742319255,0.0969890164884194,0.617792886840502,0,0,0,0,0.977756913674015,0,0.640358984218058,0.39961921916426,0.288180834308212,0.114536596165916,0,0,0,1.17847017308398,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,10.4846354574708,1.10296455230113,0.906574442192831,0.808842526250219,0.295282444544246,0.169346664131569,0,0,1.12527203925513,0.825236619583403,1.24632101408756,0.2249738915515,0,0,0,0.394028536495991,0.786818822024972,0.105600336519406,0,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0,0,0.339936274560377,0,0,0.258565912723101,0.26446520348538,0.171086837884329,0.704815022316672,0.747511887973863,0.628817220398664,0.414239055347196,0.496166021811951,0,0.243585196761792,0.638341257770182,0,0.2506898940227,0,0.327872630709804,0.471162288750703,0,0,0.1251909307065,0,0.110929051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| |||
|short_description=p@chr1:29064167..29064196,- | |||
}} |
Revision as of 17:27, 10 January 2014
Short description: | p@chr1:29064167..29064196, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:29064167..29064196, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.02e-29 | 7 |
germ cell | 1.02e-29 | 7 |
embryonic stem cell | 7.42e-29 | 5 |
serous secreting cell | 4.25e-07 | 1 |
smooth muscle cell of the pulmonary artery | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 3.06e-13 | 11 |
testis | 5.02e-12 | 8 |
anatomical cavity | 1.72e-07 | 61 |
vas deferens | 3.36e-07 | 1 |
spermatic cord | 3.36e-07 | 1 |
epithelium of female gonad | 4.25e-07 | 1 |
cranial nerve II | 5.69e-07 | 1 |
cranial nerve | 5.69e-07 | 1 |
nerve trunk | 5.69e-07 | 1 |
nerve connecting eye with brain | 5.69e-07 | 1 |
nerve | 5.69e-07 | 1 |
retinal neural layer | 5.69e-07 | 1 |
presumptive neural retina | 5.69e-07 | 1 |
gonad | 8.94e-07 | 21 |
indifferent external genitalia | 8.94e-07 | 21 |
indifferent gonad | 8.94e-07 | 21 |
gonad primordium | 8.94e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.13e-15 | 22 |
germ cell cancer | 1.13e-15 | 22 |
ovary epithelial cancer | 4.25e-07 | 1 |
islet cell tumor | 4.51e-07 | 1 |
endocrine pancreas cancer | 4.51e-07 | 1 |
pancreatic endocrine carcinoma | 4.51e-07 | 1 |