FFCP PHASE1:Hg19::chr2:11886710..11886776,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23175 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13345 | |||
|TSSclassifier=strong | |||
|UniProt=Q14693,C9J278,C9IYP2 | |||
|association_with_transcript=0bp_to_ENST00000256720,ENST00000423495,ENST00000441684,NM_145693,uc002rbt.2_5end | |||
|description=CAGE_peak_1_at_LPIN1_5end | |||
|id=chr2:11886710..11886776,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.65e-08!42;CL:0000860!1.48e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.81e-10;33!CL:0002057;1.81e-10;33!CL:0000473;2.23e-08;39!CL:0000234;2.23e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.65e-08,42;CL:0002057,2.65e-08,42;CL:0000473,4.88e-08,48;CL:0000234,4.88e-08,48 | |||
|ontology_enrichment_development_v019=CL:0002057;7.28e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.36e-15!115;UBERON:0001049!9.57e-15!57;UBERON:0005068!9.57e-15!57;UBERON:0006241!9.57e-15!57;UBERON:0007135!9.57e-15!57;UBERON:0000153!1.97e-14!129;UBERON:0007811!1.97e-14!129;UBERON:0002616!5.20e-14!59;UBERON:0000033!1.68e-13!123;UBERON:0000955!2.02e-12!69;UBERON:0006238!2.02e-12!69;UBERON:0003080!6.62e-11!42;UBERON:0003075!9.59e-11!86;UBERON:0007284!9.59e-11!86;UBERON:0002780!2.29e-10!41;UBERON:0001890!2.29e-10!41;UBERON:0006240!2.29e-10!41;UBERON:0001017!9.34e-10!82;UBERON:0004121!1.29e-09!169;UBERON:0003056!1.36e-09!61;UBERON:0005743!1.69e-09!86;UBERON:0002346!2.50e-09!90;UBERON:0002020!1.03e-08!34;UBERON:0003528!1.03e-08!34;UBERON:0000924!1.05e-08!173;UBERON:0006601!1.05e-08!173;UBERON:0000073!1.79e-08!94;UBERON:0001016!1.79e-08!94;UBERON:0001893!5.18e-08!34;UBERON:0001869!5.83e-08!32;UBERON:0002791!7.99e-08!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.61e-08;53!UBERON:0002616;1.61e-08;53!UBERON:0003528;1.04e-07;34!UBERON:0002020;1.04e-07;34!UBERON:0002780;1.30e-07;41!UBERON:0001890;1.30e-07;41!UBERON:0002791;2.45e-07;32!UBERON:0001869;3.06e-07;32!UBERON:0001893;3.65e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.75e-15,114;UBERON:0001049,3.44e-14,56;UBERON:0005068,3.44e-14,56;UBERON:0006241,3.44e-14,56;UBERON:0007135,3.44e-14,56;UBERON:0000073,1.03e-13,53;UBERON:0002616,1.03e-13,53;UBERON:0000955,6.28e-12,68;UBERON:0006238,6.28e-12,68;UBERON:0003075,2.59e-11,82;UBERON:0007284,2.59e-11,82;UBERON:0010371,1.18e-10,104;UBERON:0002780,2.29e-10,41;UBERON:0001890,2.29e-10,41;UBERON:0003080,2.29e-10,41;UBERON:0006240,2.29e-10,41;UBERON:0002346,8.37e-10,86;UBERON:0001017,2.47e-09,81;UBERON:0004121,3.29e-09,171;UBERON:0000924,3.29e-09,171;UBERON:0006601,3.29e-09,171;UBERON:0003056,3.60e-09,61;UBERON:0010314,6.58e-09,132;UBERON:0003528,1.03e-08,34;UBERON:0002020,1.03e-08,34;UBERON:0001016,2.81e-08,89;UBERON:0001893,5.18e-08,34;UBERON:0002791,5.19e-08,32;UBERON:0001869,5.83e-08,32 | |||
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| |||
|short_description=p1@LPIN1 | |||
}} |
Revision as of 01:46, 21 January 2014
Short description: | p1@LPIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000256720, ENST00000423495, ENST00000441684, NM_145693, uc002rbt.2_5end |
EntrezGene: | LPIN1 |
HGNC: | 13345 |
UniProt: | Q14693C9J278C9IYP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.65e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.65e-08 | 42 |
defensive cell | 4.88e-08 | 48 |
phagocyte | 4.88e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.75e-15 | 114 |
neural tube | 3.44e-14 | 56 |
neural rod | 3.44e-14 | 56 |
future spinal cord | 3.44e-14 | 56 |
neural keel | 3.44e-14 | 56 |
regional part of nervous system | 1.03e-13 | 53 |
regional part of brain | 1.03e-13 | 53 |
brain | 6.28e-12 | 68 |
future brain | 6.28e-12 | 68 |
neural plate | 2.59e-11 | 82 |
presumptive neural plate | 2.59e-11 | 82 |
ecto-epithelium | 1.18e-10 | 104 |
regional part of forebrain | 2.29e-10 | 41 |
forebrain | 2.29e-10 | 41 |
anterior neural tube | 2.29e-10 | 41 |
future forebrain | 2.29e-10 | 41 |
neurectoderm | 8.37e-10 | 86 |
central nervous system | 2.47e-09 | 81 |
ectoderm-derived structure | 3.29e-09 | 171 |
ectoderm | 3.29e-09 | 171 |
presumptive ectoderm | 3.29e-09 | 171 |
pre-chordal neural plate | 3.60e-09 | 61 |
structure with developmental contribution from neural crest | 6.58e-09 | 132 |
brain grey matter | 1.03e-08 | 34 |
gray matter | 1.03e-08 | 34 |
nervous system | 2.81e-08 | 89 |
telencephalon | 5.18e-08 | 34 |
regional part of telencephalon | 5.19e-08 | 32 |
cerebral hemisphere | 5.83e-08 | 32 |