FFCP PHASE1:Hg19::chr3:112360200..112360221,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |||
|TSSclassifier=strong | |||
|UniProt=Q76M96 | |||
|association_with_transcript=-53bp_to_ENST00000439685_5end | |||
|description=CAGE_peak_20_at_CCDC80_5end | |||
|id=chr3:112360200..112360221,- | |||
|ontology_enrichment_celltype=CL:0000055!2.94e-27!180;CL:0000680!2.35e-20!57;CL:0000056!2.35e-20!57;CL:0000355!2.35e-20!57;CL:0000187!1.17e-19!54;CL:0000183!9.93e-17!59;CL:0000393!3.30e-16!60;CL:0000211!3.30e-16!60;CL:0000192!4.87e-15!42;CL:0000514!4.87e-15!42;CL:0000359!1.85e-14!32;CL:0000057!2.95e-12!75;CL:0000048!2.05e-09!430;CL:0000136!2.10e-09!15;CL:0002334!6.09e-09!12;CL:0000723!8.81e-09!436;CL:0000034!5.57e-08!444;CL:0000222!6.66e-07!119;CL:0002494!9.76e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.01e-12;12!CL:0000153;7.28e-10;9!CL:0000447;7.28e-10;9!CL:1000306;2.60e-09;4!CL:0002547;2.60e-09;4!CL:0000327;4.65e-09;15!CL:0000499;5.41e-09;28!CL:0000138;3.66e-08;6!CL:0002579;9.92e-08;3!CL:0002615;1.09e-07;3!CL:0000136;2.40e-07;13!CL:0002580;4.65e-07;3!CL:0000359;6.17e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.48e-12,12;CL:0000057,3.93e-12,76;CL:0000048,1.95e-10,427;CL:0000153,3.40e-10,9;CL:0000447,3.40e-10,9;CL:0000723,5.00e-10,433;CL:0000136,8.21e-10,15;CL:0000034,1.68e-09,441;CL:1000306,2.64e-09,4;CL:0002547,2.64e-09,4;CL:0000327,2.83e-09,15;CL:0000499,3.54e-09,28;CL:0000680,1.52e-08,58;CL:0000056,1.52e-08,58;CL:0000355,1.52e-08,58;CL:0000058,1.95e-08,6;CL:0000138,1.95e-08,6;CL:0000187,3.18e-08,55;CL:0002579,1.09e-07,3;CL:0002615,1.27e-07,3;CL:0000359,1.96e-07,32;CL:0002580,4.77e-07,3;CL:0000393,5.72e-07,61;CL:0000211,5.72e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!7.67e-19!63;UBERON:0001015!7.67e-19!63;UBERON:0000383!7.67e-19!63;UBERON:0001134!5.45e-18!61;UBERON:0002036!5.45e-18!61;UBERON:0003082!5.45e-18!61;UBERON:0000914!2.66e-16!83;UBERON:0002329!2.66e-16!83;UBERON:0003077!2.66e-16!83;UBERON:0003059!2.66e-16!83;UBERON:0007282!2.66e-16!83;UBERON:0009618!2.66e-16!83;UBERON:0007285!2.66e-16!83;UBERON:0004290!1.87e-15!70;UBERON:0000486!3.74e-14!82;UBERON:0004872!5.63e-14!84;UBERON:0001637!8.87e-12!42;UBERON:0003509!8.87e-12!42;UBERON:0004572!8.87e-12!42;UBERON:0007100!4.55e-11!27;UBERON:0000948!6.60e-11!24;UBERON:0005498!6.60e-11!24;UBERON:0004140!6.60e-11!24;UBERON:0009881!6.60e-11!24;UBERON:0004141!6.60e-11!24;UBERON:0003084!6.60e-11!24;UBERON:0007005!6.60e-11!24;UBERON:0004139!6.60e-11!24;UBERON:0004291!6.60e-11!24;UBERON:0005256!6.58e-10!143;UBERON:0001009!8.50e-10!113;UBERON:0004573!1.02e-09!33;UBERON:0004571!1.02e-09!33;UBERON:0004535!2.07e-09!110;UBERON:0001981!3.12e-09!60;UBERON:0007500!3.12e-09!60;UBERON:0004537!3.12e-09!60;UBERON:0006965!3.12e-09!60;UBERON:0002100!1.39e-08!216;UBERON:0002049!3.78e-08!79;UBERON:0007798!3.78e-08!79;UBERON:0000490!4.67e-08!138;UBERON:0003688!1.08e-07!6;UBERON:0002358!1.08e-07!6;UBERON:0003684!1.08e-07!6;UBERON:0001178!1.08e-07!6;UBERON:0001013!1.09e-07!14;UBERON:0003914!1.33e-07!118;UBERON:0001135!4.67e-07!15;UBERON:0000055!9.57e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.11e-15;9!UBERON:0000042;9.11e-15;9!UBERON:0003688;9.47e-14;6!UBERON:0002358;9.47e-14;6!UBERON:0003684;9.47e-14;6!UBERON:0001178;9.47e-14;6!UBERON:0004797;2.60e-09;4!UBERON:0000415;2.60e-09;4!UBERON:0007240;2.60e-09;4!UBERON:0005742;2.60e-09;4!UBERON:0005734;2.60e-09;4!UBERON:0004664;2.60e-09;4!UBERON:0004663;2.60e-09;4!UBERON:0004905;8.01e-09;8!UBERON:0000982;8.01e-09;8!UBERON:0004770;8.01e-09;8!UBERON:0001013;1.41e-07;14!UBERON:0000948;1.42e-07;22!UBERON:0011135;4.08e-07;5!UBERON:0002216;4.08e-07;5!UBERON:0011134;4.08e-07;5!UBERON:0002209;4.08e-07;5!UBERON:0002213;4.08e-07;5!UBERON:0007844;4.08e-07;5!UBERON:0011138;4.08e-07;5!UBERON:0001130;4.08e-07;5!UBERON:0001066;4.08e-07;5!UBERON:0001468;4.08e-07;5!UBERON:0004573;7.64e-07;33!UBERON:0004571;7.64e-07;33!UBERON:0001637;8.03e-07;42!UBERON:0003509;8.03e-07;42!UBERON:0004572;8.03e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.20e-13,6;UBERON:0002358,1.20e-13,6;UBERON:0003684,1.20e-13,6;UBERON:0001178,1.20e-13,6;UBERON:0004872,1.42e-11,83;UBERON:0004797,7.45e-11,7;UBERON:0004457,1.19e-10,12;UBERON:0000042,1.19e-10,12;UBERON:0001637,1.33e-09,42;UBERON:0003509,1.33e-09,42;UBERON:0004572,1.33e-09,42;UBERON:0000415,2.64e-09,4;UBERON:0007240,2.64e-09,4;UBERON:0005742,2.64e-09,4;UBERON:0005734,2.64e-09,4;UBERON:0004664,2.64e-09,4;UBERON:0004663,2.64e-09,4;UBERON:0004905,8.80e-09,8;UBERON:0000982,8.80e-09,8;UBERON:0004770,8.80e-09,8;UBERON:0000948,2.19e-08,24;UBERON:0005498,2.19e-08,24;UBERON:0004140,2.19e-08,24;UBERON:0009881,2.19e-08,24;UBERON:0004141,2.19e-08,24;UBERON:0003084,2.19e-08,24;UBERON:0007005,2.19e-08,24;UBERON:0004139,2.19e-08,24;UBERON:0004291,2.19e-08,24;UBERON:0001134,1.12e-07,62;UBERON:0002036,1.12e-07,62;UBERON:0003082,1.12e-07,62;UBERON:0001013,1.52e-07,14;UBERON:0004573,1.54e-07,33;UBERON:0004571,1.54e-07,33;UBERON:0003914,1.75e-07,117;UBERON:0007500,1.76e-07,59;UBERON:0001981,1.76e-07,59;UBERON:0004537,1.76e-07,59;UBERON:0006965,1.76e-07,59;UBERON:0007524,1.90e-07,73;UBERON:0002385,2.73e-07,64;UBERON:0001015,2.73e-07,64;UBERON:0000383,2.73e-07,64;UBERON:0007100,3.56e-07,27;UBERON:0011135,5.56e-07,5;UBERON:0002216,5.56e-07,5;UBERON:0011134,5.56e-07,5;UBERON:0002209,5.56e-07,5;UBERON:0002213,5.56e-07,5;UBERON:0005856,5.56e-07,5;UBERON:0005866,5.56e-07,5;UBERON:0005863,5.56e-07,5;UBERON:0007844,5.56e-07,5;UBERON:0011138,5.56e-07,5;UBERON:0001130,5.56e-07,5;UBERON:0001066,5.56e-07,5;UBERON:0001468,5.56e-07,5;UBERON:0002384,7.12e-07,371;UBERON:0002329,7.23e-07,71;UBERON:0003059,7.23e-07,71;UBERON:0007282,7.23e-07,71;UBERON:0004290,7.23e-07,71;UBERON:0009618,7.23e-07,71 | |||
|phase1_expression=3.45188920614058,3.8538094300377,18.7469357447642,3.00219895059391,7.15137751083661,6.97870819280295,0,0.631719873426831,1.56711376919903,0,0,0,0,3.58922423584135,4.30816588446291,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,6.26526553033299,1.80719576192283,5.51471701699479,2.89693037921647,2.3858578411533,1.94653948121054,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4666914686485,12.7896816781226,1.45650098894541,11.7603014507014,6.02936249737207,6.72813120170769,0,0.24666754841716,20.8511393717843,0,0.490385709340376,0.605429710579726,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,1.75591048352335,1.83892677479412,0.600952235626387,0.794025282120147,2.15267562826634,1.92201649936711,1.27159140695737,1.80054657650641,0.515262646192195,0,0.558350568994769,1.5189869901714,0.487185025805993,0.252433774244115,0.736399189138395,0.80823028409406,1.06502877754984,0.705264687593482,3.73033303083073,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0.07333828582095,0.258543431515556,3.57656445851882,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,1.71573592389777,0,0,0,1.06617584622764,0,0.904318131178758,0,0,0,0,0,2.87549826589899,0,0,1.88215698667853,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,9.81531933753119,1.00034104211935,0.271265023699736,1.66376689224646,0.535286966391485,0.630809660135739,0.585707074963566,8.12554469264841,0,0,4.64957918974806,0.921845842708516,0.0868836144680828,0,0,0,0,0,0,0,1.20956117331872,6.94701861892575,2.455391572609,2.24528075546459,27.5499170899757,3.07024349440022,8.36440389946759,2.96836132889982,0.308419387605311,1.06537035187876,1.23190734020714,0,0.232420756919918,0,0,0,3.09999010044438,0.364182336013434,2.22911505431021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0.27470839445503,0.082509499920588,0,0,3.21367859688319,0.386682873168488,0.616194468458578,0.767518373630648,0.137836572484531,2.14840489736547,0.725083469571143,0.170453254832202,2.67096106940212,0,0,0,0,1.85938219718914,8.18512101759664,0,0.308033580176089,0.532306030317022,0.869932992075073,2.40921484835096,1.14499909393593,0.372158369359667,0.316379424718726,0.762520775695299,0,1.71175595213568,4.45484547096312,0,0.899362287916574,0.54907405947211,0.706874414074119,0.808729926293264,1.58510321173008,0,0,0.487426979262569,1.05650146756755,2.8664981395677,0.565621727814851,4.52032466480971,0.551365343546124,3.3171948762061,3.5076070820301,0,0,1.42037263873893,1.239293992399,0.563391205064483,0,0.589494246078727,2.1400263088875,0.354761064070598,2.11107635297664,1.97576935775941,0,0.349934720244983,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,4.11842208584752,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,3.33410970433911,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,2.33790344625405,0,0,0,0,0,0,0,0,0,0,0.870592065804026,1.7472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,5.86493042671734,1.83328339209347,0,0,0.429226048136571,0.446342914883745,0.806201669840715,4.32359860250884,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.7520696820681,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,1.16856654923612,1.10961172300523,0,1.25783950876288,2.66943366478961,0.915360273587694,5.74677510300308,0.466311601748341,0.73927574994817,0.159296767163702,0.449803112163605,0.155262956876259,0,0.265841714557995,0.521745061811734,0.150257608997218,1.14241563650639,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0,0,1.37358282073117,1.6837474438296,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,6.99609571437521,0,0,6.70084293012299,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0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| |||
|short_description=p20@CCDC80 | |||
}} |
Revision as of 20:33, 21 January 2014
Short description: | p20@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_CCDC80_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_ENST00000439685_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | Q76M96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.48e-12 | 12 |
fibroblast | 3.93e-12 | 76 |
multi fate stem cell | 1.95e-10 | 427 |
GAG secreting cell | 3.40e-10 | 9 |
carbohydrate secreting cell | 3.40e-10 | 9 |
somatic stem cell | 5.00e-10 | 433 |
fat cell | 8.21e-10 | 15 |
stem cell | 1.68e-09 | 441 |
fibroblast of tunica adventitia of artery | 2.64e-09 | 4 |
fibroblast of the aortic adventitia | 2.64e-09 | 4 |
extracellular matrix secreting cell | 2.83e-09 | 15 |
stromal cell | 3.54e-09 | 28 |
muscle precursor cell | 1.52e-08 | 58 |
myoblast | 1.52e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.52e-08 | 58 |
chondroblast | 1.95e-08 | 6 |
chondrocyte | 1.95e-08 | 6 |
muscle cell | 3.18e-08 | 55 |
omentum preadipocyte | 1.09e-07 | 3 |
adipocyte of omentum tissue | 1.27e-07 | 3 |
vascular associated smooth muscle cell | 1.96e-07 | 32 |
preadipocyte of the breast | 4.77e-07 | 3 |
electrically responsive cell | 5.72e-07 | 61 |
electrically active cell | 5.72e-07 | 61 |