FFCP PHASE1:Mm9::chr13:24923457..24923508,-: Difference between revisions
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{{FFCP|EntrezGene=66834|HGNC=|MCL_coexpression_id=1|UniProt=Q9CQR4|association_with_transcript=-71bp_to_ENSMUST00000006900_5end|description=CAGE_peak_3_at_Acot13_5end|id=chr13:24923457..24923508,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.12e-12!63;UBERON:0001049!3.61e-12!52;UBERON:0005068!3.61e-12!52;UBERON:0006241!3.61e-12!52;UBERON:0007135!3.61e-12!52;UBERON:0000955!8.41e-12!50;UBERON:0006238!8.41e-12!50;UBERON:0002020!8.51e-12!34;UBERON:0002616!2.64e-11!49;UBERON:0002791!6.20e-10!29;UBERON:0003528!6.20e-10!29;UBERON:0001893!6.20e-10!29;UBERON:0002346!9.70e-10!71;UBERON:0003075!9.70e-10!71;UBERON:0007284!9.70e-10!71;UBERON:0001017!2.89e-09!73;UBERON:0005743!2.89e-09!73;UBERON:0000073!3.30e-09!75;UBERON:0001016!3.30e-09!75;UBERON:0003056!4.88e-09!49;UBERON:0003080!9.45e-09!40;UBERON:0002780!3.20e-08!39;UBERON:0001890!3.20e-08!39;UBERON:0006240!3.20e-08!39;UBERON:0004121!9.59e-08!102;UBERON:0000924!9.59e-08!102;UBERON:0006601!9.59e-08!102;UBERON:0002619!1.33e-07!17;UBERON:0002021!1.72e-07!10;UBERON:0000411!1.72e-07!10;UBERON:0001950!1.72e-07!10;UBERON:0004111!5.85e-07!122;UBERON:0000956!8.53e-07!21;UBERON:0001869!8.53e-07!21;UBERON:0000203!8.53e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.45e-15,54;UBERON:0001049,8.57e-14,52;UBERON:0005068,8.57e-14,52;UBERON:0006241,8.57e-14,52;UBERON:0007135,8.57e-14,52;UBERON:0002020,1.69e-13,34;UBERON:0002346,3.94e-13,64;UBERON:0003075,3.94e-13,64;UBERON:0007284,3.94e-13,64;UBERON:0000955,1.67e-11,47;UBERON:0006238,1.67e-11,47;UBERON:0003528,2.76e-11,29;UBERON:0002791,2.76e-11,29;UBERON:0001893,2.76e-11,29;UBERON:0002616,6.07e-11,46;UBERON:0010314,6.49e-11,92;UBERON:0001017,7.75e-11,73;UBERON:0010371,1.44e-10,73;UBERON:0001016,1.84e-10,75;UBERON:0003056,4.66e-10,49;UBERON:0003080,1.04e-09,40;UBERON:0004121,1.23e-09,95;UBERON:0000924,1.23e-09,95;UBERON:0006601,1.23e-09,95;UBERON:0002619,2.54e-09,17;UBERON:0002780,4.33e-09,39;UBERON:0001890,4.33e-09,39;UBERON:0006240,4.33e-09,39;UBERON:0002021,1.24e-08,10;UBERON:0000411,1.24e-08,10;UBERON:0001950,1.24e-08,10;UBERON:0000956,1.43e-07,21;UBERON:0001869,1.43e-07,21;UBERON:0000203,1.43e-07,21|phase1_expression=1.12104192973356,2.09385244583617,0.454999239389536,0.30246421130683,1.50268718983904,0.839396359559449,0.467225281191051,0.129123323441576,0,0,0.34243593645101,0,0.342401459862411,0.0874204024189974,0.999329285446988,0.202475267389826,0,0.788655413395594,1.23402990245165,1.69755860719212,3.74190476664707,0.297872853602656,0.522399578277871,0.47997726838022,0.22940928106717,2.8711598205751,0.86152399231815,0.430942465371778,0.380046838912748,1.51218077855958,0.886922042621219,0,0,0,0,0.332469290716985,1.22501613757421,1.25559489221072,0.7813353445238,1.0470474879476,1.17646297606203,1.36609096991689,0.485510353031154,1.25896817975577,0.506884656097573,0.550640256485045,0,0.872100625521786,1.09843091367236,2.3331587888914,0.839918529752175,0,0.167782606057736,0,0,0.514518872071894,0.85960031981627,0.515672092277442,1.21389876515759,0,0.633831403506179,0.677689064138264,0,0.449949858640699,0.988866362566974,0.7104801149461,2.69640099466564,0.768436610643109,0.725827286159344,0.540023753326763,0.841299845405528,4.57041575046086,2.20868540951614,1.46988959057945,1.82106394934649,0,9.91042928994498,15.4501679083077,10.5988507946808,1.84640802822271,1.00636407962651,2.6045668527838,10.3297709630511,8.4414391504752,14.515833538797,3.53554302568401,3.41692033917847,1.3047961207771,1.06016670666458,0.906858721281426,0.869593466105033,3.44169550792555,0.679971333707751,1.07940638327563,0.649776417447669,0.896053774194671,2.94933282276679,1.02258193546835,1.29893002301434,1.41335829804136,0.845060518660083,0,0,7.11066703153331,0.649473123033642,0.253359865475099,0,1.02765491747154,0.517875767294343,1.1875371125186,0.693941307064543,0.608930956624282,0.461230994512117,0.452167921657868,0.823120949949934,0.753999547978053,0.247194967734374,1.01219549843938,1.76922110389975,0.970601099684455,1.98757366614354,0.484875253135222,0,4.9772735491963,3.35114730901528,1.53274233125155,0.11981512450592,0.599902730993408,0.254140454146129,17.0761328921498,13.7250180845588,8.67015029578764,23.1186345855728,17.6443665557928,18.90871205492,16.5486088329113,0.81471491080253,0.746441823660558,2.77995034277042,3.36706969418358,0.520481771850815,0,1.80062129805349,1.35634336052144,1.49680298132921,0.896796041993948,1.78033276663485,3.62184719034622,0,0,0.175951124163949,0.43839146485515,1.11218899690239,1.0447564995665,1.02891068203972,0.199034266818493,0,1.02939162845886,0.568326998791185,0.621377317606506,0.703578179943289,0.720248245844059,1.42046841351126,0.787056926989615,0.462801338662135,2.09280550275367,1.3413670069981,2.21854150497622,2.13927804887525,1.64167464079095,3.08061476274252,3.21639972335731,2.41505126820156,2.68412837520744,19.3466752678997,5.76265829323993,0.991256348951394,0.2644505666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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66834 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CQR4 | |||
|association_with_transcript=-71bp_to_ENSMUST00000006900_5end | |||
|cluster_id=chr13:24923457..24923508,- | |||
|description=CAGE_peak_3_at_Acot13_5end | |||
|id=chr13:24923457..24923508,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.12e-12!63;UBERON:0001049!3.61e-12!52;UBERON:0005068!3.61e-12!52;UBERON:0006241!3.61e-12!52;UBERON:0007135!3.61e-12!52;UBERON:0000955!8.41e-12!50;UBERON:0006238!8.41e-12!50;UBERON:0002020!8.51e-12!34;UBERON:0002616!2.64e-11!49;UBERON:0002791!6.20e-10!29;UBERON:0003528!6.20e-10!29;UBERON:0001893!6.20e-10!29;UBERON:0002346!9.70e-10!71;UBERON:0003075!9.70e-10!71;UBERON:0007284!9.70e-10!71;UBERON:0001017!2.89e-09!73;UBERON:0005743!2.89e-09!73;UBERON:0000073!3.30e-09!75;UBERON:0001016!3.30e-09!75;UBERON:0003056!4.88e-09!49;UBERON:0003080!9.45e-09!40;UBERON:0002780!3.20e-08!39;UBERON:0001890!3.20e-08!39;UBERON:0006240!3.20e-08!39;UBERON:0004121!9.59e-08!102;UBERON:0000924!9.59e-08!102;UBERON:0006601!9.59e-08!102;UBERON:0002619!1.33e-07!17;UBERON:0002021!1.72e-07!10;UBERON:0000411!1.72e-07!10;UBERON:0001950!1.72e-07!10;UBERON:0004111!5.85e-07!122;UBERON:0000956!8.53e-07!21;UBERON:0001869!8.53e-07!21;UBERON:0000203!8.53e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.45e-15,54;UBERON:0001049,8.57e-14,52;UBERON:0005068,8.57e-14,52;UBERON:0006241,8.57e-14,52;UBERON:0007135,8.57e-14,52;UBERON:0002020,1.69e-13,34;UBERON:0002346,3.94e-13,64;UBERON:0003075,3.94e-13,64;UBERON:0007284,3.94e-13,64;UBERON:0000955,1.67e-11,47;UBERON:0006238,1.67e-11,47;UBERON:0003528,2.76e-11,29;UBERON:0002791,2.76e-11,29;UBERON:0001893,2.76e-11,29;UBERON:0002616,6.07e-11,46;UBERON:0010314,6.49e-11,92;UBERON:0001017,7.75e-11,73;UBERON:0010371,1.44e-10,73;UBERON:0001016,1.84e-10,75;UBERON:0003056,4.66e-10,49;UBERON:0003080,1.04e-09,40;UBERON:0004121,1.23e-09,95;UBERON:0000924,1.23e-09,95;UBERON:0006601,1.23e-09,95;UBERON:0002619,2.54e-09,17;UBERON:0002780,4.33e-09,39;UBERON:0001890,4.33e-09,39;UBERON:0006240,4.33e-09,39;UBERON:0002021,1.24e-08,10;UBERON:0000411,1.24e-08,10;UBERON:0001950,1.24e-08,10;UBERON:0000956,1.43e-07,21;UBERON:0001869,1.43e-07,21;UBERON:0000203,1.43e-07,21 | |||
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| |||
|short_description=p3@Acot13 | |||
}} |
Revision as of 20:21, 5 August 2015
Short description: | p3@Acot13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Acot13_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -71bp_to_ENSMUST00000006900_5end |
EntrezGene: | 66834 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.45e-15 | 54 |
neural tube | 8.57e-14 | 52 |
neural rod | 8.57e-14 | 52 |
future spinal cord | 8.57e-14 | 52 |
neural keel | 8.57e-14 | 52 |
gray matter | 1.69e-13 | 34 |
neurectoderm | 3.94e-13 | 64 |
neural plate | 3.94e-13 | 64 |
presumptive neural plate | 3.94e-13 | 64 |
brain | 1.67e-11 | 47 |
future brain | 1.67e-11 | 47 |
brain grey matter | 2.76e-11 | 29 |
regional part of telencephalon | 2.76e-11 | 29 |
telencephalon | 2.76e-11 | 29 |
regional part of brain | 6.07e-11 | 46 |
structure with developmental contribution from neural crest | 6.49e-11 | 92 |
central nervous system | 7.75e-11 | 73 |
ecto-epithelium | 1.44e-10 | 73 |
nervous system | 1.84e-10 | 75 |
pre-chordal neural plate | 4.66e-10 | 49 |
anterior neural tube | 1.04e-09 | 40 |
ectoderm-derived structure | 1.23e-09 | 95 |
ectoderm | 1.23e-09 | 95 |
presumptive ectoderm | 1.23e-09 | 95 |
regional part of cerebral cortex | 2.54e-09 | 17 |
regional part of forebrain | 4.33e-09 | 39 |
forebrain | 4.33e-09 | 39 |
future forebrain | 4.33e-09 | 39 |
occipital lobe | 1.24e-08 | 10 |
visual cortex | 1.24e-08 | 10 |
neocortex | 1.24e-08 | 10 |
cerebral cortex | 1.43e-07 | 21 |
cerebral hemisphere | 1.43e-07 | 21 |
pallium | 1.43e-07 | 21 |