FFCP PHASE1:Hg19::chr5:142000883..142000915,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3665 | |||
|TSSclassifier=not | |||
|UniProt=P05230 | |||
|association_with_transcript=0bp_to_ENST00000359370,NM_001144892,uc003lmm.2_5end | |||
|description=CAGE_peak_4_at_FGF1_5end | |||
|id=chr5:142000883..142000915,- | |||
|ontology_enrichment_celltype=CL:0000055!3.26e-41!180;CL:0000057!7.95e-29!75;CL:0000680!6.57e-18!57;CL:0000056!6.57e-18!57;CL:0000355!6.57e-18!57;CL:0000222!8.69e-18!119;CL:0000144!2.20e-17!625;CL:0000187!1.34e-16!54;CL:0000548!2.52e-16!679;CL:0000004!2.52e-16!679;CL:0000255!2.52e-16!679;CL:0000183!4.57e-16!59;CL:0000192!7.45e-16!42;CL:0000514!7.45e-16!42;CL:0000012!7.55e-16!682;CL:0000393!7.24e-14!60;CL:0000211!7.24e-14!60;CL:0002371!9.39e-14!591;CL:0000048!2.30e-13!430;CL:0002620!4.38e-13!23;CL:0000723!9.67e-13!436;CL:0000359!5.19e-12!32;CL:0000003!1.11e-11!722;CL:0000034!1.53e-11!444;CL:0000077!4.10e-09!19;CL:0000220!8.67e-09!246;CL:0002321!1.76e-08!248;CL:0000499!2.26e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.86e-15;23!CL:0000057;8.49e-14;73!CL:0002320;6.40e-09;188!CL:0000077;1.80e-08;19!CL:0002334;2.07e-08;12!CL:0000359;2.13e-08;32!CL:0000134;4.50e-08;55!CL:0000723;6.96e-08;61!CL:0000192;8.01e-08;43!CL:0000048;1.22e-07;58!CL:0002556;4.36e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.48e-31,76;CL:0000048,2.31e-18,427;CL:0000723,1.46e-17,433;CL:0000034,1.56e-16,441;CL:0002620,1.36e-15,23;CL:0000680,1.56e-11,58;CL:0000056,1.56e-11,58;CL:0000355,1.56e-11,58;CL:0000192,3.36e-11,43;CL:0000514,3.36e-11,43;CL:0000222,4.90e-11,121;CL:0000187,8.87e-11,55;CL:0000134,8.59e-10,354;CL:0002320,4.33e-09,361;CL:0000359,6.51e-09,32;CL:0000393,7.30e-09,61;CL:0000211,7.30e-09,61;CL:0002334,1.63e-08,12;CL:0000077,1.87e-08,19;CL:0000219,8.97e-08,386;CL:0002556,4.20e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;8.01e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.28e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.07e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.79e-23!83;UBERON:0002329!2.79e-23!83;UBERON:0003077!2.79e-23!83;UBERON:0003059!2.79e-23!83;UBERON:0007282!2.79e-23!83;UBERON:0009618!2.79e-23!83;UBERON:0007285!2.79e-23!83;UBERON:0004290!4.53e-20!70;UBERON:0005256!1.97e-18!143;UBERON:0000486!6.70e-18!82;UBERON:0001134!1.54e-15!61;UBERON:0002036!1.54e-15!61;UBERON:0003082!1.54e-15!61;UBERON:0002385!1.75e-14!63;UBERON:0001015!1.75e-14!63;UBERON:0000383!1.75e-14!63;UBERON:0002100!2.11e-12!216;UBERON:0002199!1.26e-11!45;UBERON:0002416!1.26e-11!45;UBERON:0000475!9.84e-11!365;UBERON:0002097!2.37e-10!40;UBERON:0003102!6.49e-10!95;UBERON:0000490!2.77e-08!138;UBERON:0002049!4.96e-08!79;UBERON:0007798!4.96e-08!79;UBERON:0001637!7.37e-08!42;UBERON:0003509!7.37e-08!42;UBERON:0004572!7.37e-08!42;UBERON:0000119!9.14e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.79e-09;41!UBERON:0002384;1.26e-08;198!UBERON:0002199;2.32e-08;46!UBERON:0002416;2.32e-08;46!UBERON:0003102;2.47e-07;50!UBERON:0001758;4.36e-07;6!UBERON:0003672;4.36e-07;6!UBERON:0002067;4.75e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,9.16e-15,73;UBERON:0002329,1.41e-14,71;UBERON:0003059,1.41e-14,71;UBERON:0007282,1.41e-14,71;UBERON:0004290,1.41e-14,71;UBERON:0009618,1.41e-14,71;UBERON:0003077,3.34e-14,72;UBERON:0007285,3.34e-14,72;UBERON:0007503,5.22e-13,78;UBERON:0002199,1.00e-12,46;UBERON:0002416,1.00e-12,46;UBERON:0000486,3.41e-12,83;UBERON:0002097,1.37e-11,41;UBERON:0003102,3.41e-11,99;UBERON:0005256,2.49e-10,122;UBERON:0001134,3.52e-10,62;UBERON:0002036,3.52e-10,62;UBERON:0003082,3.52e-10,62;UBERON:0002384,6.41e-10,371;UBERON:0002385,1.42e-09,64;UBERON:0001015,1.42e-09,64;UBERON:0000383,1.42e-09,64;UBERON:0002100,2.93e-07,199;UBERON:0000490,3.76e-07,148;UBERON:0001758,4.20e-07,6;UBERON:0003672,4.20e-07,6;UBERON:0002067,4.56e-07,9;UBERON:0004016,4.56e-07,9;UBERON:0010083,4.56e-07,9 | |||
|phase1_expression=3.45188920614058,4.71021152560163,1.69145284915165,6.00439790118782,3.12872766099101,3.48935409640147,2.53299878168311,0.631719873426831,0,3.93174298402414,2.09340350391728,0.218441372130172,0,0,0,0,0.602694528023977,0,1.95173119516203,0.861847406537515,0.408001382488506,0,0,0.684372125364421,1.88313959392204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,2.53007406669196,3.00802746381534,1.59331170856906,1.5905718941022,0.486634870302636,0.661743720148475,2.4390233720882,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0.33472061276467,0,0.760272105718513,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,3.97577561356255,2.27934920996244,1.05927344650575,0,0.709336764396714,2.80338800071154,2.1349799145941,2.22000793575444,0.311211035399766,0.404132016209064,0.326923806226917,0.151357427644931,0,0.937285727335186,0.624320153660641,1.1409436430889,1.34503812496621,1.87895197830024,3.39933183173076,2.80901613404497,1.42907919878425,2.33385202892359,0.206651562351531,8.31602000097437,2.96720315134268,6.37112953356618,0.718618141816238,2.35670559535693,1.37630371859161,2.49357703935765,6.58466431321257,17.4698043605441,4.95785594391769,2.26864366320042,2.15267562826634,6.83383644219416,4.23863802319124,3.00091096084402,6.28620428354477,2.57640540045629,5.58350568994769,1.85653965465393,2.72823614451356,2.52433774244115,3.40584624976508,0.969876340912871,2.4850671476163,5.33986120606493,5.4259389539356,0,0.818238361772504,0,0,0,0,0,0,0,6.25798129319264,6.43240938192885,4.14404764057442,0.464367928031979,2.88751792667834,0.118306800039844,0,0,0,0,0,0,0,0,0,4.20725321410337,3.2925920906512,1.47008711385542,0,0,0,0,0,1.02940686179115,0,0,0.301586917234893,0,0,1.03993478527958,2.88662684050547,0.115930404975077,0.939269553886573,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,1.34385702559088,0.567100388969546,0.179117045405697,0.290633938513962,1.53353071666084,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,7.40065156679381,0.87192013766656,6.7471222955274,0.775630294546667,0,5.917119267892,2.92531928243358,4.16029747645464,1.28603687131071,0,1.5985330740966,1.85871391755592,0,1.64648067356154,5.86325131728723,1.77695974371273,0,9.64606006590676,8.71533458600294,14.09619175667,0,0,0,14.1378664740034,0,0,3.90909528002464,1.43833425785268,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,5.61521326133179,6.60187258549499,6.15039418632345,5.97421216462837,2.10662269809403,0,0,4.64957918974806,2.02806085395873,2.69339204851057,0.587403472388222,0.343143423810856,0,0,0,0,0,0.30239029332968,1.98486246255021,1.99500565274481,2.80660094433074,1.15325234330131,4.09365799253363,2.0911009748669,0,2.7757744884478,3.55123450626254,1.64254312027618,1.03850885836724,3.02146983995894,0,0,0,1.37777337797528,2.73136752010076,0.131124414959424,0.451199612907412,0.385076685522074,0.784349769176855,0,0.316654886678627,0,0,0.431831832204279,0,0.812839312631559,0,1.52925763827023,0,0.895499018888713,0,0,1.28225062558195,0.656029291399411,0,0,0,0,0.574265537996172,0,3.21367859688319,0.676695028044854,1.23238893691716,0.767518373630648,3.99726060205139,0.214840489736547,1.0151168573996,1.02271952899321,0.445160178233687,0,0,0,0,3.71876439437829,0.62962469366128,0.6970372701606,1.84820148105653,0.532306030317022,0,1.48259375283136,2.00374841438788,2.232950216158,3.16379424718726,8.38772853264829,2.04718233049067,0,0.318203247925937,0.78494864019923,6.65528093058265,2.19629623788844,2.5918728516051,2.83055474202642,1.58510321173008,2.10629228119491,0.48763373908959,0.487426979262569,2.11300293513511,1.63799893689583,0.141405431953713,2.26016233240486,0.551365343546124,3.3171948762061,1.75380354101505,0.578775534266688,1.31178950409327,6.69604243976923,6.8161169581945,5.07052084558035,0.573645408816206,1.57198465620994,6.06340787518125,1.41904425628239,1.05553817648832,0.987884678879706,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0.222617410045812,0,0,1.59398390600856,0,0,0,0,23.0169294869738,0.179736702294654,0,0,0,0,14.4478087188028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0.0897576444097721,0,0.31900115973192,9.89254008740113,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.832048038078832,0,0,1.04471047896483,0,2.23581842213102,0,0,0,0,0,0,0.959293472527256,0.993573058514948,0,0,0.881747022766871,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0.543616824294456,0.313808538937,0,0.288950589901519,0,0.136905378891993,0,3.0083580899397,0,0,0,0,0,0,0,0.0671834724867263,15.132595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| |||
|short_description=p4@FGF1 | |||
}} |
Revision as of 07:58, 22 January 2014
Short description: | p4@FGF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FGF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359370, NM_001144892, uc003lmm.2_5end |
EntrezGene: | FGF1 |
HGNC: | 3665 |
UniProt: | P05230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.48e-31 | 76 |
multi fate stem cell | 2.31e-18 | 427 |
somatic stem cell | 1.46e-17 | 433 |
stem cell | 1.56e-16 | 441 |
skin fibroblast | 1.36e-15 | 23 |
muscle precursor cell | 1.56e-11 | 58 |
myoblast | 1.56e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.56e-11 | 58 |
smooth muscle cell | 3.36e-11 | 43 |
smooth muscle myoblast | 3.36e-11 | 43 |
mesodermal cell | 4.90e-11 | 121 |
muscle cell | 8.87e-11 | 55 |
mesenchymal cell | 8.59e-10 | 354 |
connective tissue cell | 4.33e-09 | 361 |
vascular associated smooth muscle cell | 6.51e-09 | 32 |
electrically responsive cell | 7.30e-09 | 61 |
electrically active cell | 7.30e-09 | 61 |
preadipocyte | 1.63e-08 | 12 |
mesothelial cell | 1.87e-08 | 19 |
motile cell | 8.97e-08 | 386 |
fibroblast of periodontium | 4.20e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 9.16e-15 | 73 |
somite | 1.41e-14 | 71 |
presomitic mesoderm | 1.41e-14 | 71 |
presumptive segmental plate | 1.41e-14 | 71 |
dermomyotome | 1.41e-14 | 71 |
trunk paraxial mesoderm | 1.41e-14 | 71 |
paraxial mesoderm | 3.34e-14 | 72 |
presumptive paraxial mesoderm | 3.34e-14 | 72 |
epithelial vesicle | 5.22e-13 | 78 |
integument | 1.00e-12 | 46 |
integumental system | 1.00e-12 | 46 |
multilaminar epithelium | 3.41e-12 | 83 |
skin of body | 1.37e-11 | 41 |
surface structure | 3.41e-11 | 99 |
trunk mesenchyme | 2.49e-10 | 122 |
skeletal muscle tissue | 3.52e-10 | 62 |
striated muscle tissue | 3.52e-10 | 62 |
myotome | 3.52e-10 | 62 |
connective tissue | 6.41e-10 | 371 |
muscle tissue | 1.42e-09 | 64 |
musculature | 1.42e-09 | 64 |
musculature of body | 1.42e-09 | 64 |
trunk | 2.93e-07 | 199 |
unilaminar epithelium | 3.76e-07 | 148 |
periodontium | 4.20e-07 | 6 |
dentition | 4.20e-07 | 6 |
dermis | 4.56e-07 | 9 |
dermatome | 4.56e-07 | 9 |
future dermis | 4.56e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.07e-08 | 14 |