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FFCP PHASE1:Mm9::chr17:31194685..31194694,+: Difference between revisions

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{{FFCP|EntrezGene=11307|HGNC=|MCL_coexpression_id=2202|UniProt=|association_with_transcript=-24bp_to_ENSMUST00000139013_5end|description=CAGE_peak_3_at_Abcg1_5end|id=chr17:31194685..31194694,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.26e-17!86;UBERON:0000153!1.04e-15!94;UBERON:0000033!8.56e-13!63;UBERON:0000955!5.63e-12!50;UBERON:0006238!5.63e-12!50;UBERON:0002616!1.78e-11!49;UBERON:0001049!4.70e-11!52;UBERON:0005068!4.70e-11!52;UBERON:0006241!4.70e-11!52;UBERON:0007135!4.70e-11!52;UBERON:0003056!8.50e-10!49;UBERON:0003080!1.72e-09!40;UBERON:0001017!3.31e-09!73;UBERON:0005743!3.31e-09!73;UBERON:0000477!3.43e-09!154;UBERON:0002780!4.10e-09!39;UBERON:0001890!4.10e-09!39;UBERON:0006240!4.10e-09!39;UBERON:0002346!6.47e-09!71;UBERON:0003075!6.47e-09!71;UBERON:0007284!6.47e-09!71;UBERON:0000073!1.89e-08!75;UBERON:0001016!1.89e-08!75;UBERON:0004121!1.03e-07!102;UBERON:0000924!1.03e-07!102;UBERON:0006601!1.03e-07!102;UBERON:0000475!1.41e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.01e-16,54;UBERON:0001049,1.92e-14,52;UBERON:0005068,1.92e-14,52;UBERON:0006241,1.92e-14,52;UBERON:0007135,1.92e-14,52;UBERON:0000955,4.32e-14,47;UBERON:0006238,4.32e-14,47;UBERON:0002346,1.10e-13,64;UBERON:0003075,1.10e-13,64;UBERON:0007284,1.10e-13,64;UBERON:0001017,1.71e-13,73;UBERON:0002616,1.96e-13,46;UBERON:0001016,1.12e-12,75;UBERON:0003056,1.55e-12,49;UBERON:0003080,5.86e-12,40;UBERON:0004121,6.71e-12,95;UBERON:0000924,6.71e-12,95;UBERON:0006601,6.71e-12,95;UBERON:0010371,1.85e-11,73;UBERON:0002780,1.87e-11,39;UBERON:0001890,1.87e-11,39;UBERON:0006240,1.87e-11,39;UBERON:0010314,1.43e-07,92;UBERON:0002020,1.97e-07,34;UBERON:0000483,2.69e-07,174;UBERON:0000119,5.82e-07,176;UBERON:0003528,6.61e-07,29;UBERON:0002791,6.61e-07,29;UBERON:0001893,6.61e-07,29;UBERON:0007811,7.33e-07,36;UBERON:0002390,9.44e-07,45;UBERON:0003061,9.44e-07,45|phase1_expression=1.44133962394315,0,0.454999239389536,0,0,0,0,4.64843964389675,1.40788722151667,2.80877431586392,0.856089841127525,0.638177271962691,4.28001824828014,3.84649770643589,0.666219523631325,1.01237633694913,0,3.62781490161973,1.91960207048034,2.54633791078818,1.27564935226605,1.19149141441062,0.783599367416806,0.159992422793407,0.45881856213434,0,0.86152399231815,0,0,0.252030129759931,0,1.27006134691926,0.61506478758457,0,0,0,0,1.25559489221072,0.7813353445238,0,2.35292595212406,0,0.971020706062307,0,0,0,0,0,0,0,0,0,2.51673909086605,5.07753499407941,2.01656279485478,0.514518872071894,0,0.515672092277442,2.02316460859598,2.64495489636016,1.26766280701236,0.338844532069132,0,1.3498495759221,2.96659908770092,2.1314403448383,2.69640099466564,0.768436610643109,1.14058573539325,0.945041568321835,0.210324961351382,1.14260393761521,1.54607978666129,0.979926393719632,1.0543001812006,0,4.40463523997555,3.31987079021488,3.99376986466233,1.71452174049252,1.18933936683133,1.04182674111352,2.23346399201105,6.19038871034848,2.44477196442896,1.47314292736834,0.854230084794618,1.1183966749518,0.227178579999552,0.0755715601067855,2.6087803983151,1.72084775396277,0,0,0,0,0.842666520790511,0,0,0,1.69012103732017,0,0,0,0,0,0,0.45673551887624,1.55362730188303,0.890652834388949,1.04091196059682,0,0.230615497256059,0.452167921657868,0.587943535678524,0.628332956648377,1.97755974187499,0.722996784599558,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,4.09893115816166,5.02672096352292,0.255457055208591,2.15667224110656,3.59941638596045,0.635351135365324,2.24685959107234,5.49000723382352,1.7591609295801,4.17178368461463,4.34716277461562,3.94797284663164,3.56930778749067,0.203678727700633,0.870848794270651,1.0108910337347,0.841767423545896,0,1.14951052216736,1.26043490863744,0.150704817835715,2.17716797284249,1.2811372028485,1.87403449119458,2.84573707812917,0.431135985865684,0.378212160335639,0.175951124163949,0,0.834141747676794,1.0447564995665,0.205782136407943,0.398068533636986,0,0.772043721344145,0,0.207125772535502,0,0.720248245844059,0.710234206755631,0.590292695242212,0.462801338662135,0.697601834251224,1.07309360559848,1.05088808130453,0.329119699826961,0.492502392237286,1.05389452409612,0.438599962275997,0.219550115291051,0.805238512562231,3.15434922846191,1.13195073617213,0,0.264450566663544,0,0.464473343720877,0,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.397912944082302,0.58489226135736,0,0.432276099749388,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.775809948670503,0.280543279561274,0.632365371242573,1.03327103585722,0.627994911365499,0.863780147452604,0.592905254174298,0.166845105716094,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,1.52775511068852,0.575392274901621,0.972811360650212,0.823684239564244,0,1.11642284300551,1.87222603868736,0,0.179397413521912,0,1.29327233116623,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,1.17254380209271,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11307
|HGNC=
|MCL_coexpression_id=2202
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-24bp_to_ENSMUST00000139013_5end
|cluster_id=chr17:31194685..31194694,+
|description=CAGE_peak_3_at_Abcg1_5end
|id=chr17:31194685..31194694,+
|ontology_enrichment_celltype=
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|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.01e-16,54;UBERON:0001049,1.92e-14,52;UBERON:0005068,1.92e-14,52;UBERON:0006241,1.92e-14,52;UBERON:0007135,1.92e-14,52;UBERON:0000955,4.32e-14,47;UBERON:0006238,4.32e-14,47;UBERON:0002346,1.10e-13,64;UBERON:0003075,1.10e-13,64;UBERON:0007284,1.10e-13,64;UBERON:0001017,1.71e-13,73;UBERON:0002616,1.96e-13,46;UBERON:0001016,1.12e-12,75;UBERON:0003056,1.55e-12,49;UBERON:0003080,5.86e-12,40;UBERON:0004121,6.71e-12,95;UBERON:0000924,6.71e-12,95;UBERON:0006601,6.71e-12,95;UBERON:0010371,1.85e-11,73;UBERON:0002780,1.87e-11,39;UBERON:0001890,1.87e-11,39;UBERON:0006240,1.87e-11,39;UBERON:0010314,1.43e-07,92;UBERON:0002020,1.97e-07,34;UBERON:0000483,2.69e-07,174;UBERON:0000119,5.82e-07,176;UBERON:0003528,6.61e-07,29;UBERON:0002791,6.61e-07,29;UBERON:0001893,6.61e-07,29;UBERON:0007811,7.33e-07,36;UBERON:0002390,9.44e-07,45;UBERON:0003061,9.44e-07,45
|phase1_expression=1.44133962394315,0,0.454999239389536,0,0,0,0,4.64843964389675,1.40788722151667,2.80877431586392,0.856089841127525,0.638177271962691,4.28001824828014,3.84649770643589,0.666219523631325,1.01237633694913,0,3.62781490161973,1.91960207048034,2.54633791078818,1.27564935226605,1.19149141441062,0.783599367416806,0.159992422793407,0.45881856213434,0,0.86152399231815,0,0,0.252030129759931,0,1.27006134691926,0.61506478758457,0,0,0,0,1.25559489221072,0.7813353445238,0,2.35292595212406,0,0.971020706062307,0,0,0,0,0,0,0,0,0,2.51673909086605,5.07753499407941,2.01656279485478,0.514518872071894,0,0.515672092277442,2.02316460859598,2.64495489636016,1.26766280701236,0.338844532069132,0,1.3498495759221,2.96659908770092,2.1314403448383,2.69640099466564,0.768436610643109,1.14058573539325,0.945041568321835,0.210324961351382,1.14260393761521,1.54607978666129,0.979926393719632,1.0543001812006,0,4.40463523997555,3.31987079021488,3.99376986466233,1.71452174049252,1.18933936683133,1.04182674111352,2.23346399201105,6.19038871034848,2.44477196442896,1.47314292736834,0.854230084794618,1.1183966749518,0.227178579999552,0.0755715601067855,2.6087803983151,1.72084775396277,0,0,0,0,0.842666520790511,0,0,0,1.69012103732017,0,0,0,0,0,0,0.45673551887624,1.55362730188303,0.890652834388949,1.04091196059682,0,0.230615497256059,0.452167921657868,0.587943535678524,0.628332956648377,1.97755974187499,0.722996784599558,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,4.09893115816166,5.02672096352292,0.255457055208591,2.15667224110656,3.59941638596045,0.635351135365324,2.24685959107234,5.49000723382352,1.7591609295801,4.17178368461463,4.34716277461562,3.94797284663164,3.56930778749067,0.203678727700633,0.870848794270651,1.0108910337347,0.841767423545896,0,1.14951052216736,1.26043490863744,0.150704817835715,2.17716797284249,1.2811372028485,1.87403449119458,2.84573707812917,0.431135985865684,0.378212160335639,0.175951124163949,0,0.834141747676794,1.0447564995665,0.205782136407943,0.398068533636986,0,0.772043721344145,0,0.207125772535502,0,0.720248245844059,0.710234206755631,0.590292695242212,0.462801338662135,0.697601834251224,1.07309360559848,1.05088808130453,0.329119699826961,0.492502392237286,1.05389452409612,0.438599962275997,0.219550115291051,0.805238512562231,3.15434922846191,1.13195073617213,0,0.264450566663544,0,0.464473343720877,0,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.397912944082302,0.58489226135736,0,0.432276099749388,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.775809948670503,0.280543279561274,0.632365371242573,1.03327103585722,0.627994911365499,0.863780147452604,0.592905254174298,0.166845105716094,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,1.52775511068852,0.575392274901621,0.972811360650212,0.823684239564244,0,1.11642284300551,1.87222603868736,0,0.179397413521912,0,1.29327233116623,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,1.17254380209271,1.19021820443007,2.34160377429359,0.945810864637146,1.99318220683897,2.71073106717728,2.13022309130459,1.20879487306127,1.59113964439663,16.5870412333199,7.61467957346193,0,0.551873492609465,2.72936002979246,2.69586879162067,0,0.757412781613119,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0,0.584511715822624,0.395287777946524,3.21321316421807,1.13552068166615,0.178065603667255,1.30309567482861,0.659880491890142,0,0,0.906970670894253,0.377210159511796,0.590603785761546,0.307435147943927,0.258428293168221,1.45413491791002,0,1.26414703174326,1.05418608574999,0,2.7235168460303,1.08036656418786,1.29358683782755,1.28602221018955,2.48276327099183,1.96205699362278,2.79733335023606,2.74018454203139,0.23467170806371,3.60114520468494,0.441056796109924,0.8244312647074,0.484393280087717,0.603129249281559,0.358117032009409,0.328281799490123,0.874442509889552,2.03967832211561,1.36696704638282,0.619160603889667,0.370389054739423,0.565105371014073,0.410082683163076,1.37266903923914,3.39956859987711,3.07893195112048,4.28419918793714,0.954670618015114,0.158167996790568,0,0.324016022465404,1.04544148007234,0.655087691238533,0.674321731924103,0.330613822901344,0.26175594198403,0.259229946583586,1.24267862617385,0,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,0.675824501963113,0.821500670520278,0.5208175393758,0.943734099831398,0.241584120826006,0,3.16011120628178,0.608175645870493,0.924398614483445,2.20865399062252,1.43221356533985,2.18549490259391,1.9231271923195,1.77227432609493,1.81739609906666,2.51482461961499,3.52891647978942,5.55509920216589,3.75226182397285,7.24636793525727,0.453460767230423,0,0.0897138566094757,0,1.35232715822533,0.375364950902364,0.549454872801795,1.2862102744744,0,1.6942555278512,2.30162618253588,1.14579102687879,3.09335728218638,2.05524755931193,2.2661816921691,2.02506750069542,4.05289082901798,0.906284817968409,5.1776031175182,0.31136204275253,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.735374033800057,0.222246727801615,0.824140228955577,0.320919209591815,1.01078884705519,0,0.565879024158229,0.468207537349412,0.448176066834085,0.516919220600519,0.952587382566147,0.463537303779422,0.578727661391115,0.412085900803307,0.294397840268795,0,1.06485483695602,0.953744759789284,0.726732083161643,0.752875043322645,0.338458431566706,0.73171189149109,0.263069711437843,0.679020569229309,1.12228454331548,1.06771516311757,0.29551344712669,0.818462086339379,0.309873682371932,0.578719832943424,0.249810577937946,0.701794825336225,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843
|short_description=p3@Abcg1
}}

Revision as of 14:32, 4 August 2015

Short description:p3@Abcg1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Abcg1_5end
Coexpression cluster:MCL_coexpression_mm9:2202
Association with transcript: -24bp_to_ENSMUST00000139013_5end
EntrezGene:11307
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Abcg1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E43.53
thymus, neonate N20.CNhs11186.820-7A25.56
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G27.25
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.01e-1654
neural tube1.92e-1452
neural rod1.92e-1452
future spinal cord1.92e-1452
neural keel1.92e-1452
brain4.32e-1447
future brain4.32e-1447
neurectoderm1.10e-1364
neural plate1.10e-1364
presumptive neural plate1.10e-1364
central nervous system1.71e-1373
regional part of brain1.96e-1346
nervous system1.12e-1275
pre-chordal neural plate1.55e-1249
anterior neural tube5.86e-1240
ectoderm-derived structure6.71e-1295
ectoderm6.71e-1295
presumptive ectoderm6.71e-1295
ecto-epithelium1.85e-1173
regional part of forebrain1.87e-1139
forebrain1.87e-1139
future forebrain1.87e-1139
structure with developmental contribution from neural crest1.43e-0792
gray matter1.97e-0734
epithelium2.69e-07174
cell layer5.82e-07176
brain grey matter6.61e-0729
regional part of telencephalon6.61e-0729
telencephalon6.61e-0729
craniocervical region7.33e-0736
hematopoietic system9.44e-0745
blood island9.44e-0745
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